PI0026312 (gene) Melon (PI 482460) v1

Overview
NamePI0026312
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionF-box protein
Locationchr06: 30480264 .. 30482256 (-)
RNA-Seq ExpressionPI0026312
SyntenyPI0026312
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAGGTGTTTACGAATGATAGGGAGCCAAAGAAATTGAAGCGGAGAAGGAGGGGTTCAGGTGGGAAGTATTTGAAGCCGGGTGCTTTGGCGCAGCTCAGGTGTAGCAAGGGCTCGGTTGCTAAATCTTGTACTGATCTCGGGAGGAAGAGGGTGGCTGTGTTGGATGCTGGGAAGACGAAGAGGAATGGGGTGCTTGAGGATAAGGTTTCTGATAGAAGTCCTCTGATGTTGTCACCTGTGAAATTAGTGATGCATATAAACCACATTGGTACTCCAAAAACTCCTCGGGTTGAAGACTGTGAATCAGAGTCACGGCTGGAATCTCTACCTATGGATCTATTGGTATTGTGACTATTATACATCTCATTCTTTTCTGTTTCCTAGAAGAACCTTTTTTTTTTTATCTTAAAGTTACATCAAATGCATAAAATCGAATATTTTCTGTTTCTTTTCAAGTTGTATGGATCTTCCTTTAGGTTCCATTGTTTTTTATCAATAGGAGGCTGACTTATAGAGATCCCCAAGATAGCCTGTTATTTTAGCTGTCAGTTATGAAGCTTGCTCAGTAACTGGACGGTGGAGTTTTCGGTGGTTTTTTTTTTCATTATAGTGTCAAGCAGTTGTTTCTTGTCTTAATGAGCAGATGAAACTTTCTTGTGAGCCTTTTTATTTTGTGAGGGTATTGTTAAGGAGTATAAATGACCTACTTTTCTTTTTTCTTCTTTTGAGTTCCCAACATGTGGAGGTTTGGACTTGATCTACTTTTAGTTAATGGCCTAAACCTTTTTGCTTAGAGATGTGGTAGTCAGCAACTTTAGCTAAAACTCAGCTGTATTTTTCTTAATTACAAACCTAAAAAACCTCAGTTTTTAAACTTTAAGGGCATGTTTCACGGCATAGAAGTTTGATGCACTCATGTTGATCTAATCTGGATATTTGCTGTTGTATCCTTGTCTGTACTCTTTGAACGTTATCTTACATGTAATGGTATTTTGCAGTATTGGATATTAATGTTCTGCGTTGTTTGGCTGCTGATGTTCTGATGTTTTCCATTTGTAACTTCAAGGTGAAAATACTTTGCCATTTACACCATGACCAACTGAGGGCTGTTTTTCATGTCTCTCAACGAATCAGAAAGGCTGTAAGTCTTTTATCTGACTGCTTCAAATGCACCACAATTTTTGGATGTTGACGATCTTTGTTTTTAACAGGTTTTGCTGGCAAGGCAATTCCACTTCAATTACACAACCCCAGATCGGTCCAGGCAGGAGATGTTGAGGATAACCACCCCTCGACCTACCGAACACTGGCCCTTTGTAAAGTTAGTATTGATTTAAACCTTTCGTTTGTTTGGCATCTTTATGTTAGAGCTAAGTTACAAAAAATATCTCACTATTACTTGTTTAGAAAATAAGTAATAGTGTTCCGAACTTATTAGAATTTTGGATAAAGATTGGGCCCGGAGCAGGTGTGGCTGTGTTTGTGTTCCAAACTCTCTTTCCAAGTCACTCTCACTCATATTCAAGTTCCAATTTTTCTGGAACATTCTATTGGATTTTGATTACAATGTTAGTTTTGAAACCGGTATAAAAAATTAAGGGTAATATTGCAATTTTTGAAAAAATAATTATAATATTGAAACTTTTGAAAGAATAATTGTATTTTTAAAAGCATCTTTTAATTTTGCCTTGTCTCATTGATCTGACTCGAAACAATGATCTACAGCAAGGGAGATGGCAAAGGGTTGTCATTGCCAAGCCCTCACACTCCAAAAGCACCAAGACATGGTCCTCGTCCTCCATCTCGTCTCAAAGTTTCAGAGATGAGGCAGGTTGCTGCTGTTCTCTTTCAAGAATCAGCTTTTCCTCCAAGATGCATGGTTCCATCTGTTATATCTAAACCTCTCTGCAAATCCTTGGCCTCAAACCGGGTTCTGTTTTACGAGGACGAGTTATGCCAAGCTGTTGCTCAAAACAAACTTCGTTGA

mRNA sequence

ATGGGGAAGGTGTTTACGAATGATAGGGAGCCAAAGAAATTGAAGCGGAGAAGGAGGGGTTCAGGTGGGAAGTATTTGAAGCCGGGTGCTTTGGCGCAGCTCAGGTGTAGCAAGGGCTCGGTTGCTAAATCTTGTACTGATCTCGGGAGGAAGAGGGTGGCTGTGTTGGATGCTGGGAAGACGAAGAGGAATGGGGTGCTTGAGGATAAGGTTTCTGATAGAAGTCCTCTGATGTTGTCACCTGTGAAATTAGTGATGCATATAAACCACATTGGTACTCCAAAAACTCCTCGGGTTGAAGACTGTGAATCAGAGTCACGGCTGGAATCTCTACCTATGGATCTATTGGTGAAAATACTTTGCCATTTACACCATGACCAACTGAGGGCTGTTTTTCATGTCTCTCAACGAATCAGAAAGGCTGTTTTGCTGGCAAGGCAATTCCACTTCAATTACACAACCCCAGATCGGTCCAGGCAGGAGATGTTGAGGATAACCACCCCTCGACCTACCGAACACTGGCCCTTTGTAAACAAGGGAGATGGCAAAGGGTTGTCATTGCCAAGCCCTCACACTCCAAAAGCACCAAGACATGGTCCTCGTCCTCCATCTCGTCTCAAAGTTTCAGAGATGAGGCAGGTTGCTGCTGTTCTCTTTCAAGAATCAGCTTTTCCTCCAAGATGCATGGTTCCATCTGTTATATCTAAACCTCTCTGCAAATCCTTGGCCTCAAACCGGGTTCTGTTTTACGAGGACGAGTTATGCCAAGCTGTTGCTCAAAACAAACTTCGTTGA

Coding sequence (CDS)

ATGGGGAAGGTGTTTACGAATGATAGGGAGCCAAAGAAATTGAAGCGGAGAAGGAGGGGTTCAGGTGGGAAGTATTTGAAGCCGGGTGCTTTGGCGCAGCTCAGGTGTAGCAAGGGCTCGGTTGCTAAATCTTGTACTGATCTCGGGAGGAAGAGGGTGGCTGTGTTGGATGCTGGGAAGACGAAGAGGAATGGGGTGCTTGAGGATAAGGTTTCTGATAGAAGTCCTCTGATGTTGTCACCTGTGAAATTAGTGATGCATATAAACCACATTGGTACTCCAAAAACTCCTCGGGTTGAAGACTGTGAATCAGAGTCACGGCTGGAATCTCTACCTATGGATCTATTGGTGAAAATACTTTGCCATTTACACCATGACCAACTGAGGGCTGTTTTTCATGTCTCTCAACGAATCAGAAAGGCTGTTTTGCTGGCAAGGCAATTCCACTTCAATTACACAACCCCAGATCGGTCCAGGCAGGAGATGTTGAGGATAACCACCCCTCGACCTACCGAACACTGGCCCTTTGTAAACAAGGGAGATGGCAAAGGGTTGTCATTGCCAAGCCCTCACACTCCAAAAGCACCAAGACATGGTCCTCGTCCTCCATCTCGTCTCAAAGTTTCAGAGATGAGGCAGGTTGCTGCTGTTCTCTTTCAAGAATCAGCTTTTCCTCCAAGATGCATGGTTCCATCTGTTATATCTAAACCTCTCTGCAAATCCTTGGCCTCAAACCGGGTTCTGTTTTACGAGGACGAGTTATGCCAAGCTGTTGCTCAAAACAAACTTCGTTGA

Protein sequence

MGKVFTNDREPKKLKRRRRGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVNKGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPLCKSLASNRVLFYEDELCQAVAQNKLR
Homology
BLAST of PI0026312 vs. ExPASy Swiss-Prot
Match: Q5XF11 (F-box protein At4g35930 OS=Arabidopsis thaliana OX=3702 GN=At4g35930 PE=2 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.0e-76
Identity = 168/321 (52.34%), Postives = 201/321 (62.62%), Query Frame = 0

Query: 1   MGKVFTNDREPKK--LKRRRRGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKV   D + K    K++ + S  KYLKPGAL QL  SK S AKSC +LG+KRV V D 
Sbjct: 1   MGKVSPKDLDSKTSVRKKKLKSSSNKYLKPGALVQLCYSKASAAKSCNELGKKRVPVFDT 60

Query: 61  ------GKTK---------RNG-------------------------------------V 120
                 GK +         RN                                      V
Sbjct: 61  KSCNDLGKKRVPVFDIKHARNNKMAVEQLNSPKSPLMLSPVNVVKRSTLVRPMKFDDLQV 120

Query: 121 LEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVKILCHLHHD 180
             +    +SPLMLSP+ +VM    + TPKTP+ + C SES+LESLPMDLLVKI+CHLHHD
Sbjct: 121 ESNNTCKKSPLMLSPMGIVMQNTLLRTPKTPQADPCVSESQLESLPMDLLVKIVCHLHHD 180

Query: 181 QLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVNKGDGKGLS 240
           QL+AVFHVSQRIR A +LARQ+HFNYTTPDRSRQEMLR+ TP P   WPF  +GDG    
Sbjct: 181 QLKAVFHVSQRIRMATILARQYHFNYTTPDRSRQEMLRVMTPVPINRWPF-RRGDGNPTM 240

Query: 241 LPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQ-ESAFPPRCMVPSVISKP-LCKSLAS 264
           + SPHTPKAP+H PRPPSR K++EM+Q+ AVLFQ ++ FP RC+VPSV+ +P L K +A 
Sbjct: 241 VSSPHTPKAPKHAPRPPSRTKLAEMKQITAVLFQDQTPFPSRCIVPSVLQRPTLFKPMAP 300

BLAST of PI0026312 vs. ExPASy Swiss-Prot
Match: Q8GX77 (F-box protein At1g61340 OS=Arabidopsis thaliana OX=3702 GN=At1g61340 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-09
Identity = 29/64 (45.31%), Postives = 47/64 (73.44%), Query Frame = 0

Query: 95  KTPRVEDCESESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTT 154
           KT  V + +S   LE LP+D+LV+I+C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+T
Sbjct: 69  KTTSVAEGQSR-ELEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYST 128

Query: 155 PDRS 159
           P ++
Sbjct: 129 PRKT 131

BLAST of PI0026312 vs. ExPASy Swiss-Prot
Match: O65416 (F-box protein SKIP27 OS=Arabidopsis thaliana OX=3702 GN=SKIP27 PE=1 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 4.0e-09
Identity = 43/133 (32.33%), Postives = 71/133 (53.38%), Query Frame = 0

Query: 29  GALAQLRCSKGSVAKSCTDLGRKRVAVLDAGK--TKRNGVLEDKVSDRSPLMLSPVKLVM 88
           G   +L    GSV +    LGRKR+ +    +    R+ V    VS+  P+  S  +   
Sbjct: 51  GEEEELELGLGSV-RFTRGLGRKRILISSCVRESLSRSAVEIPVVSESPPVKSSLKRQRS 110

Query: 89  HINHIGTPKTPRVEDCESESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLAR 148
            I  + +  +        +SRLE LP DLL++++C + H+ L+++  VS+ IR+A L+A+
Sbjct: 111 RITIVSSSSS-------EKSRLECLPQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAK 170

Query: 149 QFHFNYTTPDRSR 160
             HF YTTP ++R
Sbjct: 171 TLHFAYTTPKKTR 175

BLAST of PI0026312 vs. ExPASy Swiss-Prot
Match: Q9S9T6 (F-box protein At4g05010 OS=Arabidopsis thaliana OX=3702 GN=At4g05010 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.9e-08
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0

Query: 95  KTPRVEDCES-ESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYT 154
           K P  E  ES  S LE+L  D+L+++LCH+ H+ L  +  VS+ IRKAV+ A++ HF+Y+
Sbjct: 50  KRPSHETTESCRSLLETLHQDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKKSHFDYS 109

Query: 155 TPDR 158
           TP +
Sbjct: 110 TPKK 113

BLAST of PI0026312 vs. ExPASy TrEMBL
Match: A0A5A7UEK6 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00560 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.2e-144
Identity = 262/266 (98.50%), Postives = 262/266 (98.50%), Query Frame = 0

Query: 1   MGKVFTNDREPKKLKRRRR--GSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKVFTNDREPKKLKRRRR  GSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120
           GK KRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKAKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 181 KGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKG SLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEDELCQAVAQNKLR 265
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

BLAST of PI0026312 vs. ExPASy TrEMBL
Match: A0A1S3BKS0 (F-box protein At4g35930 OS=Cucumis melo OX=3656 GN=LOC103490677 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.2e-144
Identity = 262/266 (98.50%), Postives = 262/266 (98.50%), Query Frame = 0

Query: 1   MGKVFTNDREPKKLKRRRR--GSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKVFTNDREPKKLKRRRR  GSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120
           GK KRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKAKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 181 KGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKG SLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEDELCQAVAQNKLR 265
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

BLAST of PI0026312 vs. ExPASy TrEMBL
Match: A0A0A0L111 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002650 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 9.8e-144
Identity = 261/266 (98.12%), Postives = 262/266 (98.50%), Query Frame = 0

Query: 1   MGKVFTNDREPKKLKRRRR--GSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKVFTNDREPKKLKRRRR  GSGGKYLKPGALA+LRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120
           GKTKRN VLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 181 KGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKG SLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEDELCQAVAQNKLR 265
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

BLAST of PI0026312 vs. ExPASy TrEMBL
Match: A0A6J1CW37 (F-box protein At4g35930 OS=Momordica charantia OX=3673 GN=LOC111014758 PE=4 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.5e-136
Identity = 247/265 (93.21%), Postives = 256/265 (96.60%), Query Frame = 0

Query: 1   MGKVFTNDREPKKLKRRRR--GSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKVF+NDR+ KKLKRRRR  GSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLD 
Sbjct: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60

Query: 61  GKTKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120
           GKTKRN V EDKVSD+SP+MLSPVKLVMHINHIGTP+TPRVE CESESRLESLPMDLLVK
Sbjct: 61  GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRP+EHWPFV+
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS 180

Query: 181 KGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKGL +PSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEDELCQAVAQNKL 264
           CKSLASNRVLFYE+ELCQAVAQNKL
Sbjct: 241 CKSLASNRVLFYEEELCQAVAQNKL 265

BLAST of PI0026312 vs. ExPASy TrEMBL
Match: A0A6J1FVG9 (F-box protein At4g35930 OS=Cucurbita moschata OX=3662 GN=LOC111448461 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 7.3e-131
Identity = 239/267 (89.51%), Postives = 250/267 (93.63%), Query Frame = 0

Query: 1   MGKVFTNDREPKKLKRRRR--GSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MG+ F+N+RE KKLKRRRR  GS GKYLKPGAL++LRCSKGSV KSCT LGRKRVAVLDA
Sbjct: 8   MGEAFSNERESKKLKRRRRAKGSSGKYLKPGALSKLRCSKGSVGKSCTYLGRKRVAVLDA 67

Query: 61  GKTKRNGV-LEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLV 120
           GKTKRN   LEDKVSDRSPLMLSPVKLVMHINHI TP+TPRVE CESESRLESLPMDLLV
Sbjct: 68  GKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLESLPMDLLV 127

Query: 121 KILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFV 180
           K+LCHLHHDQLRAVFHVSQRIRKAVL+ARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFV
Sbjct: 128 KVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFV 187

Query: 181 NKGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKP 240
           +KGDGKG SLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQE+ FP RCMVPSVI KP
Sbjct: 188 SKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQETGFPSRCMVPSVIPKP 247

Query: 241 LCKSLASNRVLFYEDELCQAVAQNKLR 265
           LCKSLASNRVLFYE+ELCQAVAQNKLR
Sbjct: 248 LCKSLASNRVLFYEEELCQAVAQNKLR 274

BLAST of PI0026312 vs. NCBI nr
Match: XP_008448525.1 (PREDICTED: F-box protein At4g35930 [Cucumis melo] >KAA0052947.1 F-box protein [Cucumis melo var. makuwa] >TYK11403.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 522.3 bits (1344), Expect = 2.4e-144
Identity = 262/266 (98.50%), Postives = 262/266 (98.50%), Query Frame = 0

Query: 1   MGKVFTNDREPKKLKRRRR--GSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKVFTNDREPKKLKRRRR  GSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120
           GK KRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKAKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 181 KGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKG SLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEDELCQAVAQNKLR 265
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

BLAST of PI0026312 vs. NCBI nr
Match: XP_004146154.1 (F-box protein At4g35930 [Cucumis sativus] >XP_031738005.1 F-box protein At4g35930 [Cucumis sativus] >KGN55645.1 hypothetical protein Csa_011427 [Cucumis sativus])

HSP 1 Score: 519.2 bits (1336), Expect = 2.0e-143
Identity = 261/266 (98.12%), Postives = 262/266 (98.50%), Query Frame = 0

Query: 1   MGKVFTNDREPKKLKRRRR--GSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKVFTNDREPKKLKRRRR  GSGGKYLKPGALA+LRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120
           GKTKRN VLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 181 KGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKG SLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEDELCQAVAQNKLR 265
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

BLAST of PI0026312 vs. NCBI nr
Match: XP_038903596.1 (F-box protein At4g35930 [Benincasa hispida])

HSP 1 Score: 508.4 bits (1308), Expect = 3.6e-140
Identity = 255/266 (95.86%), Postives = 260/266 (97.74%), Query Frame = 0

Query: 1   MGKVFTNDREPKKLKRRRR--GSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKVFT+DREPKKLKRRRR  GSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTSDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 61  GKTKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120
           GKTKRN VLEDKVSDRSPLMLSPVKLVMHI+HI TP+TPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHISHISTPRTPRVEDCESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFVN
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVN 180

Query: 181 KGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KG+GKGL LPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSV+SKPL
Sbjct: 181 KGEGKGLLLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVLSKPL 240

Query: 241 CKSLASNRVLFYEDELCQAVAQNKLR 265
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

BLAST of PI0026312 vs. NCBI nr
Match: XP_022145262.1 (F-box protein At4g35930 [Momordica charantia] >XP_022145263.1 F-box protein At4g35930 [Momordica charantia])

HSP 1 Score: 495.4 bits (1274), Expect = 3.1e-136
Identity = 247/265 (93.21%), Postives = 256/265 (96.60%), Query Frame = 0

Query: 1   MGKVFTNDREPKKLKRRRR--GSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKVF+NDR+ KKLKRRRR  GSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLD 
Sbjct: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60

Query: 61  GKTKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120
           GKTKRN V EDKVSD+SP+MLSPVKLVMHINHIGTP+TPRVE CESESRLESLPMDLLVK
Sbjct: 61  GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK 120

Query: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180
           ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRP+EHWPFV+
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS 180

Query: 181 KGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240
           KGDGKGL +PSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL
Sbjct: 181 KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 241 CKSLASNRVLFYEDELCQAVAQNKL 264
           CKSLASNRVLFYE+ELCQAVAQNKL
Sbjct: 241 CKSLASNRVLFYEEELCQAVAQNKL 265

BLAST of PI0026312 vs. NCBI nr
Match: XP_023538881.1 (F-box protein At4g35930 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 478.0 bits (1229), Expect = 5.2e-131
Identity = 241/267 (90.26%), Postives = 249/267 (93.26%), Query Frame = 0

Query: 1   MGKVFTNDREPKKLKRRRR--GSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MG+ F N+RE KKLKRRRR  GS GKYLKPGALA+LRCSKGSV KSCT LGRKRVAVLDA
Sbjct: 8   MGEAFLNERESKKLKRRRRTNGSSGKYLKPGALAKLRCSKGSVGKSCTYLGRKRVAVLDA 67

Query: 61  GKTKRNGV-LEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLV 120
           GKTKRN   LEDKVSDRSPLMLSPVKLVMHINHI TP+TPRVE CESESRLESLPMDLLV
Sbjct: 68  GKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLESLPMDLLV 127

Query: 121 KILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFV 180
           K+LCHLHHDQLRAVFHVSQRIRKAVL+ARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFV
Sbjct: 128 KVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFV 187

Query: 181 NKGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKP 240
           +KGDGKG SLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQES FP RCMVPSVI KP
Sbjct: 188 SKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESGFPSRCMVPSVIPKP 247

Query: 241 LCKSLASNRVLFYEDELCQAVAQNKLR 265
           LCKSLASNRVLFYE+ELCQAVAQNKLR
Sbjct: 248 LCKSLASNRVLFYEEELCQAVAQNKLR 274

BLAST of PI0026312 vs. TAIR 10
Match: AT4G35930.1 (F-box family protein )

HSP 1 Score: 288.1 bits (736), Expect = 7.1e-78
Identity = 168/321 (52.34%), Postives = 201/321 (62.62%), Query Frame = 0

Query: 1   MGKVFTNDREPKK--LKRRRRGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60
           MGKV   D + K    K++ + S  KYLKPGAL QL  SK S AKSC +LG+KRV V D 
Sbjct: 1   MGKVSPKDLDSKTSVRKKKLKSSSNKYLKPGALVQLCYSKASAAKSCNELGKKRVPVFDT 60

Query: 61  ------GKTK---------RNG-------------------------------------V 120
                 GK +         RN                                      V
Sbjct: 61  KSCNDLGKKRVPVFDIKHARNNKMAVEQLNSPKSPLMLSPVNVVKRSTLVRPMKFDDLQV 120

Query: 121 LEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVKILCHLHHD 180
             +    +SPLMLSP+ +VM    + TPKTP+ + C SES+LESLPMDLLVKI+CHLHHD
Sbjct: 121 ESNNTCKKSPLMLSPMGIVMQNTLLRTPKTPQADPCVSESQLESLPMDLLVKIVCHLHHD 180

Query: 181 QLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVNKGDGKGLS 240
           QL+AVFHVSQRIR A +LARQ+HFNYTTPDRSRQEMLR+ TP P   WPF  +GDG    
Sbjct: 181 QLKAVFHVSQRIRMATILARQYHFNYTTPDRSRQEMLRVMTPVPINRWPF-RRGDGNPTM 240

Query: 241 LPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQ-ESAFPPRCMVPSVISKP-LCKSLAS 264
           + SPHTPKAP+H PRPPSR K++EM+Q+ AVLFQ ++ FP RC+VPSV+ +P L K +A 
Sbjct: 241 VSSPHTPKAPKHAPRPPSRTKLAEMKQITAVLFQDQTPFPSRCIVPSVLQRPTLFKPMAP 300

BLAST of PI0026312 vs. TAIR 10
Match: AT1G61340.1 (F-box family protein )

HSP 1 Score: 63.9 bits (154), Expect = 2.2e-10
Identity = 29/64 (45.31%), Postives = 47/64 (73.44%), Query Frame = 0

Query: 95  KTPRVEDCESESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTT 154
           KT  V + +S   LE LP+D+LV+I+C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+T
Sbjct: 69  KTTSVAEGQSR-ELEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYST 128

Query: 155 PDRS 159
           P ++
Sbjct: 129 PRKT 131

BLAST of PI0026312 vs. TAIR 10
Match: AT4G21510.1 (F-box family protein )

HSP 1 Score: 63.5 bits (153), Expect = 2.8e-10
Identity = 43/133 (32.33%), Postives = 71/133 (53.38%), Query Frame = 0

Query: 29  GALAQLRCSKGSVAKSCTDLGRKRVAVLDAGK--TKRNGVLEDKVSDRSPLMLSPVKLVM 88
           G   +L    GSV +    LGRKR+ +    +    R+ V    VS+  P+  S  +   
Sbjct: 51  GEEEELELGLGSV-RFTRGLGRKRILISSCVRESLSRSAVEIPVVSESPPVKSSLKRQRS 110

Query: 89  HINHIGTPKTPRVEDCESESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLAR 148
            I  + +  +        +SRLE LP DLL++++C + H+ L+++  VS+ IR+A L+A+
Sbjct: 111 RITIVSSSSS-------EKSRLECLPQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAK 170

Query: 149 QFHFNYTTPDRSR 160
             HF YTTP ++R
Sbjct: 171 TLHFAYTTPKKTR 175

BLAST of PI0026312 vs. TAIR 10
Match: AT4G05010.1 (F-box family protein )

HSP 1 Score: 58.9 bits (141), Expect = 7.0e-09
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0

Query: 95  KTPRVEDCES-ESRLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYT 154
           K P  E  ES  S LE+L  D+L+++LCH+ H+ L  +  VS+ IRKAV+ A++ HF+Y+
Sbjct: 50  KRPSHETTESCRSLLETLHQDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKKSHFDYS 109

Query: 155 TPDR 158
           TP +
Sbjct: 110 TPKK 113

BLAST of PI0026312 vs. TAIR 10
Match: AT1G61340.2 (F-box family protein )

HSP 1 Score: 50.1 bits (118), Expect = 3.3e-06
Identity = 19/44 (43.18%), Postives = 35/44 (79.55%), Query Frame = 0

Query: 115 LLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRS 159
           ++V+I+C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+TP ++
Sbjct: 134 VIVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRKT 177

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q5XF111.0e-7652.34F-box protein At4g35930 OS=Arabidopsis thaliana OX=3702 GN=At4g35930 PE=2 SV=1[more]
Q8GX773.1e-0945.31F-box protein At1g61340 OS=Arabidopsis thaliana OX=3702 GN=At1g61340 PE=2 SV=1[more]
O654164.0e-0932.33F-box protein SKIP27 OS=Arabidopsis thaliana OX=3702 GN=SKIP27 PE=1 SV=2[more]
Q9S9T69.9e-0845.31F-box protein At4g05010 OS=Arabidopsis thaliana OX=3702 GN=At4g05010 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A5A7UEK61.2e-14498.50F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00560 ... [more]
A0A1S3BKS01.2e-14498.50F-box protein At4g35930 OS=Cucumis melo OX=3656 GN=LOC103490677 PE=4 SV=1[more]
A0A0A0L1119.8e-14498.12F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002650 PE=4 ... [more]
A0A6J1CW371.5e-13693.21F-box protein At4g35930 OS=Momordica charantia OX=3673 GN=LOC111014758 PE=4 SV=1[more]
A0A6J1FVG97.3e-13189.51F-box protein At4g35930 OS=Cucurbita moschata OX=3662 GN=LOC111448461 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_008448525.12.4e-14498.50PREDICTED: F-box protein At4g35930 [Cucumis melo] >KAA0052947.1 F-box protein [C... [more]
XP_004146154.12.0e-14398.12F-box protein At4g35930 [Cucumis sativus] >XP_031738005.1 F-box protein At4g3593... [more]
XP_038903596.13.6e-14095.86F-box protein At4g35930 [Benincasa hispida][more]
XP_022145262.13.1e-13693.21F-box protein At4g35930 [Momordica charantia] >XP_022145263.1 F-box protein At4g... [more]
XP_023538881.15.2e-13190.26F-box protein At4g35930 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT4G35930.17.1e-7852.34F-box family protein [more]
AT1G61340.12.2e-1045.31F-box family protein [more]
AT4G21510.12.8e-1032.33F-box family protein [more]
AT4G05010.17.0e-0945.31F-box family protein [more]
AT1G61340.23.3e-0643.18F-box family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..205
NoneNo IPR availablePANTHERPTHR34049:SF2F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSEDcoord: 1..264
NoneNo IPR availablePANTHERPTHR34049F-BOX PROTEIN SKIP27coord: 1..264
IPR001810F-box domainPROSITEPS50181FBOXcoord: 105..153
score: 9.02057
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 97..174

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0026312.1PI0026312.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding