PI0026240 (gene) Melon (PI 482460) v1

Overview


Name	PI0026240
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Serine/threonine-protein phosphatase 7 long form-like protein
Location	chr03: 11945355 .. 11946146 (-)
RNA-Seq Expression	PI0026240
Synteny	PI0026240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTAAATCTAGGACCGATTGATCCTAATGTTTTGTATGATCAATCTTTTCATCGATCTACGATTGTATTGGACGATAGAACGGTAGGTGAGCTAGGTTGTATACGTAGAGAGGTGGTAGTCTAACGCAATATCCCTCTTCACCGTAACATATTGCCTCTACTTCAAGCTTCAGGATTTTATGGGGTGGCTAGATTGGGTTTCATCCAATTAGATTGGCACCTTATTACTGCACTTGTTGAGAGGTGGAGACCGAAAACACATACGTTACATGAGGCGGGTCGATACTTATGGGGTGGAGCATGTTTGGCATGGTTGTACAGACAACTATGCAAAGCAGCAAAACGAGATGTTCGTGAAATTGTTGGTCCGTTGATACTGCTTCAAATATGGGCTTGGGAACGATTTCCCACAATGACTCCACAACTAAGACATGCAAACGATCATCTATTACCTGGACGAGCACACGGTTCACGGTATGCTATTTTATTTTAATTTAGATCAAACAGTAGTTATTATGACTTAGGGGTCGGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGCATAGACATGGACGCGGCCACGGAGAACATAACGAATATCTGTACTCTAAAGCACCTACAGACGTCCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAAGAGTTAGGCAACCAAGAGTTCAGAGTCGACGACGACAACCAACCCAAAATTGACGACGTTCGGGTTGTGAAACACATTGATTTTCTTTTATATTTTAAATGA

mRNA sequence

ATGGCTTTAAATCTAGGACCGATTGATCCTAATGTTTTGTATGATCAATCTTTTCATCGATCTACGATTGTATTGGACGATAGAACGGTAGCAAAACGAGATGTTCGTGAAATTGTTGGTCCGTTGATACTGCTTCAAATATGGGCTTGGGAACGATTTCCCACAATGACTCCACAACTAAGACATGCAAACGATCATCTATTACCTGGACGAGCACACGGTTCACGACATGGACGCGGCCACGGAGAACATAACGAATATCTGTACTCTAAAGCACCTACAGACGTCCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAAGAGTTAGGCAACCAAGAGTTCAGAGTCGACGACGACAACCAACCCAAAATTGACGACGTTCGGGTTGTGAAACACATTGATTTTCTTTTATATTTTAAATGA

Coding sequence (CDS)

ATGGCTTTAAATCTAGGACCGATTGATCCTAATGTTTTGTATGATCAATCTTTTCATCGATCTACGATTGTATTGGACGATAGAACGGTAGCAAAACGAGATGTTCGTGAAATTGTTGGTCCGTTGATACTGCTTCAAATATGGGCTTGGGAACGATTTCCCACAATGACTCCACAACTAAGACATGCAAACGATCATCTATTACCTGGACGAGCACACGGTTCACGACATGGACGCGGCCACGGAGAACATAACGAATATCTGTACTCTAAAGCACCTACAGACGTCCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAAGAGTTAGGCAACCAAGAGTTCAGAGTCGACGACGACAACCAACCCAAAATTGACGACGTTCGGGTTGTGAAACACATTGATTTTCTTTTATATTTTAAATGA

Protein sequence

MALNLGPIDPNVLYDQSFHRSTIVLDDRTVAKRDVREIVGPLILLQIWAWERFPTMTPQLRHANDHLLPGRAHGSRHGRGHGEHNEYLYSKAPTDVPDPQEYQQEPENQEELGNQEFRVDDDNQPKIDDVRVVKHIDFLLYFK

Homology

[Close]

BLAST of PI0026240 vs. ExPASy TrEMBL
Match: A0A5A7SN49 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00110 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.6e-15
Identity = 63/177 (35.59%), Postives = 70/177 (39.55%), Query Frame = 0


Query: 31  AKRDVREIVGPLILLQIWAWERFPTMTPQLRHANDHLLPGRAHGSR-------------- 90
           +KRDVR+I GPLILLQIWAW+RFPT+ PQL HANDHLL GRA GSR              
Sbjct: 176 SKRDVRDIAGPLILLQIWAWKRFPTIAPQLTHANDHLLSGRALGSRWRDQFCVTRSATHV 235

Query: 91  ------------------------------------------------------------ 112
                                                                       
Sbjct: 236 VSQYSYIFDLLQCDQRSNNARLRDVADDPQGRVRVEEVELDEVYHKVKEVPPMTQTQSQT 295

[Close]

BLAST of PI0026240 vs. ExPASy TrEMBL
Match: A0A5D3BTN9 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00320 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 6.8e-14
Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 31  AKRDVREIVGPLILLQIWAWERFPTMTPQLRHANDHLLPGRAHGSR 77
           +KRDV +IVGPLILLQIWAWERFPT+ PQL HANDHLLPGRA GSR
Sbjct: 301 SKRDVHDIVGPLILLQIWAWERFPTIAPQLTHANDHLLPGRALGSR 346

[Close]

BLAST of PI0026240 vs. ExPASy TrEMBL
Match: A0A5A7V745 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G001310 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 6.8e-14
Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 31  AKRDVREIVGPLILLQIWAWERFPTMTPQLRHANDHLLPGRAHGSR 77
           +KRDV +IVGPLILLQIWAWERFPT+ PQL HANDHLLPGRA GSR
Sbjct: 301 SKRDVHDIVGPLILLQIWAWERFPTIAPQLTHANDHLLPGRALGSR 346

[Close]

BLAST of PI0026240 vs. ExPASy TrEMBL
Match: A0A5A7TDY5 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00990 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 8.3e-12
Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 31  AKRDVREIVGPLILLQIWAWERFPTMTPQLRHANDHLLPGRAHGSRHGRGHGEHNEYLYS 90
           +KRDVR+I GPLILLQIWAWERFPT+ PQL HAN+HLLPGRA GSR        +++  +
Sbjct: 142 SKRDVRDIDGPLILLQIWAWERFPTIAPQLTHANNHLLPGRALGSR--------DQFCVT 201

Query: 91  KAPTDVPDPQEYQQEPENQEELGNQEFRVDDDNQP 126
           +  T V     Y  +   ++++  + ++   DN P
Sbjct: 202 RLATHVVSQYRYMFDLLQRDQIIWEPYKDVIDNLP 228

[Close]

BLAST of PI0026240 vs. ExPASy TrEMBL
Match: A0A1S4E663 (serine/threonine-protein phosphatase 7 long form homolog OS=Cucumis melo OX=3656 GN=LOC107992376 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.1e-11
Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = 0


Query: 31  AKRDVREIVGPLILLQIWAWERFPTMTPQLRHANDHLLPGRAHGSRH 78
           +KRDV +IVG LILLQIWAWERFPT+ PQL HANDHLLP +A GSR+
Sbjct: 322 SKRDVHDIVGSLILLQIWAWERFPTIAPQLTHANDHLLPEQALGSRY 368

[Close]

BLAST of PI0026240 vs. NCBI nr
Match: KAA0032200.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 91.3 bits (225), Expect = 7.4e-15
Identity = 63/177 (35.59%), Postives = 70/177 (39.55%), Query Frame = 0


Query: 31  AKRDVREIVGPLILLQIWAWERFPTMTPQLRHANDHLLPGRAHGSR-------------- 90
           +KRDVR+I GPLILLQIWAW+RFPT+ PQL HANDHLL GRA GSR              
Sbjct: 176 SKRDVRDIAGPLILLQIWAWKRFPTIAPQLTHANDHLLSGRALGSRWRDQFCVTRSATHV 235

Query: 91  ------------------------------------------------------------ 112
                                                                       
Sbjct: 236 VSQYSYIFDLLQCDQRSNNARLRDVADDPQGRVRVEEVELDEVYHKVKEVPPMTQTQSQT 295

[Close]

BLAST of PI0026240 vs. NCBI nr
Match: TYK02837.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 87.0 bits (214), Expect = 1.4e-13
Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 31  AKRDVREIVGPLILLQIWAWERFPTMTPQLRHANDHLLPGRAHGSR 77
           +KRDV +IVGPLILLQIWAWERFPT+ PQL HANDHLLPGRA GSR
Sbjct: 301 SKRDVHDIVGPLILLQIWAWERFPTIAPQLTHANDHLLPGRALGSR 346

[Close]

BLAST of PI0026240 vs. NCBI nr
Match: KAA0064192.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 87.0 bits (214), Expect = 1.4e-13
Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 31  AKRDVREIVGPLILLQIWAWERFPTMTPQLRHANDHLLPGRAHGSR 77
           +KRDV +IVGPLILLQIWAWERFPT+ PQL HANDHLLPGRA GSR
Sbjct: 301 SKRDVHDIVGPLILLQIWAWERFPTIAPQLTHANDHLLPGRALGSR 346

[Close]

BLAST of PI0026240 vs. NCBI nr
Match: KAA0041168.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 1.7e-11
Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 31  AKRDVREIVGPLILLQIWAWERFPTMTPQLRHANDHLLPGRAHGSRHGRGHGEHNEYLYS 90
           +KRDVR+I GPLILLQIWAWERFPT+ PQL HAN+HLLPGRA GSR        +++  +
Sbjct: 142 SKRDVRDIDGPLILLQIWAWERFPTIAPQLTHANNHLLPGRALGSR--------DQFCVT 201

Query: 91  KAPTDVPDPQEYQQEPENQEELGNQEFRVDDDNQP 126
           +  T V     Y  +   ++++  + ++   DN P
Sbjct: 202 RLATHVVSQYRYMFDLLQRDQIIWEPYKDVIDNLP 228

[Close]

BLAST of PI0026240 vs. NCBI nr
Match: XP_016903709.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo])

HSP 1 Score: 79.7 bits (195), Expect = 2.2e-11
Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = 0


Query: 31  AKRDVREIVGPLILLQIWAWERFPTMTPQLRHANDHLLPGRAHGSRH 78
           +KRDV +IVG LILLQIWAWERFPT+ PQL HANDHLLP +A GSR+
Sbjct: 322 SKRDVHDIVGSLILLQIWAWERFPTIAPQLTHANDHLLPEQALGSRY 368

The following BLAST results are available for this feature:

BLAST of PI0026240 vs.


Match Name	E-value	Identity	Description

BLAST of PI0026240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SN49	3.6e-15	35.59	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5D3BTN9	6.8e-14	84.78	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7V745	6.8e-14	84.78	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7TDY5	8.3e-12	46.32	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A1S4E663	1.1e-11	76.60	serine/threonine-protein phosphatase 7 long form homolog OS=Cucumis melo OX=3656...	[more]

BLAST of PI0026240 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032200.1	7.4e-15	35.59	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
TYK02837.1	1.4e-13	84.78	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0064192.1	1.4e-13	84.78	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0041168.1	1.7e-11	46.32	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
XP_016903709.1	2.2e-11	76.60	PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis mel...	[more]

BLAST of PI0026240 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0026240.1	PI0026240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance
molecular_function	GO:0008270	zinc ion binding