PI0026178 (gene) Melon (PI 482460) v1

Overview


Name	PI0026178
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	auxin-responsive protein SAUR21-like
Location	chr11: 28151861 .. 28152154 (+)
RNA-Seq Expression	PI0026178
Synteny	PI0026178

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATTCGATTGCTATCTTTGGTTCCTCATGCTAAGCAAATCCTGAAGATGCAGTCAGGTTTTACAAAAAATCAGTTAGATGTTCCAAAAGGGCATGTGGCGGTTTACGTGGGAGAGATTCAAAGCAAGCGGTTTGTGGTTCCAATATCTTACTTGAATCATCCATCATTCCAGCAACTGCTCAGCTATGCAGAGGAAGAATTTGGATTCCATCATCCACAGGGGGGCATAACAATTCCTTGTAAAGAAGATACCTTTCTTGATCTTACTTCTAGATTGCAAGTATCTTGA

mRNA sequence

ATGGGAATTCGATTGCTATCTTTGGTTCCTCATGCTAAGCAAATCCTGAAGATGCAGTCAGGTTTTACAAAAAATCAGTTAGATGTTCCAAAAGGGCATGTGGCGGTTTACGTGGGAGAGATTCAAAGCAAGCGGTTTGTGGTTCCAATATCTTACTTGAATCATCCATCATTCCAGCAACTGCTCAGCTATGCAGAGGAAGAATTTGGATTCCATCATCCACAGGGGGGCATAACAATTCCTTGTAAAGAAGATACCTTTCTTGATCTTACTTCTAGATTGCAAGTATCTTGA

Coding sequence (CDS)

ATGGGAATTCGATTGCTATCTTTGGTTCCTCATGCTAAGCAAATCCTGAAGATGCAGTCAGGTTTTACAAAAAATCAGTTAGATGTTCCAAAAGGGCATGTGGCGGTTTACGTGGGAGAGATTCAAAGCAAGCGGTTTGTGGTTCCAATATCTTACTTGAATCATCCATCATTCCAGCAACTGCTCAGCTATGCAGAGGAAGAATTTGGATTCCATCATCCACAGGGGGGCATAACAATTCCTTGTAAAGAAGATACCTTTCTTGATCTTACTTCTAGATTGCAAGTATCTTGA

Protein sequence

MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGGITIPCKEDTFLDLTSRLQVS

Homology

[Close]

BLAST of PI0026178 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 8.0e-24
Identity = 53/84 (63.10%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 12 AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGF 71
          AK+IL   +G        PKG +AVYVGE Q KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGITIPCKEDTFLDLTSRLQ 96
           HP GG+TIPC EDTF+++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of PI0026178 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.0e-23
Identity = 51/79 (64.56%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 17 KMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q KR++VPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GITIPCKEDTFLDLTSRLQ 96
          G+TIPC EDTF+++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of PI0026178 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.9e-23
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGGITIPCKEDTFLD 89
          PKG +AVYVGE Q KR++VP+SYLN PSFQ LLS +E+EFGF HP GG+TIPC EDTF++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of PI0026178 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-22
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGGITIPCKEDTFLD 89
          PKG +AVYVGE Q KR++VP+SYL+ PSFQ LLS +EEEFGF HP GG+TIPC EDTF++
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 83 VTSRLQ 88

[Close]

BLAST of PI0026178 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-22
Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGGITIPCKEDTFLD 89
          PKG +AVYVGE Q KR++VP+SYLN PSFQ LLS +EEEFGF HP GG+TIPC EDTF++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 90 LTSRL 95
          +TSRL
Sbjct: 85 VTSRL 89

[Close]

BLAST of PI0026178 vs. ExPASy TrEMBL
Match: A0A5D3BKE3 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001800 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 8.3e-48
Identity = 95/97 (97.94%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQ+LKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGITIPCKEDTFLDLTSRLQVS 98
          LLSYAEEEFGFHHPQGG+TIPCKEDTFLDLTSRLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of PI0026178 vs. ExPASy TrEMBL
Match: A0A1S3C5X3 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497283 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 8.3e-48
Identity = 95/97 (97.94%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQ+LKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGITIPCKEDTFLDLTSRLQVS 98
          LLSYAEEEFGFHHPQGG+TIPCKEDTFLDLTSRLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of PI0026178 vs. ExPASy TrEMBL
Match: A0A6J1JHE3 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.8e-45
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGITIPCKEDTFLDLTSRLQVS 98
          LLS+AEE+FGFHHPQGG+TIPCKED F+DLTSRLQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of PI0026178 vs. ExPASy TrEMBL
Match: A0A6J1FVI4 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448832 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.8e-45
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGITIPCKEDTFLDLTSRLQVS 98
          LLS+AEE+FGFHHPQGG+TIPCKED F+DLTSRLQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of PI0026178 vs. ExPASy TrEMBL
Match: A0A6J1FU83 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448831 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 8.6e-45
Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRF+VPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFMVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGITIPCKEDTFLDLTSRLQVS 98
          LLS+AEE+FGFHHPQGG+TIPCKED F+DLTSRLQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of PI0026178 vs. NCBI nr
Match: XP_008457635.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045678.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYJ99606.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa])

HSP 1 Score: 199.1 bits (505), Expect = 1.7e-47
Identity = 95/97 (97.94%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQ+LKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGITIPCKEDTFLDLTSRLQVS 98
          LLSYAEEEFGFHHPQGG+TIPCKEDTFLDLTSRLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of PI0026178 vs. NCBI nr
Match: XP_022944365.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022986731.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986733.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986734.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986735.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >KAG6571048.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 190.3 bits (482), Expect = 7.9e-45
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGITIPCKEDTFLDLTSRLQVS 98
          LLS+AEE+FGFHHPQGG+TIPCKED F+DLTSRLQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of PI0026178 vs. NCBI nr
Match: XP_022944366.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6571052.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189.1 bits (479), Expect = 1.8e-44
Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRF+VPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFMVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGITIPCKEDTFLDLTSRLQVS 98
          LLS+AEE+FGFHHPQGG+TIPCKED F+DLTSRLQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of PI0026178 vs. NCBI nr
Match: XP_023512611.1 (auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.1 bits (479), Expect = 1.8e-44
Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGITIPCKEDTFLDLTSRLQVS 98
          LL++AEE+FGFHHPQGG+TIPCKED F+DLTSRLQVS
Sbjct: 61 LLNHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of PI0026178 vs. NCBI nr
Match: XP_022947571.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022947572.1 auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6605023.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188.7 bits (478), Expect = 2.3e-44
Identity = 89/97 (91.75%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQSGFTK+QLDVPKGHVAVYVGEIQ KRF+VPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 61 LLSYAEEEFGFHHPQGGITIPCKEDTFLDLTSRLQVS 98
          LLS+AEEEFGFHHPQGG+TIPCKED F+DLTSRLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of PI0026178 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.1 bits (292), Expect = 8.0e-27
Identity = 61/105 (58.10%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 1   MGIRLLSLVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVG---EIQSKRFVVPIS 60
           MG+   ++    KQILK+ S   +N+        VPKGHVAVYVG   E++ KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQQLLSYAEEEFGFHHPQGGITIPCKEDTFLDL-TSRLQ 96
           +LNHPSF++ LS AEEEFGF+HP GG+TIPC+E+ FLDL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of PI0026178 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 116.7 bits (291), Expect = 1.0e-26
Identity = 56/98 (57.14%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE-IQSKRFVVPISYLNHPSFQ 60
          M IR+  ++  +KQ+LK  S  + N + +PKGH+AVYVGE +Q +RFVVP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLS-HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSYAEEEFGFHHPQGGITIPCKEDTFLDLTSRLQVS 98
          +LL  AEEEFGF HP GG+TIPC E  F+DL SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of PI0026178 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 116.3 bits (290), Expect = 1.4e-26
Identity = 56/97 (57.73%), Postives = 71/97 (73.20%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHP 60
          M IR+  ++  +KQIL+    + S  + + LDVPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSYAEEEFGFHHPQGGITIPCKEDTFLDLTSR 94
          SFQ LL  AEEEFGF HP GG+TIPC E+ F+DL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of PI0026178 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 5.7e-25
Identity = 53/84 (63.10%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 12 AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGF 71
          AK+IL   +G        PKG +AVYVGE Q KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGITIPCKEDTFLDLTSRLQ 96
           HP GG+TIPC EDTF+++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of PI0026178 vs. TAIR 10
Match: AT4G34790.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-24
Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 1   MGIRLLSLVPHAKQILKMQSGFTKNQLD-----------VPKGHVAVYVGE-IQSKRFVV 60
           MG+ + S++P+AKQI K QS   KN              VPKGHVAVYVGE ++ KRFVV
Sbjct: 1   MGL-MRSMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVV 60

Query: 61  PISYLNHPSFQQLLSYAEEEFGFHHPQGGITIPCKEDTFLDLTSRLQV 97
           PISYLNHP F++ L+ AEEE GFHH  GG+TIPC+E++FL L +  Q+
Sbjct: 61  PISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQL 107

The following BLAST results are available for this feature:

BLAST of PI0026178 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK62	8.0e-24	63.10	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	4.0e-23	64.56	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	8.9e-23	71.21	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJF9	1.5e-22	71.21	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
Q9FJF6	1.5e-22	72.31	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]

BLAST of PI0026178 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BKE3	8.3e-48	97.94	Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C5X3	8.3e-48	97.94	auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497283 PE=...	[more]
A0A6J1JHE3	3.8e-45	92.78	auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398...	[more]
A0A6J1FVI4	3.8e-45	92.78	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A6J1FU83	8.6e-45	91.75	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]

BLAST of PI0026178 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457635.1	1.7e-47	97.94	PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045678.1 aux...	[more]
XP_022944365.1	7.9e-45	92.78	auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-...	[more]
XP_022944366.1	1.8e-44	91.75	auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6571052.1 Auxin-re...	[more]
XP_023512611.1	1.8e-44	91.75	auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]	[more]
XP_022947571.1	2.3e-44	91.75	auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022947572.1 auxin-...	[more]

BLAST of PI0026178 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34810.1	8.0e-27	58.10	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	1.0e-26	57.14	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	1.4e-26	57.73	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	5.7e-25	63.10	SAUR-like auxin-responsive protein family	[more]
AT4G34790.1	1.3e-24	54.63	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 e-value: 3.2E-26 score: 91.3
None	No IPR available	PANTHER	PTHR31929:SF121	AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE	coord: 1..95
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0026178.1	PI0026178.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin