PI0026166 (gene) Melon (PI 482460) v1

Overview


Name	PI0026166
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Transmembrane protein
Location	chr11: 28231628 .. 28232758 (-)
RNA-Seq Expression	PI0026166
Synteny	PI0026166

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGCATCAAGAACTTGAGTGTCCAATAGGCATCAGTCCACACAGCCTAATGACCTTAGGCTGAGGCAACACTCAAAGAATATATCCCAAAACCAACACAACCAAATATTATAGTCTCCCTCTCTATCTCTATTTCATGACGCTATAGAATTTTCAAGTGAGATATGGATTGGTTTTATCCAAAAAGAAGAGGTCCAGAGTGGAAACGAGGATTGACAGGCACAGGCCAAACCCTAGGCTCTGTTTCTTCTCCACCAATTCAATTGCTCATCATTTTTGGCATTGTCATTGTCTTGCTATGGTTTTCTCAGTTCAATGCTGGCTATGAAGCTCAATTGAATAGAAATTTCCAGCTGGTTCTTTTCTTGTTGCCCATCTTCGTTGTTTTCTTCATGTATTCATATTCCTCCGGTCAACTTATCAACTTCGGATTTCGCGGATCGCCAATCGGGTTGGCTCAACGAGGTGCCTCGCCTAGGACTATTGCCATTTTGGTCTTTCTCATTCTGGTTTTGCTTTATTATCAATCCTCATTCCATTGAAAGCAGGCTAATCTTACAAAGCTTGTGATTTTTATGGTATGAGTATGTAATCTTCAACCTTATGGTGGGGTTTATTAACGTATGAATAATGTCGTAAAAATTTTAAATTGCCAAAATTTCCTCTAGATCCGGTTGTTATACATTTAAACTTTTAATTATAAAAATTGAGTGATTAAAGTTGGATCCTCAAACTTATATACTATAGAATTTATAACCATTTGTACGAGTTTAACGGTTTAATTTTTATCATATGAAAGTTTAATTTCTAAAACTATTGTAATTTTTTTAAAAATTTCTTAACAAAATCAAGGAAAAATTATCTGACGTATATGATAGTTCTAAAAATCTTAAATTGCAAACAATTATTATAAAAAGAAATATTGCACAAAATGTAAAAGAAATAAATTTATATACTCATCTCAATCAAAGGTGTGGAGGACTAAATCCCTTTTAACTATGTTCAGATAGATTAATGCAATAAGTCATTTGTTAGATATTTGTTAACATTGCCCCACTTTTGTTTCTTTACCTAACTCAATATGATTGTAGGGGTTTTATAAATTCATATGGAATGTGTTTCGGAGAAAAAT

mRNA sequence

TGGCATCAAGAACTTGAGTGTCCAATAGGCATCAGTCCACACAGCCTAATGACCTTAGGCTGAGGCAACACTCAAAGAATATATCCCAAAACCAACACAACCAAATATTATAGTCTCCCTCTCTATCTCTATTTCATGACGCTATAGAATTTTCAAGTGAGATATGGATTGGTTTTATCCAAAAAGAAGAGGTCCAGAGTGGAAACGAGGATTGACAGGCACAGGCCAAACCCTAGGCTCTGTTTCTTCTCCACCAATTCAATTGCTCATCATTTTTGGCATTGTCATTGTCTTGCTATGGTTTTCTCAGTTCAATGCTGGCTATGAAGCTCAATTGAATAGAAATTTCCAGCTGGTTCTTTTCTTGTTGCCCATCTTCGTTGTTTTCTTCATGTATTCATATTCCTCCGGTCAACTTATCAACTTCGGATTTCGCGGATCGCCAATCGGGTTGGCTCAACGAGGTGCCTCGCCTAGGACTATTGCCATTTTGGTCTTTCTCATTCTGGTTTTGCTTTATTATCAATCCTCATTCCATTGAAAGCAGGCTAATCTTACAAAGCTTGTGATTTTTATGGTATGAGTATGTAATCTTCAACCTTATGGTGGGGTTTATTAACGTATGAATAATGTCGTAAAAATTTTAAATTGCCAAAATTTCCTCTAGATCCGGTTGTTATACATTTAAACTTTTAATTATAAAAATTGAGTGATTAAAGTTGGATCCTCAAACTTATATACTATAGAATTTATAACCATTTGTACGAGTTTAACGGTTTAATTTTTATCATATGAAAGTTTAATTTCTAAAACTATTGTAATTTTTTTAAAAATTTCTTAACAAAATCAAGGAAAAATTATCTGACGTATATGATAGTTCTAAAAATCTTAAATTGCAAACAATTATTATAAAAAGAAATATTGCACAAAATGTAAAAGAAATAAATTTATATACTCATCTCAATCAAAGGTGTGGAGGACTAAATCCCTTTTAACTATGTTCAGATAGATTAATGCAATAAGTCATTTGTTAGATATTTGTTAACATTGCCCCACTTTTGTTTCTTTACCTAACTCAATATGATTGTAGGGGTTTTATAAATTCATATGGAATGTGTTTCGGAGAAAAAT

Coding sequence (CDS)

ATGGATTGGTTTTATCCAAAAAGAAGAGGTCCAGAGTGGAAACGAGGATTGACAGGCACAGGCCAAACCCTAGGCTCTGTTTCTTCTCCACCAATTCAATTGCTCATCATTTTTGGCATTGTCATTGTCTTGCTATGGTTTTCTCAGTTCAATGCTGGCTATGAAGCTCAATTGAATAGAAATTTCCAGCTGGTTCTTTTCTTGTTGCCCATCTTCGTTGTTTTCTTCATGTATTCATATTCCTCCGGTCAACTTATCAACTTCGGATTTCGCGGATCGCCAATCGGGTTGGCTCAACGAGGTGCCTCGCCTAGGACTATTGCCATTTTGGTCTTTCTCATTCTGGTTTTGCTTTATTATCAATCCTCATTCCATTGA

Protein sequence

MDWFYPKRRGPEWKRGLTGTGQTLGSVSSPPIQLLIIFGIVIVLLWFSQFNAGYEAQLNRNFQLVLFLLPIFVVFFMYSYSSGQLINFGFRGSPIGLAQRGASPRTIAILVFLILVLLYYQSSFH

Homology

[Close]

BLAST of PI0026166 vs. ExPASy TrEMBL
Match: A0A0A0LLH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263890 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54
Identity = 112/125 (89.60%), Postives = 116/125 (92.80%), Query Frame = 0


Query: 1   MDWFYPKRRGPEWKRGLTGTGQTLGSVSSPPIQLLIIFGIVIVLLWFSQFNAGYEAQLNR 60
           MD FYPKRRGPEWKRGLTGTGQTL SVS PPIQLLIIFGIVIVLLWFSQFNAG+EAQLNR
Sbjct: 1   MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNR 60

Query: 61  NFQLVLFLLPIFVVFFMYSYSSGQLINFGFRGSPIGLAQRGASPRTIAILVFLILVLLYY 120
           +FQL LFLLPIFV+FFMYSYSS +LINFGFR SP GLAQRGASP TIAILV LILVLLYY
Sbjct: 61  SFQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTGLAQRGASPWTIAILVLLILVLLYY 120

Query: 121 QSSFH 126
           QSSFH
Sbjct: 121 QSSFH 125

[Close]

BLAST of PI0026166 vs. ExPASy TrEMBL
Match: B9H148 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G167800 PE=4 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 3.6e-27
Identity = 74/130 (56.92%), Postives = 89/130 (68.46%), Query Frame = 0


Query: 1   MDWFYPKRRGPEWKRGLTGTGQTLGSVSSPPIQLLIIFGIVIVLLWFSQFNAGYEAQLNR 60
           M+WFYPKRRGPEWK+G   TGQT+ S+S+PP  LL IFGIVI LLW S +  GYEAQL  
Sbjct: 1   MEWFYPKRRGPEWKQG--WTGQTVASMSTPPFPLLAIFGIVISLLWLSHY-TGYEAQLRH 60

Query: 61  ---NFQLVLFLLPIFVVFFMYSYSSGQLINFGFRGSPIGLAQRGAS--PRTIAILVFLIL 120
              N Q+ LFLLPI ++ FM SYS+  L+ +  R SP   A R  S  P  IA+ V L+L
Sbjct: 61  SAINLQIFLFLLPILLILFMASYSTNWLLYYRLRDSPPDSAPRSTSSFPWGIAVFVVLLL 120

Query: 121 VLLYYQSSFH 126
           +LL YQSSFH
Sbjct: 121 MLLSYQSSFH 127

[Close]

BLAST of PI0026166 vs. ExPASy TrEMBL
Match: A0A2P5ED06 (Transmembrane protein OS=Trema orientale OX=63057 GN=TorRG33x02_208280 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 6.1e-27
Identity = 74/132 (56.06%), Postives = 93/132 (70.45%), Query Frame = 0


Query: 1   MDWFYPKRRGPEWKRGLTGTGQTLGSVSSPPIQLLIIFGIVIVLLWFSQFNAGYEAQLNR 60
           M+WFYPKRRGP+WK+G   T QT+ S+S+P   LL IF IV+VLLW SQ+  GY+AQL +
Sbjct: 1   MEWFYPKRRGPQWKQG--WTSQTVASISAPSFHLLAIFSIVMVLLWLSQY-TGYKAQLQQ 60

Query: 61  ---NFQLVLFLLPIFVVFFMYSYSSGQLINFGFR----GSPIGLAQRGASPRTIAILVFL 120
              NFQL +FLLP+ ++ FM SYSS  L NF FR     +P+ LA  G+SP  +A  V L
Sbjct: 61  TAVNFQLFMFLLPVLLIVFMASYSSSGLFNFRFRRPRPDTPMQLA--GSSPWGVAFFVAL 120

Query: 121 ILVLLYYQSSFH 126
           +LVLL YQSSFH
Sbjct: 121 LLVLLSYQSSFH 127

[Close]

BLAST of PI0026166 vs. ExPASy TrEMBL
Match: A0A7N2N0B8 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 6.1e-27
Identity = 75/127 (59.06%), Postives = 87/127 (68.50%), Query Frame = 0


Query: 1   MDWFYPKRRGPEWKRGLTGTGQTLGSVSSPPIQLLIIFGIVIVLLWFSQFNAGYEAQLN- 60
           M+WFY +RRGPEWK+G   TGQTLGS+S+PP+ LL IFGIV VLLWFS +  GY+ QL  
Sbjct: 1   MEWFYTRRRGPEWKQG--WTGQTLGSISTPPLHLLTIFGIVFVLLWFSHY-TGYKTQLRT 60

Query: 61  --RNFQLVLFLLPIFVVFFMYSYSSGQLINFGFRGSPIGLAQRGASPRTIAILVFLILVL 120
              NFQL LFLLPI +V  M S SSG   NF     P+  +  G SP  IA LV L+LVL
Sbjct: 61  TAMNFQLFLFLLPILLVLLMASNSSGWRFNF-----PLSRSDHGGSPLGIASLVVLLLVL 119

Query: 121 LYYQSSF 125
           L YQSSF
Sbjct: 121 LSYQSSF 119

[Close]

BLAST of PI0026166 vs. ExPASy TrEMBL
Match: A0A5N6QRB9 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_005182 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.3e-26
Identity = 74/129 (57.36%), Postives = 90/129 (69.77%), Query Frame = 0


Query: 1   MDWFYPKRRGPEWKRGLTGTGQTLGSVSSPPIQLLIIFGIVIVLLWFSQFNAGYEAQLNR 60
           M+WFY KRRGPEWK+G   TGQTLGS+S+PP+ LL IFGIVIVLLW SQ +  Y+AQL  
Sbjct: 1   MEWFYTKRRGPEWKQG--WTGQTLGSISTPPLHLLTIFGIVIVLLWLSQ-STDYKAQLKY 60

Query: 61  ---NFQLVLFLLPIFVVFFMYSYSSGQLINFGFRGSPIGLAQR-GASPRTIAILVFLILV 120
              NFQL +FLLPI ++ FM +YS+G   +     S     QR G  P  +AILV ++LV
Sbjct: 61  TTVNFQLFIFLLPILLILFMAAYSTGGRFHSPLLRSEYESVQRAGGLPWGMAILVVVLLV 120

Query: 121 LLYYQSSFH 126
           LL YQSSFH
Sbjct: 121 LLSYQSSFH 126

[Close]

BLAST of PI0026166 vs. NCBI nr
Match: KGN61894.1 (hypothetical protein Csa_005908 [Cucumis sativus])

HSP 1 Score: 222.2 bits (565), Expect = 2.4e-54
Identity = 112/125 (89.60%), Postives = 116/125 (92.80%), Query Frame = 0


Query: 1   MDWFYPKRRGPEWKRGLTGTGQTLGSVSSPPIQLLIIFGIVIVLLWFSQFNAGYEAQLNR 60
           MD FYPKRRGPEWKRGLTGTGQTL SVS PPIQLLIIFGIVIVLLWFSQFNAG+EAQLNR
Sbjct: 1   MDCFYPKRRGPEWKRGLTGTGQTLSSVSPPPIQLLIIFGIVIVLLWFSQFNAGHEAQLNR 60

Query: 61  NFQLVLFLLPIFVVFFMYSYSSGQLINFGFRGSPIGLAQRGASPRTIAILVFLILVLLYY 120
           +FQL LFLLPIFV+FFMYSYSS +LINFGFR SP GLAQRGASP TIAILV LILVLLYY
Sbjct: 61  SFQLFLFLLPIFVIFFMYSYSSSRLINFGFRRSPTGLAQRGASPWTIAILVLLILVLLYY 120

Query: 121 QSSFH 126
           QSSFH
Sbjct: 121 QSSFH 125

[Close]

BLAST of PI0026166 vs. NCBI nr
Match: KAG7010871.1 (hypothetical protein SDJN02_27669, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 148.7 bits (374), Expect = 3.4e-32
Identity = 85/129 (65.89%), Postives = 95/129 (73.64%), Query Frame = 0


Query: 1   MDWFYPKRRGPEWKRGLTGTGQTL-GSVSSPPIQLLIIFGIVIVLLWFSQFNAGYEAQLN 60
           M+W  PKRRGPEWK+    TGQTL GSVSSPP QLL IFGIVIVLLWFSQ   GY+ Q++
Sbjct: 1   MEWLEPKRRGPEWKQ--EWTGQTLGGSVSSPPPQLLTIFGIVIVLLWFSQSTTGYDTQMH 60

Query: 61  R---NFQLVLFLLPIFVVFFMYSYSSGQLINFGFRGSPIGLAQRGASPRTIAILVFLILV 120
           R   NFQL+LFLLPI V+FFM SYS   LIN     S  G  +RGASP TI ILV LILV
Sbjct: 61  RSASNFQLLLFLLPILVIFFMSSYSMCGLINLRSWRSATGSPRRGASPLTITILVSLILV 120

Query: 121 LLYYQSSFH 126
           LLY++ SFH
Sbjct: 121 LLYFRPSFH 127

[Close]

BLAST of PI0026166 vs. NCBI nr
Match: KAF3434655.1 (hypothetical protein FNV43_RR21740 [Rhamnella rubrinervis])

HSP 1 Score: 138.3 bits (347), Expect = 4.6e-29
Identity = 79/129 (61.24%), Postives = 94/129 (72.87%), Query Frame = 0


Query: 1   MDWFYPKRRGPEWKRGLTGTGQTLGSVSSPPIQLLIIFGIVIVLLWFSQFNAGYEAQLNR 60
           M+WFYPKRRGPEWK+G   TGQTL S+S+PP+ LL IFGIVIVLLWFSQ+  GY+AQL +
Sbjct: 1   MEWFYPKRRGPEWKQG--WTGQTLTSISAPPLHLLTIFGIVIVLLWFSQY-TGYKAQLQQ 60

Query: 61  ---NFQLVLFLLPIFVVFFMYSY-SSGQLINFGFRGSPIGLAQRGASPRTIAILVFLILV 120
              NFQL L +LPI ++FFM  Y SSG   NF  R  P    + G SP  +AIL+ L+LV
Sbjct: 61  TTVNFQLFLMVLPILLIFFMALYSSSGGWFNFQLR-RPEAFHRAGGSPWGVAILLVLLLV 120

Query: 121 LLYYQSSFH 126
           LL YQSSFH
Sbjct: 121 LLSYQSSFH 125

[Close]

BLAST of PI0026166 vs. NCBI nr
Match: PNT41644.1 (hypothetical protein POPTR_004G167800 [Populus trichocarpa])

HSP 1 Score: 131.0 bits (328), Expect = 7.4e-27
Identity = 74/130 (56.92%), Postives = 89/130 (68.46%), Query Frame = 0


Query: 1   MDWFYPKRRGPEWKRGLTGTGQTLGSVSSPPIQLLIIFGIVIVLLWFSQFNAGYEAQLNR 60
           M+WFYPKRRGPEWK+G   TGQT+ S+S+PP  LL IFGIVI LLW S +  GYEAQL  
Sbjct: 1   MEWFYPKRRGPEWKQG--WTGQTVASMSTPPFPLLAIFGIVISLLWLSHY-TGYEAQLRH 60

Query: 61  ---NFQLVLFLLPIFVVFFMYSYSSGQLINFGFRGSPIGLAQRGAS--PRTIAILVFLIL 120
              N Q+ LFLLPI ++ FM SYS+  L+ +  R SP   A R  S  P  IA+ V L+L
Sbjct: 61  SAINLQIFLFLLPILLILFMASYSTNWLLYYRLRDSPPDSAPRSTSSFPWGIAVFVVLLL 120

Query: 121 VLLYYQSSFH 126
           +LL YQSSFH
Sbjct: 121 MLLSYQSSFH 127

[Close]

BLAST of PI0026166 vs. NCBI nr
Match: PON83413.1 (Transmembrane protein [Trema orientale])

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-26
Identity = 74/132 (56.06%), Postives = 93/132 (70.45%), Query Frame = 0


Query: 1   MDWFYPKRRGPEWKRGLTGTGQTLGSVSSPPIQLLIIFGIVIVLLWFSQFNAGYEAQLNR 60
           M+WFYPKRRGP+WK+G   T QT+ S+S+P   LL IF IV+VLLW SQ+  GY+AQL +
Sbjct: 1   MEWFYPKRRGPQWKQG--WTSQTVASISAPSFHLLAIFSIVMVLLWLSQY-TGYKAQLQQ 60

Query: 61  ---NFQLVLFLLPIFVVFFMYSYSSGQLINFGFR----GSPIGLAQRGASPRTIAILVFL 120
              NFQL +FLLP+ ++ FM SYSS  L NF FR     +P+ LA  G+SP  +A  V L
Sbjct: 61  TAVNFQLFMFLLPVLLIVFMASYSSSGLFNFRFRRPRPDTPMQLA--GSSPWGVAFFVAL 120

Query: 121 ILVLLYYQSSFH 126
           +LVLL YQSSFH
Sbjct: 121 LLVLLSYQSSFH 127

[Close]

BLAST of PI0026166 vs. TAIR 10
Match: AT5G42146.1 (unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 7.4e-09
Identity = 43/132 (32.58%), Postives = 68/132 (51.52%), Query Frame = 0


Query: 1   MDWFYPKRRGPEWKRGLTGTGQTLGSVSSPPIQLLIIFGIVIVLLWFSQF-NAGYEAQLN 60
           M WF  +RRG  WKRG     +TL + S+PP+ LL +  I+ +LL+ S +    YE +  
Sbjct: 1   MGWFIKERRGGSWKRG--WLEETLLTSSAPPLTLLALLAIISLLLFLSSYPRYKYEVEKT 60

Query: 61  -RNFQLVLFLLPIFVVFFMYSYSSGQLI----NFGFRGSPI-GLAQRGASPRTIAILVFL 120
             N +L +  LPI  VF + S S    +    ++  R +    L   G  P  + +++ L
Sbjct: 61  AANLKLFMLFLPILFVFVLVSLSFVHRLLFKSSYSVRANQAKSLFGEGNFPWGVLLMLIL 120

Query: 121 ILVLLYYQSSFH 126
           +L+L+  QS FH
Sbjct: 121 LLLLVSKQSYFH 130

The following BLAST results are available for this feature:

BLAST of PI0026166 vs.


Match Name	E-value	Identity	Description

BLAST of PI0026166 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLH8	1.2e-54	89.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263890 PE=4 SV=1	[more]
B9H148	3.6e-27	56.92	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G167800 PE=4 ...	[more]
A0A2P5ED06	6.1e-27	56.06	Transmembrane protein OS=Trema orientale OX=63057 GN=TorRG33x02_208280 PE=4 SV=1	[more]
A0A7N2N0B8	6.1e-27	59.06	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A5N6QRB9	2.3e-26	57.36	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_005182 PE=4 SV=1	[more]

BLAST of PI0026166 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61894.1	2.4e-54	89.60	hypothetical protein Csa_005908 [Cucumis sativus]	[more]
KAG7010871.1	3.4e-32	65.89	hypothetical protein SDJN02_27669, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAF3434655.1	4.6e-29	61.24	hypothetical protein FNV43_RR21740 [Rhamnella rubrinervis]	[more]
PNT41644.1	7.4e-27	56.92	hypothetical protein POPTR_004G167800 [Populus trichocarpa]	[more]
PON83413.1	1.3e-26	56.06	Transmembrane protein [Trema orientale]	[more]

BLAST of PI0026166 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42146.1	7.4e-09	32.58	unknown protein; Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33306:SF21	EXPRESSED PROTEIN	coord: 1..125
None	No IPR available	PANTHER	PTHR33306	EXPRESSED PROTEIN-RELATED-RELATED	coord: 1..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0026166.1	PI0026166.1	mRNA