PI0025977 (gene) Melon (PI 482460) v1

Overview
NamePI0025977
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptionconserved peptide upstream open reading frame 18
Locationchr07: 20601067 .. 20601270 (+)
RNA-Seq ExpressionPI0025977
SyntenyPI0025977
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTGGTTGGGAAAGCTGGGTTTAAACTTGAGTTCCAATTCTAATCACTTCATTACCTGTCTTTTGCTTTTTCTCCTCCATTATTCACCTCAATTGACTCCTTCTTTGTTTAATTTCGACAATAAATCCATTGATCCCTTGTTATTACTGCTTTTGAATCTTGATTCCAATCGTTTTCTTAATAATAAACCGACGACTTAA

mRNA sequence

ATGAACTGGTTGGGAAAGCTGGGTTTAAACTTGAGTTCCAATTCTAATCACTTCATTACCTGTCTTTTGCTTTTTCTCCTCCATTATTCACCTCAATTGACTCCTTCTTTGTTTAATTTCGACAATAAATCCATTGATCCCTTGTTATTACTGCTTTTGAATCTTGATTCCAATCGTTTTCTTAATAATAAACCGACGACTTAA

Coding sequence (CDS)

ATGAACTGGTTGGGAAAGCTGGGTTTAAACTTGAGTTCCAATTCTAATCACTTCATTACCTGTCTTTTGCTTTTTCTCCTCCATTATTCACCTCAATTGACTCCTTCTTTGTTTAATTTCGACAATAAATCCATTGATCCCTTGTTATTACTGCTTTTGAATCTTGATTCCAATCGTTTTCTTAATAATAAACCGACGACTTAA

Protein sequence

MNWLGKLGLNLSSNSNHFITCLLLFLLHYSPQLTPSLFNFDNKSIDPLLLLLLNLDSNRFLNNKPTT
Homology
BLAST of PI0025977 vs. ExPASy TrEMBL
Match: A0A1S3CLZ5 (uncharacterized protein LOC103502484 OS=Cucumis melo OX=3656 GN=LOC103502484 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.0e-26
Identity = 64/67 (95.52%), Postives = 64/67 (95.52%), Query Frame = 0

Query: 1  MNWLGKLGLNLSSNSNHFITCLLLFLLHYSPQLTPSLFNFDNKSIDPLLLLLLNLDSNRF 60
          MN LGKLGLNLSSNSNHFITCLLLFLLHYSPQLTPSLFNFD KSID LLLLLLNLDSNRF
Sbjct: 1  MNCLGKLGLNLSSNSNHFITCLLLFLLHYSPQLTPSLFNFDYKSIDHLLLLLLNLDSNRF 60

Query: 61 LNNKPTT 68
          LNNKPTT
Sbjct: 61 LNNKPTT 67

BLAST of PI0025977 vs. ExPASy TrEMBL
Match: A0A2P2MJZ7 (Uncharacterized protein LOC103965579 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.3e-11
Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0

Query: 1  MNWLGKLGLN-LSSNSNHFITCLLLFLLHYSPQLTPSLFNFDNKSIDPLLLLLLNLDSNR 60
          M+W GK G    SSNSNHF+TCLL+F LH+SPQL PSLF F NKSI+PLL LL+      
Sbjct: 1  MSWFGKPGCYFFSSNSNHFLTCLLIFTLHFSPQLPPSLFKFQNKSIEPLLALLVASSDRN 60

Query: 61 FLNN 64
          F +N
Sbjct: 61 FNSN 64

BLAST of PI0025977 vs. ExPASy TrEMBL
Match: A0A199VDA8 (Putative polyamine oxidase 2 OS=Ananas comosus OX=4615 GN=ACMD2_00651 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.4e-07
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 0

Query: 1  MNWLGKLGLNLSSNSNHFITCLLLFLLHYSPQLTPSLF--------NFDNKSIDPLLLLL 53
          MNW   LGLN  SNSNHFITCLL+F+LHYSPQL PS+         N + KSI P  +++
Sbjct: 1  MNWFVNLGLN--SNSNHFITCLLIFVLHYSPQLPPSILNSRRSYFSNVERKSISPSAIVI 58

BLAST of PI0025977 vs. NCBI nr
Match: XP_008464647.1 (PREDICTED: uncharacterized protein LOC103502484 [Cucumis melo])

HSP 1 Score: 125.6 bits (314), Expect = 1.7e-25
Identity = 64/67 (95.52%), Postives = 64/67 (95.52%), Query Frame = 0

Query: 1  MNWLGKLGLNLSSNSNHFITCLLLFLLHYSPQLTPSLFNFDNKSIDPLLLLLLNLDSNRF 60
          MN LGKLGLNLSSNSNHFITCLLLFLLHYSPQLTPSLFNFD KSID LLLLLLNLDSNRF
Sbjct: 1  MNCLGKLGLNLSSNSNHFITCLLLFLLHYSPQLTPSLFNFDYKSIDHLLLLLLNLDSNRF 60

Query: 61 LNNKPTT 68
          LNNKPTT
Sbjct: 61 LNNKPTT 67

BLAST of PI0025977 vs. NCBI nr
Match: OAY75003.1 (putative polyamine oxidase 2 [Ananas comosus])

HSP 1 Score: 62.4 bits (150), Expect = 1.7e-06
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 0

Query: 1  MNWLGKLGLNLSSNSNHFITCLLLFLLHYSPQLTPSLF--------NFDNKSIDPLLLLL 53
          MNW   LGLN  SNSNHFITCLL+F+LHYSPQL PS+         N + KSI P  +++
Sbjct: 1  MNWFVNLGLN--SNSNHFITCLLIFVLHYSPQLPPSILNSRRSYFSNVERKSISPSAIVI 58

BLAST of PI0025977 vs. TAIR 10
Match: AT3G59052.1 (conserved peptide upstream open reading frame 18 )

HSP 1 Score: 44.3 bits (103), Expect = 4.5e-05
Identity = 28/63 (44.44%), Postives = 37/63 (58.73%), Query Frame = 0

Query: 1  MNWLGKLGLNLSSNSNHFITCLLLFLLHYSPQLTPSLFNFDNKSIDPLLLLLLNLDSNRF 60
          MN+  KLG N S  S    T LL+ +L +SPQL  SLF F+ KS+DPL L   + + N  
Sbjct: 1  MNFFRKLGFNPSIASYFTNTSLLISILSFSPQLPISLFLFEQKSLDPLSLCNSSTNFNNL 60

Query: 61 LNN 64
           +N
Sbjct: 61 ESN 63

BLAST of PI0025977 vs. TAIR 10
Match: AT2G43018.1 (conserved peptide upstream open reading frame 17 )

HSP 1 Score: 42.4 bits (98), Expect = 1.7e-04
Identity = 27/62 (43.55%), Postives = 37/62 (59.68%), Query Frame = 0

Query: 1  MNWLGKLGLNLSSNSNHFITCLLLFLLHYSPQLTPSLFNFDNKSIDPLLLLLLNLDSNRF 60
          MN  G L +  SS S+HF TCLL+F+LH+SPQL  +  N ++           NL+SNR 
Sbjct: 1  MNLFGSL-IFSSSISSHFTTCLLIFILHFSPQLNSNNNNNNSNRNSN------NLESNRL 55

Query: 61 LN 63
          +N
Sbjct: 61 IN 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3CLZ58.0e-2695.52uncharacterized protein LOC103502484 OS=Cucumis melo OX=3656 GN=LOC103502484 PE=... [more]
A0A2P2MJZ74.3e-1160.94Uncharacterized protein LOC103965579 OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
A0A199VDA88.4e-0755.00Putative polyamine oxidase 2 OS=Ananas comosus OX=4615 GN=ACMD2_00651 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_008464647.11.7e-2595.52PREDICTED: uncharacterized protein LOC103502484 [Cucumis melo][more]
OAY75003.11.7e-0655.00putative polyamine oxidase 2 [Ananas comosus][more]
Match NameE-valueIdentityDescription
AT3G59052.14.5e-0544.44conserved peptide upstream open reading frame 18 [more]
AT2G43018.11.7e-0443.55conserved peptide upstream open reading frame 17 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0025977.1PI0025977.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016491 oxidoreductase activity