PI0025887 (gene) Melon (PI 482460) v1

Overview
NamePI0025887
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr08: 22676723 .. 22676992 (-)
RNA-Seq ExpressionPI0025887
SyntenyPI0025887
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAACGAAAGAATGGGGCTTAATTAAGTAACTCTCCACTGTAGGAAGATTGAAGAAGATTGATTCAGTCGGCAGTAAGGCTCAAAGTGAGCGTTTAGATTACGCTCAAATAGACATGTCATTTATATATGGATGCCAAATGAGTGATGCACCAGGAACTTTTACCTACCCTTTAGAAAACTTTGGACCCCATGAAAAAACTTTGAAGAATATGCTTACAACTCCTCTTATTCTTGGTTTGGAATTGAAGGGTTTAAGGAAAGATTAG

mRNA sequence

ATGAAAACGAAAGAATGGGGCTTAATTAATAAGGCTCAAAGTGAGCGTTTAGATTACGCTCAAATAGACATGTCATTTATATATGGATGCCAAATGAGTGATGCACCAGGAACTTTTACCTACCCTTTAGAAAACTTTGGACCCCATGAAAAAACTTTGAAGAATATGCTTACAACTCCTCTTATTCTTGGTTTGGAATTGAAGGGTTTAAGGAAAGATTAG

Coding sequence (CDS)

ATGAAAACGAAAGAATGGGGCTTAATTAATAAGGCTCAAAGTGAGCGTTTAGATTACGCTCAAATAGACATGTCATTTATATATGGATGCCAAATGAGTGATGCACCAGGAACTTTTACCTACCCTTTAGAAAACTTTGGACCCCATGAAAAAACTTTGAAGAATATGCTTACAACTCCTCTTATTCTTGGTTTGGAATTGAAGGGTTTAAGGAAAGATTAG

Protein sequence

MKTKEWGLINKAQSERLDYAQIDMSFIYGCQMSDAPGTFTYPLENFGPHEKTLKNMLTTPLILGLELKGLRKD
Homology
[Close]
BLAST of PI0025887 vs. ExPASy TrEMBL
Match: A0A0A0LDH1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732450 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.5e-29
Identity = 67/89 (75.28%), Postives = 72/89 (80.90%), Query Frame = 0 

Query: 1  MKTKEWGLI----------------NKAQSERLDYAQIDMSFIYGCQMSDAPGTFTYPLE 60
          MKTKEWGLI                +KAQ ERLDYAQIDMSFIYGCQM+DAPGTFTYPLE
Sbjct: 1  MKTKEWGLIKQLSAVGRLKMIDSVGSKAQVERLDYAQIDMSFIYGCQMNDAPGTFTYPLE 60

Query: 61 NFGPHEKTLKNMLTTPLILGLELKGLRKD 74
          NFGPH+KTLKNMLTTPLILGL+LKGLR+D
Sbjct: 61 NFGPHKKTLKNMLTTPLILGLQLKGLRED 89

[Close]
BLAST of PI0025887 vs. NCBI nr
Match: KGN58787.1 (hypothetical protein Csa_002358 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 67/89 (75.28%), Postives = 72/89 (80.90%), Query Frame = 0 

Query: 1  MKTKEWGLI----------------NKAQSERLDYAQIDMSFIYGCQMSDAPGTFTYPLE 60
          MKTKEWGLI                +KAQ ERLDYAQIDMSFIYGCQM+DAPGTFTYPLE
Sbjct: 1  MKTKEWGLIKQLSAVGRLKMIDSVGSKAQVERLDYAQIDMSFIYGCQMNDAPGTFTYPLE 60

Query: 61 NFGPHEKTLKNMLTTPLILGLELKGLRKD 74
          NFGPH+KTLKNMLTTPLILGL+LKGLR+D
Sbjct: 61 NFGPHKKTLKNMLTTPLILGLQLKGLRED 89

The following BLAST results are available for this feature:
BLAST of PI0025887 vs.
Match NameE-valueIdentityDescription
BLAST of PI0025887 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDH16.5e-2975.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732450 PE=4 SV=1[more]
BLAST of PI0025887 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58787.11.3e-2875.28hypothetical protein Csa_002358 [Cucumis sativus][more]
BLAST of PI0025887 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0025887.1PI0025887.1mRNA