PI0025874 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGTCCTTCCCTACGCTTCGTTGGTTGGAAATAATTAAATGCCCTAATCTCATGAGTTTACCAAAATGGATTAACCATCTCATTTCTCTTGAAACGCTGCGTATTATTAGCTGTCCGAAGTTAAAGTCACTACCTGTGGAAATTGGAAAACTCCAATATTTGCAAGAGCTTCAGATAGTGGACTGCCCAGAACTTGAAGAGAGATGCAAGCAGGGAGGAGATGATTGGCATAAAATTTCTTCCATCCCCAACAGTACTCTTCGCCAAATTGCCACTGACAATGACACACCATATCTTTCAGGTCTGCTTCACATATCCCTTTACTATCCTTTGTATTCCTATTTTGTTTAGGATGCATCCCAGATGCACCCGTCTAGGTATTTTCTATCTCTTCATCAAACAAAAATAAAATTAAAAATTATTTTTTTTAAAAAATAAGTTTTGATCTTGTTTTTGTGTGGTGGAGAGATGGAGAGCATGTAAATAGGTGCATCCCGGGATACATCTAAGTATTGCCCTTTTGTTTTGTTTATGTATCTTCAAGTTGTGTATCAATTTCATCATTTTTTTATTAAAAAAAGAAAGGAAAAAACAAAAAAAAAAAATTGGATTCTAAACTTGAATAAGCGTTGTAATTTTCACCCCAATTCAATTTTCCTAAATTTGTTTTGTGAAAATTCTTCATTAACTCATTAATATTAAAATAAGCAACACCTCTTAAAGTTGGTTAAAGATGGCAATATTTATCTAAGCTTAAAGTAAATTTAATGGTACTAAAAAAAAACGTGATTTAATGGAATTGAAATTTTAGAGTTAAAATTAATATATAGCAAGTTTTATGGTCAAATTGATTTTTTAATTCACAAATATATTTCTTTATTGAACTTCAGGTGGTCAAGCTGATTAATCAATTACCAGCTAAGGAAATTAATAACAGAAATTTGTAACTCAACCATGGCAAGTTGGCAAGTGCAAGGAAAAAGGAAGAAAAGAGAAATTCAGACATCTATAGAATGCGATGGGGAGTCAGGGGAGTTGAAAGGAAAGAAAAAACACAGAACATAG ATGCCGTCCTTCCCTACGCTTCGTTGGTTGGAAATAATTAAATGCCCTAATCTCATGAGTTTACCAAAATGGATTAACCATCTCATTTCTCTTGAAACGCTGCGTATTATTAGCTGTCCGAAGTTAAAGTCACTACCTGTGGAAATTGGAAAACTCCAATATTTGCAAGAGCTTCAGATAGTGGACTGCCCAGAACTTGAAGAGAGATGCAAGCAGGGAGGAGATGATTGGCATAAAATTTCTTCCATCCCCAACAGTACTCTTCGCCAAATTGCCACTGACAATGACACACCATATCTTTCAGAATGCGATGGGGAGTCAGGGGAGTTGAAAGGAAAGAAAAAACACAGAACATAG ATGCCGTCCTTCCCTACGCTTCGTTGGTTGGAAATAATTAAATGCCCTAATCTCATGAGTTTACCAAAATGGATTAACCATCTCATTTCTCTTGAAACGCTGCGTATTATTAGCTGTCCGAAGTTAAAGTCACTACCTGTGGAAATTGGAAAACTCCAATATTTGCAAGAGCTTCAGATAGTGGACTGCCCAGAACTTGAAGAGAGATGCAAGCAGGGAGGAGATGATTGGCATAAAATTTCTTCCATCCCCAACAGTACTCTTCGCCAAATTGCCACTGACAATGACACACCATATCTTTCAGAATGCGATGGGGAGTCAGGGGAGTTGAAAGGAAAGAAAAAACACAGAACATAG MPSFPTLRWLEIIKCPNLMSLPKWINHLISLETLRIISCPKLKSLPVEIGKLQYLQELQIVDCPELEERCKQGGDDWHKISSIPNSTLRQIATDNDTPYLSECDGESGELKGKKKHRT Homology
BLAST of PI0025874 vs. ExPASy Swiss-Prot
Match: Q7XA40 (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2) HSP 1 Score: 62.0 bits (149), Expect = 5.2e-09 Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 0
BLAST of PI0025874 vs. ExPASy Swiss-Prot
Match: Q7XBQ9 (Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 8.9e-09 Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 0
BLAST of PI0025874 vs. ExPASy Swiss-Prot
Match: Q9LVT1 (Putative disease resistance protein At5g47280 OS=Arabidopsis thaliana OX=3702 GN=At5g47280 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 8.3e-07 Identity = 28/64 (43.75%), Postives = 38/64 (59.38%), Query Frame = 0
BLAST of PI0025874 vs. ExPASy Swiss-Prot
Match: Q9FW44 (Disease resistance protein ADR1 OS=Arabidopsis thaliana OX=3702 GN=ADR1 PE=2 SV=2) HSP 1 Score: 54.3 bits (129), Expect = 1.1e-06 Identity = 30/85 (35.29%), Postives = 50/85 (58.82%), Query Frame = 0
BLAST of PI0025874 vs. ExPASy Swiss-Prot
Match: Q9SZA7 (Probable disease resistance protein At4g33300 OS=Arabidopsis thaliana OX=3702 GN=At4g33300 PE=2 SV=3) HSP 1 Score: 53.9 bits (128), Expect = 1.4e-06 Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of PI0025874 vs. ExPASy TrEMBL
Match: A0A5D3CEM5 (Putative disease resistance protein RGA3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00620 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 5.5e-46 Identity = 96/113 (84.96%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of PI0025874 vs. ExPASy TrEMBL
Match: A0A1S3CFN9 (LOW QUALITY PROTEIN: putative disease resistance protein RGA3 OS=Cucumis melo OX=3656 GN=LOC103499942 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 4.2e-38 Identity = 81/97 (83.51%), Postives = 84/97 (86.60%), Query Frame = 0
BLAST of PI0025874 vs. ExPASy TrEMBL
Match: A0A5A7US10 (Putative disease resistance protein RGA3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G00810 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 5.5e-38 Identity = 81/97 (83.51%), Postives = 84/97 (86.60%), Query Frame = 0
BLAST of PI0025874 vs. ExPASy TrEMBL
Match: A0A0A0KBF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426520 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 2.5e-22 Identity = 60/101 (59.41%), Postives = 72/101 (71.29%), Query Frame = 0
BLAST of PI0025874 vs. ExPASy TrEMBL
Match: A0A5A7UWP6 (Disease resistance protein RGA2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G00750 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 4.1e-17 Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 0
BLAST of PI0025874 vs. NCBI nr
Match: TYK10417.1 (putative disease resistance protein RGA3 [Cucumis melo var. makuwa]) HSP 1 Score: 193.4 bits (490), Expect = 1.1e-45 Identity = 96/113 (84.96%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of PI0025874 vs. NCBI nr
Match: XP_008461318.2 (PREDICTED: LOW QUALITY PROTEIN: putative disease resistance protein RGA3 [Cucumis melo]) HSP 1 Score: 167.2 bits (422), Expect = 8.8e-38 Identity = 81/97 (83.51%), Postives = 84/97 (86.60%), Query Frame = 0
BLAST of PI0025874 vs. NCBI nr
Match: KAA0058612.1 (putative disease resistance protein RGA3 [Cucumis melo var. makuwa]) HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37 Identity = 81/97 (83.51%), Postives = 84/97 (86.60%), Query Frame = 0
BLAST of PI0025874 vs. NCBI nr
Match: XP_031745107.1 (putative disease resistance protein RGA4 [Cucumis sativus]) HSP 1 Score: 114.8 bits (286), Expect = 5.2e-22 Identity = 60/101 (59.41%), Postives = 72/101 (71.29%), Query Frame = 0
BLAST of PI0025874 vs. NCBI nr
Match: KAE8646395.1 (hypothetical protein Csa_016171 [Cucumis sativus]) HSP 1 Score: 114.8 bits (286), Expect = 5.2e-22 Identity = 60/101 (59.41%), Postives = 72/101 (71.29%), Query Frame = 0
BLAST of PI0025874 vs. TAIR 10
Match: AT5G47280.1 (ADR1-like 3 ) HSP 1 Score: 54.7 bits (130), Expect = 5.9e-08 Identity = 28/64 (43.75%), Postives = 38/64 (59.38%), Query Frame = 0
BLAST of PI0025874 vs. TAIR 10
Match: AT1G33560.1 (Disease resistance protein (CC-NBS-LRR class) family ) HSP 1 Score: 54.3 bits (129), Expect = 7.7e-08 Identity = 30/85 (35.29%), Postives = 50/85 (58.82%), Query Frame = 0
BLAST of PI0025874 vs. TAIR 10
Match: AT4G33300.1 (ADR1-like 1 ) HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07 Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of PI0025874 vs. TAIR 10
Match: AT4G33300.2 (ADR1-like 1 ) HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07 Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of PI0025874 vs. TAIR 10
Match: AT5G04720.1 (ADR1-like 2 ) HSP 1 Score: 51.6 bits (122), Expect = 5.0e-07 Identity = 26/63 (41.27%), Postives = 38/63 (60.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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