PI0025855 (gene) Melon (PI 482460) v1

Overview


Name	PI0025855
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein MNN4-like
Location	chr08: 2885278 .. 2886275 (+)
RNA-Seq Expression	PI0025855
Synteny	PI0025855

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGACAAGCAATCTAACACTCTTATGAGGTATTTGACCTCCAAACCCACCCACCCCGAGAGCCTTCAAAGGAGAAATGTTCTGATGGTGCTAAGTCAGAGCAAACTCCACCCCGCTGCGAAATCCCTTTCGATGAGAATTCTAGGGAGTTGAATGGTTGTAACTCTGCTTCAGTGCGAGAAGTAGAAAGTGGGGGGAAGGGTAGCACTTCAAAGAGGCCACTTCGGATCCAAGATTTTGATGAGGACTTGGAAGATGATGATGTGGCCGAAGTATTCAAGCTTTCGGTGGCGAGGAAGAAAGCCATACAAAAGCAAGAAGAGAAGGAAAAAGAAGAATGAAGAAAGAGATAAGAAGAGGAAGAAGAGTGTCGTAGAGACGCGACGATGAAGAAAAGCGAAGGGAGAAGGAAGTGCTGAAAAGAAAGGAAATGGAAAAGTCCTCTTCGCCTACGCGAAAACAGAATTTGAGTGGGTTGCGAAGAAAGTCTTGAAGAAAAAGGAAAAGGTCGCAAAAGGCATCATTAAGGCCAAAGAAGCACACAGAAAGTGAAGGCCCTCGCAAAGAAAAGGAAAGAAATAAGGTTGAACGAGCAGGAAAAACTCCTTAACAAAATTAACCAAGTCCCCTTTTTTGTGACAAAGGACAAGGCGACCAAGACTCTCAGCGAAGAGCTTGCTGAAGAGTTTGAAAAGGAAATTGAAGAGTTGAGTCTATTGGAGGACGAAGTGGTGAAGCCTTCAAAGATAAAGAAGGTCACAATAAAGAAGAAAATTTTGAGGGAACAAGTCACCAAGAGACGTGAAGAGAAAGCAAGAAAGAAGGGTCCTGAGGTTAAAACAACGCATGATGAAGAAGAGGACCAAGAAATCAACACGGATGAGACCCTCACCGCCAAAACAATCAGTAAGCACTTCAAGATAGAGAAGGAGCTCTATCCCATCAGAGGTGTTTTGCCTTCATTTATCTTATCGCATGTTCGCGCCTTCAAATGA

mRNA sequence

ATGGCCGACAAGCAATCTAACACTCTTATGAGGTATTTGACCTCCAAACCCACCCACCCCGAGAGCCTTCAAAGGAGAAATGTTCTGATGGTGCTAAAGCAAACTCCACCCCGCTGCGAAATCCCTTTCGATGAGAATTCTAGGGAGTTGAATGGTTGTAACTCTGCTTCAGTGCGAGAAGTAGAAAGTGGGGGGAAGGGTAGCACTTCAAAGAGGCCACTTCGGATCCAAGATTTTGATGAGGACTTGGAAGATGATGATGTGGCCGAAGACAAGGCGACCAAGACTCTCAGCGAAGAGCTTGCTGAAGAGTTTGAAAAGGAAATTGAAGAGTTGAGTCTATTGGAGGACGAAGTGGTGAAGCCTTCAAAGATAAAGAAGGTCACAATAAAGAAGAAAATTTTGAGGGAACAAGTCACCAAGAGACGTGAAGAGAAAGCAAGAAAGAAGGGTCCTGAGGTTAAAACAACGCATGATGAAGAAGAGGACCAAGAAATCAACACGGATGAGACCCTCACCGCCAAAACAATCAGTAAGCACTTCAAGATAGAGAAGGAGCTCTATCCCATCAGAGGTGTTTTGCCTTCATTTATCTTATCGCATGTTCGCGCCTTCAAATGA

Coding sequence (CDS)

ATGGCCGACAAGCAATCTAACACTCTTATGAGGTATTTGACCTCCAAACCCACCCACCCCGAGAGCCTTCAAAGGAGAAATGTTCTGATGGTGCTAAAGCAAACTCCACCCCGCTGCGAAATCCCTTTCGATGAGAATTCTAGGGAGTTGAATGGTTGTAACTCTGCTTCAGTGCGAGAAGTAGAAAGTGGGGGGAAGGGTAGCACTTCAAAGAGGCCACTTCGGATCCAAGATTTTGATGAGGACTTGGAAGATGATGATGTGGCCGAAGACAAGGCGACCAAGACTCTCAGCGAAGAGCTTGCTGAAGAGTTTGAAAAGGAAATTGAAGAGTTGAGTCTATTGGAGGACGAAGTGGTGAAGCCTTCAAAGATAAAGAAGGTCACAATAAAGAAGAAAATTTTGAGGGAACAAGTCACCAAGAGACGTGAAGAGAAAGCAAGAAAGAAGGGTCCTGAGGTTAAAACAACGCATGATGAAGAAGAGGACCAAGAAATCAACACGGATGAGACCCTCACCGCCAAAACAATCAGTAAGCACTTCAAGATAGAGAAGGAGCTCTATCCCATCAGAGGTGTTTTGCCTTCATTTATCTTATCGCATGTTCGCGCCTTCAAATGA

Protein sequence

MADKQSNTLMRYLTSKPTHPESLQRRNVLMVLKQTPPRCEIPFDENSRELNGCNSASVREVESGGKGSTSKRPLRIQDFDEDLEDDDVAEDKATKTLSEELAEEFEKEIEELSLLEDEVVKPSKIKKVTIKKKILREQVTKRREEKARKKGPEVKTTHDEEEDQEINTDETLTAKTISKHFKIEKELYPIRGVLPSFILSHVRAFK

Homology

[Close]

BLAST of PI0025855 vs. ExPASy TrEMBL
Match: A0A5D3DQE5 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001110 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.6e-16
Identity = 62/119 (52.10%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 88  VAEDKATKTLSEELAEEFEKEIEELSLLED-EVVKPSKIKKVTIKKKILREQVTKRREEK 147
           V +DKA KT SE   +E EKE+E+LS  ED EVVKPSK +KVT+K K+L +Q   R+EEK
Sbjct: 46  VKKDKAKKT-SEAYCDELEKELEDLSPSEDEEVVKPSKKRKVTMKMKVLSKQFADRQEEK 105

Query: 148 ARKKGPEVKTTHDEEEDQEINTDETLTAKTISKHFKIEKELYPIRGVLPSFILSHVRAF 206
             KKGP ++   +EEEDQE   ++ L+A  +SK F IEK LYP +G++ +F+ S +RAF
Sbjct: 106 -EKKGPHIEDIKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPFKGIMLAFLASPIRAF 162

[Close]

BLAST of PI0025855 vs. ExPASy TrEMBL
Match: A0A5A7T4G8 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001100 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.5e-14
Identity = 58/99 (58.59%), Postives = 72/99 (72.73%), Query Frame = 0


Query: 92  KATKTLSEELAEEFEKEIEELSLLEDEVVKPS-KIKKVTIKKKILREQVTKRREEKARKK 151
           KA KT SEEL EEFE++++ LS LEDE+V  S K KKVTIKK +L+EQ  KRREEK +KK
Sbjct: 30  KARKTPSEELVEEFERKLDNLSHLEDEMVNSSKKKKKVTIKKSVLKEQFVKRREEKEKKK 89

Query: 152 GPEVKTTHDEEEDQEINTDETLTAKTISKHFKIEKELYP 190
           GP  + T +EEED +   +E     TISK+FKIE EL+P
Sbjct: 90  GPLSEVTLEEEEDLKGEKNEPFCGNTISKYFKIENELFP 128

[Close]

BLAST of PI0025855 vs. ExPASy TrEMBL
Match: A0A5D3E4B8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G00860 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.5e-14
Identity = 58/99 (58.59%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 92  KATKTLSEELAEEFEKEIEELSLLEDEVVKPS-KIKKVTIKKKILREQVTKRREEKARKK 151
           K+ KT SEEL EEFE++++ LS L+DEVVK S K KKVTIKK +L+EQ  KRREEK +KK
Sbjct: 19  KSRKTPSEELVEEFERKLDNLSPLKDEVVKSSKKKKKVTIKKSVLKEQFIKRREEKEKKK 78

Query: 152 GPEVKTTHDEEEDQEINTDETLTAKTISKHFKIEKELYP 190
           GP  + T +EEED +   +E     TISK+FKIE EL+P
Sbjct: 79  GPLSEVTLEEEEDLKGEKNEPFCGNTISKYFKIENELFP 117

[Close]

BLAST of PI0025855 vs. ExPASy TrEMBL
Match: A0A5A7V2S6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002250 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-09
Identity = 50/110 (45.45%), Postives = 75/110 (68.18%), Query Frame = 0


Query: 91  DKATKTLSEELAEEF-EKEIEELSLLEDEVVKPSKIKKV-TIKKKILREQVTKRREEK-A 150
           DK + ++ +  +EEF EK++E LS  EDEVVKP K KK+  +KK +L+EQ++KRREEK  
Sbjct: 2   DKVSLSMEKTPSEEFTEKKLENLSHFEDEVVKPLKKKKIKNMKKSMLKEQLSKRREEKEK 61

Query: 151 RKKGPEVKTTHDEEEDQEINTDETLTAKTISKHFKIEKELYPIRGVLPSF 198
           +KKGP   TT ++E+ ++ N +E  + + +SKHF IE  L+P +G    F
Sbjct: 62  KKKGPRTDTTLEDEDLEQGNENEPFSVEYVSKHFTIENGLFPFKGSCQQF 111

[Close]

BLAST of PI0025855 vs. ExPASy TrEMBL
Match: A0A5A7SVU7 (Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold597G00220 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.1e-08
Identity = 52/106 (49.06%), Postives = 71/106 (66.98%), Query Frame = 0


Query: 92  KATKTLSEELAEEFEKEIEELSLLEDEVVKPSKIK-KVTIKKKILREQVTKRREEKARKK 151
           KA +T SE++ E+FEK++EELS LEDEVVKPSK K KVTIKK++LREQ  K+REE   K+
Sbjct: 71  KAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKSKVTIKKQVLREQFAKKREEN-EKR 130

Query: 152 GPEVKTTHDEEE-DQEINTDE------TLTAKTISKHFKIEKELYP 190
           GP  +   +E++ DQE  T+E      T    ++SK +K   +  P
Sbjct: 131 GPRNEEVQEEKKGDQEGETEELSPQVTTFNHSSLSKLYKFAPQFVP 175

[Close]

BLAST of PI0025855 vs. NCBI nr
Match: TYK25886.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 7.4e-16
Identity = 62/119 (52.10%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 88  VAEDKATKTLSEELAEEFEKEIEELSLLED-EVVKPSKIKKVTIKKKILREQVTKRREEK 147
           V +DKA KT SE   +E EKE+E+LS  ED EVVKPSK +KVT+K K+L +Q   R+EEK
Sbjct: 46  VKKDKAKKT-SEAYCDELEKELEDLSPSEDEEVVKPSKKRKVTMKMKVLSKQFADRQEEK 105

Query: 148 ARKKGPEVKTTHDEEEDQEINTDETLTAKTISKHFKIEKELYPIRGVLPSFILSHVRAF 206
             KKGP ++   +EEEDQE   ++ L+A  +SK F IEK LYP +G++ +F+ S +RAF
Sbjct: 106 -EKKGPHIEDIKEEEEDQESEMEKPLSANEVSKQFMIEKRLYPFKGIMLAFLASPIRAF 162

[Close]

BLAST of PI0025855 vs. NCBI nr
Match: TYK30659.1 (hypothetical protein E5676_scaffold84664G00860 [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 3.1e-14
Identity = 58/99 (58.59%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 92  KATKTLSEELAEEFEKEIEELSLLEDEVVKPS-KIKKVTIKKKILREQVTKRREEKARKK 151
           K+ KT SEEL EEFE++++ LS L+DEVVK S K KKVTIKK +L+EQ  KRREEK +KK
Sbjct: 19  KSRKTPSEELVEEFERKLDNLSPLKDEVVKSSKKKKKVTIKKSVLKEQFIKRREEKEKKK 78

Query: 152 GPEVKTTHDEEEDQEINTDETLTAKTISKHFKIEKELYP 190
           GP  + T +EEED +   +E     TISK+FKIE EL+P
Sbjct: 79  GPLSEVTLEEEEDLKGEKNEPFCGNTISKYFKIENELFP 117

[Close]

BLAST of PI0025855 vs. NCBI nr
Match: KAA0038260.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 3.1e-14
Identity = 58/99 (58.59%), Postives = 72/99 (72.73%), Query Frame = 0


Query: 92  KATKTLSEELAEEFEKEIEELSLLEDEVVKPS-KIKKVTIKKKILREQVTKRREEKARKK 151
           KA KT SEEL EEFE++++ LS LEDE+V  S K KKVTIKK +L+EQ  KRREEK +KK
Sbjct: 30  KARKTPSEELVEEFERKLDNLSHLEDEMVNSSKKKKKVTIKKSVLKEQFVKRREEKEKKK 89

Query: 152 GPEVKTTHDEEEDQEINTDETLTAKTISKHFKIEKELYP 190
           GP  + T +EEED +   +E     TISK+FKIE EL+P
Sbjct: 90  GPLSEVTLEEEEDLKGEKNEPFCGNTISKYFKIENELFP 128

[Close]

BLAST of PI0025855 vs. NCBI nr
Match: KAA0062383.1 (hypothetical protein E6C27_scaffold154G001590 [Cucumis melo var. makuwa] >TYK26595.1 hypothetical protein E5676_scaffold313G002250 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 2.3e-09
Identity = 50/110 (45.45%), Postives = 75/110 (68.18%), Query Frame = 0


Query: 91  DKATKTLSEELAEEF-EKEIEELSLLEDEVVKPSKIKKV-TIKKKILREQVTKRREEK-A 150
           DK + ++ +  +EEF EK++E LS  EDEVVKP K KK+  +KK +L+EQ++KRREEK  
Sbjct: 2   DKVSLSMEKTPSEEFTEKKLENLSHFEDEVVKPLKKKKIKNMKKSMLKEQLSKRREEKEK 61

Query: 151 RKKGPEVKTTHDEEEDQEINTDETLTAKTISKHFKIEKELYPIRGVLPSF 198
           +KKGP   TT ++E+ ++ N +E  + + +SKHF IE  L+P +G    F
Sbjct: 62  KKKGPRTDTTLEDEDLEQGNENEPFSVEYVSKHFTIENGLFPFKGSCQQF 111

[Close]

BLAST of PI0025855 vs. NCBI nr
Match: KAA0035382.1 (gag-protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-07
Identity = 52/106 (49.06%), Postives = 71/106 (66.98%), Query Frame = 0


Query: 92  KATKTLSEELAEEFEKEIEELSLLEDEVVKPSKIK-KVTIKKKILREQVTKRREEKARKK 151
           KA +T SE++ E+FEK++EELS LEDEVVKPSK K KVTIKK++LREQ  K+REE   K+
Sbjct: 71  KAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKSKVTIKKQVLREQFAKKREEN-EKR 130

Query: 152 GPEVKTTHDEEE-DQEINTDE------TLTAKTISKHFKIEKELYP 190
           GP  +   +E++ DQE  T+E      T    ++SK +K   +  P
Sbjct: 131 GPRNEEVQEEKKGDQEGETEELSPQVTTFNHSSLSKLYKFAPQFVP 175

The following BLAST results are available for this feature:

BLAST of PI0025855 vs.


Match Name	E-value	Identity	Description

BLAST of PI0025855 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DQE5	3.6e-16	52.10	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00...	[more]
A0A5A7T4G8	1.5e-14	58.59	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00...	[more]
A0A5D3E4B8	1.5e-14	58.59	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V2S6	1.1e-09	45.45	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SVU7	6.1e-08	49.06	Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of PI0025855 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK25886.1	7.4e-16	52.10	protein MNN4-like [Cucumis melo var. makuwa]	[more]
TYK30659.1	3.1e-14	58.59	hypothetical protein E5676_scaffold84664G00860 [Cucumis melo var. makuwa]	[more]
KAA0038260.1	3.1e-14	58.59	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0062383.1	2.3e-09	45.45	hypothetical protein E6C27_scaffold154G001590 [Cucumis melo var. makuwa] >TYK265...	[more]
KAA0035382.1	1.3e-07	49.06	gag-protease polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of PI0025855 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 95..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0025855.1	PI0025855.1	mRNA