PI0025805 (gene) Melon (PI 482460) v1

Overview


Name	PI0025805
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein MNN4-like
Location	chr08: 5119506 .. 5121393 (-)
RNA-Seq Expression	PI0025805
Synteny	PI0025805

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAAAATGGAAGTTAGGGCAAAAAACTGCAAACTGACAGTTTATTTGAGGAAGATGATGAACCGGGTCCTGCGCGGGTCGTTGGATCGAGTCGTGGGTGCGCAGGTCGGCTAAATGAAGAAGAAAAATAAAAGTTGATGGGGTTGGGAGTCATACACACGTCTGAGAAGAAGCGCAGACGAGGAGAGACGAACGCTTGGCGGGTGGAGTGGATGACATGTGGCGCATTATGAAGGGTCCGAATCTTTCCTATTTGCCAAAAATGCCCTTGGTCTTCTTTTTGCACGTTCTTCTTTGTTAGAACTTCGATTTAAGAGATTTTTGTGGCGTTGGACTCGCAACGGAGTCTAGAATATTATTCTGCATAAAAATAACATTTTAATAAGTGTGTGAATGAAAATGGGGAGAAATACACTAATAAAGTTAGGTCTATTTTAGCACTAACAAAATACTCCCAACTTAAAACTTGTTCGTCCCAAGCAAGCAAATTAAAAACGTGCTAACATTCAGTCATTCATCATGCAAGGGGTTTATACATTGTTTTGCAAAAATTTAAATTCAAATATTCATGCAAAGATTGGTGATGTTTCAAAAAAATGTGCAAGGATTTATATTCATGCCTTAACAATTCATCAAAGTAAATAATTGAGCATCATTTAAACATTCAAAAGAATCAAGCAATCAATTTGAGGTTTGATTTTAATAAAATTCATTCAGCGAGATCATGTTTAGATAAACTTTTAAGTATTGCTACTTCGACTCACTAGATATGCTTTGAAAGGATTAAAAAATGCCCTAGGCTTGCTTTCTCTCTACTCTAAAACGGAAAGGATCCCTCCTTAAACTGGGCCTTCGGTCAAAACATTGAAACTAGTTAGAGAATTCTAAGATAGGGTTGTACGTGTTTTACTAAGGCAAAGGATAGGTTTTTTCCGTCAAGATTCGTGCCTCACTAACATCGGACAATCCTAACTGATCACGAAAAAATTGCTATCGTTCGACTTAACTATACTAAAAATTCTAATTTTTTTTTGCTTTAACCTTGCCATTTTGCATTAACCTTGCACTTTGCTACTTTTTAATTGAGATTCTATTTTTTGGTAGCAAGCTTTTTGCTTAGCTCCGACTTGGCTAACTCTAATCTGAGATTCATCTATTTAGGTTCTTATGTTTGACCGTTCTTTCGATGTTACAACAAGCGAAATTAAGCATTCTATCATTTTCTAAAGATTTTTAGGTTCGTTATGACTCCACAAAGGGGTTTTTCTAATTCATGAGTCAATGAGATGAAAATTTTAAAATGACCTCAATTTCATAAATGGTTCTTTATCTTATTTAAAATCTAATCAAGAAGTACTAAAAGAGGTGTATCATAGGCAATCATCATGAGGCCAGGGCATTTTCTTTTCTTTTTGCAAGCATTCATTGGTGACTAGGTCTTTAAAGTGGCCTCTTTCCATTTGATGGGGCCCTCCCAACGTTCTTGAGTGACACCATCAAAGCGTTTGGTTGGAAATTCTTCAAAGGAACTTCTAAGCTTCAGTTGAACATGGTAAAAAAATTCTATGTCGTAGAATACCACCCCACCAAGTACTATGCGGGGGTAGAGGGCAAGCGTGTCTACTTCAACGATGAAGCCAATAATAGATTGCACGACCTGCCCATGAACGTGGAAAGGCCAGGGCATGTGTTGGTGACTAGACCTTTAAAGAGGCAGGCCAGAAAAGCGTTAGAGACGATCGCATGGCCATGGGCGAAATGGGAAATCACTCCCACTGGAAAATATCAACTATATCCACACCAGCTGACCATTGAGGCGAATGTGTGGAACTTCTTCATAAAAAGAAAATCATGCCAACGCGCCACAATAGCATTGTGCTGCTAG

mRNA sequence

ATGAAAAAAATGGAAGTTAGGGCAAAAAACTGCAAACTGACAGTTTATTTGAGGAAGATGATGAACCGGGTCCTGCGCGGGTCTGACACCATCAAAGCGTTTGGTTGGAAATTCTTCAAAGGAACTTCTAAGCTTCAGTTGAACATGGTAAAAAAATTCTATGTCGTAGAATACCACCCCACCAAGTACTATGCGGGGGTAGAGGGCAAGCGTGTCTACTTCAACGATGAAGCCAATAATAGATTGCACGACCTGCCCATGAACGTGGAAAGGCCAGGGCATGTGTTGGTGACTAGACCTTTAAAGAGGCAGGCCAGAAAAGCGTTAGAGACGATCGCATGGCCATGGGCGAAATGGGAAATCACTCCCACTGGAAAATATCAACTATATCCACACCAGCTGACCATTGAGGCGAATGTGTGGAACTTCTTCATAAAAAGAAAATCATGCCAACGCGCCACAATAGCATTGTGCTGCTAG

Coding sequence (CDS)

ATGAAAAAAATGGAAGTTAGGGCAAAAAACTGCAAACTGACAGTTTATTTGAGGAAGATGATGAACCGGGTCCTGCGCGGGTCTGACACCATCAAAGCGTTTGGTTGGAAATTCTTCAAAGGAACTTCTAAGCTTCAGTTGAACATGGTAAAAAAATTCTATGTCGTAGAATACCACCCCACCAAGTACTATGCGGGGGTAGAGGGCAAGCGTGTCTACTTCAACGATGAAGCCAATAATAGATTGCACGACCTGCCCATGAACGTGGAAAGGCCAGGGCATGTGTTGGTGACTAGACCTTTAAAGAGGCAGGCCAGAAAAGCGTTAGAGACGATCGCATGGCCATGGGCGAAATGGGAAATCACTCCCACTGGAAAATATCAACTATATCCACACCAGCTGACCATTGAGGCGAATGTGTGGAACTTCTTCATAAAAAGAAAATCATGCCAACGCGCCACAATAGCATTGTGCTGCTAG

Protein sequence

MKKMEVRAKNCKLTVYLRKMMNRVLRGSDTIKAFGWKFFKGTSKLQLNMVKKFYVVEYHPTKYYAGVEGKRVYFNDEANNRLHDLPMNVERPGHVLVTRPLKRQARKALETIAWPWAKWEITPTGKYQLYPHQLTIEANVWNFFIKRKSCQRATIALCC

Homology

[Close]

BLAST of PI0025805 vs. ExPASy TrEMBL
Match: A0A5A7SQ81 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00070 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 5.2e-31
Identity = 68/113 (60.18%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 32  KAFGW-KFFKGTSKLQLNMVKKFYVVEYHPTKYYAGVEGKRVYFNDEANNRLHDLPMNVE 91
           +AFGW KFFKGTSK++L +V+KFY  +++  +YYA ++ K  YFN EA N+L++ P + E
Sbjct: 72  EAFGWRKFFKGTSKIRLEVVRKFYASDHNQAEYYAIMDEKSAYFNIEAINKLYNFPFDAE 131

Query: 92  RPGHVLVTRPLKRQARKALETIAWPWAKWEITPTGKYQLYPHQLTIEANVWNF 144
            P HVL+T  LKRQA +ALETIAW  A+++ITPTGKY LYPHQLTIEA+VW F
Sbjct: 132 TPDHVLITATLKRQAMEALETIAWLGAEYDITPTGKYLLYPHQLTIEASVWLF 184

[Close]

BLAST of PI0025805 vs. ExPASy TrEMBL
Match: A0A5A7URT6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00140 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 6.3e-21
Identity = 52/104 (50.00%), Postives = 74/104 (71.15%), Query Frame = 0


Query: 37  KFFKGTSKLQLNMVKKFYVVEYHPTKYYAGVEGKRVYFNDEANNRLHDLPMNVERPGHVL 96
           K  KGTSK++L +V+KFY  + +  +YY  ++GK +YFN EA N+L+DLP + E P   L
Sbjct: 54  KEVKGTSKIRLKVVRKFYTSDLNQAEYYVIMDGKSIYFNVEAINKLYDLPFDAETPEQAL 113

Query: 97  VTRPLKRQARKALETIAWPWAKWEITPTGKYQLYPHQLTIEANV 141
           +T  LKRQAR+AL+TI W   + +IT TG Y LYPH+LT +A++
Sbjct: 114 ITTTLKRQAREALKTIVWLGVECDITLTGNYLLYPHRLTTKASM 157

[Close]

BLAST of PI0025805 vs. ExPASy TrEMBL
Match: A0A5A7U4E3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46449G00020 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.0e-19
Identity = 49/104 (47.12%), Postives = 73/104 (70.19%), Query Frame = 0


Query: 37  KFFKGTSKLQLNMVKKFYVVEYHPTKYYAGVEGKRVYFNDEANNRLHDLPMNVERPGHVL 96
           K  KGTSK++L +++KFY  + +  +YY  ++GK +YFN EA N+L+DLP + + P   L
Sbjct: 97  KEVKGTSKIRLKVIRKFYTSDLNQAEYYVIMDGKSIYFNVEAINKLYDLPFDAKTPEQAL 156

Query: 97  VTRPLKRQARKALETIAWPWAKWEITPTGKYQLYPHQLTIEANV 141
           +T  LKRQAR+AL+TI W   + +IT T  Y LYPH+LT +A++
Sbjct: 157 ITTTLKRQAREALKTIVWLGVECDITLTRNYLLYPHRLTTKASM 200

[Close]

BLAST of PI0025805 vs. ExPASy TrEMBL
Match: A0A5D3DQE5 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001110 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.3e-15
Identity = 48/119 (40.34%), Postives = 68/119 (57.14%), Query Frame = 0


Query: 31  IKAFG-WKFFKGTSKLQLNMVKKFYVVEYHPTKYYAGVEGKRVYFNDEANNRLHDLPMNV 90
           I+AF   KFFKG + ++ ++   FY       K+Y  ++GK+VYF  E  N L+ L  NV
Sbjct: 159 IRAFSQGKFFKGVTTIRADVKNLFYKGYISKKKHYVMIKGKKVYFRPEVINALYRLDDNV 218

Query: 91  ERPGHVLVTRPLKRQARKALETIAWPWAKWEITPTGKYQLYPHQLTIEANVWNFFIKRK 149
              GH +   P ++  + AL  ++WP  KW+ TPTGKYQL+PH L   ANV   F + K
Sbjct: 219 --IGHAIFKNPTQQDMQDALARVSWPGTKWDRTPTGKYQLFPHNLNTAANVRLLFCQEK 275

[Close]

BLAST of PI0025805 vs. ExPASy TrEMBL
Match: A0A5A7V6M5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold683G00020 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.1e-15
Identity = 47/118 (39.83%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 44  KLQLNMVKKFYVVEYHPTKYYAGVEGKRVYFNDEANNRLHDLPMNVERPGHVLVTRPLKR 103
           K+++++V KFY V+++P+  +  +E ++ YFN E  N L++ P + E  G  +VT+  K 
Sbjct: 2   KIRMDVVHKFYDVKFNPSDLFITIEDEKFYFNVEVINELYNSPNDAEYLGQEIVTKSTKG 61

Query: 104 QARKALETIAWPWAKWEITPTG-KYQLYPHQLTIEANVWNFFIKRK---SCQRATIAL 158
            A++AL+ +AWP    E+ P   +YQLYPH LT +ANVW FF K K   +C  +TI++
Sbjct: 62  LAKEALKVVAWPGIMSEVKPMKLRYQLYPH-LTTKANVWMFFTKNKIFPTCYDSTISM 118

[Close]

BLAST of PI0025805 vs. NCBI nr
Match: KAA0031701.1 (hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa] >TYK04411.1 hypothetical protein E5676_scaffold409G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-30
Identity = 68/113 (60.18%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 32  KAFGW-KFFKGTSKLQLNMVKKFYVVEYHPTKYYAGVEGKRVYFNDEANNRLHDLPMNVE 91
           +AFGW KFFKGTSK++L +V+KFY  +++  +YYA ++ K  YFN EA N+L++ P + E
Sbjct: 72  EAFGWRKFFKGTSKIRLEVVRKFYASDHNQAEYYAIMDEKSAYFNIEAINKLYNFPFDAE 131

Query: 92  RPGHVLVTRPLKRQARKALETIAWPWAKWEITPTGKYQLYPHQLTIEANVWNF 144
            P HVL+T  LKRQA +ALETIAW  A+++ITPTGKY LYPHQLTIEA+VW F
Sbjct: 132 TPDHVLITATLKRQAMEALETIAWLGAEYDITPTGKYLLYPHQLTIEASVWLF 184

[Close]

BLAST of PI0025805 vs. NCBI nr
Match: KAA0057357.1 (hypothetical protein E6C27_scaffold280G002180 [Cucumis melo var. makuwa] >TYK30046.1 hypothetical protein E5676_scaffold216G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-20
Identity = 52/104 (50.00%), Postives = 74/104 (71.15%), Query Frame = 0


Query: 37  KFFKGTSKLQLNMVKKFYVVEYHPTKYYAGVEGKRVYFNDEANNRLHDLPMNVERPGHVL 96
           K  KGTSK++L +V+KFY  + +  +YY  ++GK +YFN EA N+L+DLP + E P   L
Sbjct: 54  KEVKGTSKIRLKVVRKFYTSDLNQAEYYVIMDGKSIYFNVEAINKLYDLPFDAETPEQAL 113

Query: 97  VTRPLKRQARKALETIAWPWAKWEITPTGKYQLYPHQLTIEANV 141
           +T  LKRQAR+AL+TI W   + +IT TG Y LYPH+LT +A++
Sbjct: 114 ITTTLKRQAREALKTIVWLGVECDITLTGNYLLYPHRLTTKASM 157

[Close]

BLAST of PI0025805 vs. NCBI nr
Match: KAA0050753.1 (hypothetical protein E6C27_scaffold46449G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 105.5 bits (262), Expect = 4.2e-19
Identity = 49/104 (47.12%), Postives = 73/104 (70.19%), Query Frame = 0


Query: 37  KFFKGTSKLQLNMVKKFYVVEYHPTKYYAGVEGKRVYFNDEANNRLHDLPMNVERPGHVL 96
           K  KGTSK++L +++KFY  + +  +YY  ++GK +YFN EA N+L+DLP + + P   L
Sbjct: 97  KEVKGTSKIRLKVIRKFYTSDLNQAEYYVIMDGKSIYFNVEAINKLYDLPFDAKTPEQAL 156

Query: 97  VTRPLKRQARKALETIAWPWAKWEITPTGKYQLYPHQLTIEANV 141
           +T  LKRQAR+AL+TI W   + +IT T  Y LYPH+LT +A++
Sbjct: 157 ITTTLKRQAREALKTIVWLGVECDITLTRNYLLYPHRLTTKASM 200

[Close]

BLAST of PI0025805 vs. NCBI nr
Match: TYK25886.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 92.0 bits (227), Expect = 4.8e-15
Identity = 48/119 (40.34%), Postives = 68/119 (57.14%), Query Frame = 0


Query: 31  IKAFG-WKFFKGTSKLQLNMVKKFYVVEYHPTKYYAGVEGKRVYFNDEANNRLHDLPMNV 90
           I+AF   KFFKG + ++ ++   FY       K+Y  ++GK+VYF  E  N L+ L  NV
Sbjct: 159 IRAFSQGKFFKGVTTIRADVKNLFYKGYISKKKHYVMIKGKKVYFRPEVINALYRLDDNV 218

Query: 91  ERPGHVLVTRPLKRQARKALETIAWPWAKWEITPTGKYQLYPHQLTIEANVWNFFIKRK 149
              GH +   P ++  + AL  ++WP  KW+ TPTGKYQL+PH L   ANV   F + K
Sbjct: 219 --IGHAIFKNPTQQDMQDALARVSWPGTKWDRTPTGKYQLFPHNLNTAANVRLLFCQEK 275

[Close]

BLAST of PI0025805 vs. NCBI nr
Match: KAA0062900.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 91.7 bits (226), Expect = 6.3e-15
Identity = 47/118 (39.83%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 44  KLQLNMVKKFYVVEYHPTKYYAGVEGKRVYFNDEANNRLHDLPMNVERPGHVLVTRPLKR 103
           K+++++V KFY V+++P+  +  +E ++ YFN E  N L++ P + E  G  +VT+  K 
Sbjct: 2   KIRMDVVHKFYDVKFNPSDLFITIEDEKFYFNVEVINELYNSPNDAEYLGQEIVTKSTKG 61

Query: 104 QARKALETIAWPWAKWEITPTG-KYQLYPHQLTIEANVWNFFIKRK---SCQRATIAL 158
            A++AL+ +AWP    E+ P   +YQLYPH LT +ANVW FF K K   +C  +TI++
Sbjct: 62  LAKEALKVVAWPGIMSEVKPMKLRYQLYPH-LTTKANVWMFFTKNKIFPTCYDSTISM 118

The following BLAST results are available for this feature:

BLAST of PI0025805 vs.


Match Name	E-value	Identity	Description

BLAST of PI0025805 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SQ81	5.2e-31	60.18	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7URT6	6.3e-21	50.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U4E3	2.0e-19	47.12	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DQE5	2.3e-15	40.34	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00...	[more]
A0A5A7V6M5	3.1e-15	39.83	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold683G0002...	[more]

BLAST of PI0025805 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031701.1	1.1e-30	60.18	hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa] >TYK044...	[more]
KAA0057357.1	1.3e-20	50.00	hypothetical protein E6C27_scaffold280G002180 [Cucumis melo var. makuwa] >TYK300...	[more]
KAA0050753.1	4.2e-19	47.12	hypothetical protein E6C27_scaffold46449G00020 [Cucumis melo var. makuwa]	[more]
TYK25886.1	4.8e-15	40.34	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0062900.1	6.3e-15	39.83	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of PI0025805 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0025805.1	PI0025805.1	mRNA