PI0025657 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGTGCCTTTATTATTTTTTATTACTTTCTTTTTTTCTTTTTATTTATTTATGTTTTTTCTTTATAAAGACTTACACAGACATTAAAAATCTTAACTCTTCATCCCAAAAAAAATAATAAAATTAAATTAAATAATAAGAAATAAAATTCATCTTCACCTTCAAGATCGTAACTTTTTCAAATAACCCATGTCGACTTCTTCCGGATTCTCTCAGATTTCTACTCAAAGATCGGTGTCTAACTCGCCGGAAAAGCTTGGGTTTGTTCCTGTCGGTCCGATGCTGGTTTCTGGCACGGATTTGAATCTGGGTTTCTCCGCTAATCTCCGCCGAAGAAACGGTGAGGTTTTTTTTTAAATTTATTTGGTGGGTTTTGTTTTGATTTGATTTGGGAGAGATTTGGAATTGAAATTGGGAACTGAAATTTTCAGGGTCGGTGCCGGAATTCTTTAACTTGCCGGAAAAAATGGCGAATCGAAAGTCTTTGGATTTGTTTCCTCAAGAGGCGGGATTTGGTAACTCAAACGACGTCGATTCGAGGTATGAATTTGAAGAGAAATTCTTCACCGTGTTTTGTTCGTGAGAAATTTCTTGTTTGATGAAATCGATTTCTTGTTTTTAGGGTTTATAAATCGGCTACGGGGGTCCCTCAAACTTCCCAAATGACGATTTTTTACGCCGGCCAAGTTTTTGTGTTCAACAATTTTCCGGCTGATAGAGTCGGCGACGTTATGTATCTAGCCAGTCAAGAGAGCTCGAGATTAAACATCCCTACCGCCGCCGCTGCCGTCGCTGCCGGTCAGCCCATCTTGGTCGGAACTCCTGCCGATTCTTTAAGCTCCACTTCCCCTGTTTCCACTCGCAACCAAACTTCTCCTCCGCCGCCTCCTCCGTCCGTTCCCGGTGGTAATTAACACCACAACAAACCCATATTTAAATTTCATTAATTTCCATCGCCGGAACTTGAAATTTTCATTCTAATCTTATTTCTAATGACTAAATCTTCCCATTTCTGCAGCTCTCCCGATGGCTCGTAAAGCTTCGATTCAGCGTTTCTTGGAGAAGAGAAAGGACAGGTGAGGATTTGAACTTTGAATTTCATTTCATCGAATCAAAATTCACAATTTATTCTACAAAAGTTGAATGGGTTTCTTAACTTCCTCTGTTTTTTTCTTTTTTCTTTTTGTAACAGACTAACTCTGAGAGCGCCATACCAGAGCAGCTCTCCGGTGACGAGCAAGAACGCCGGCGAGAATTCATGGCTGGGATTGGCGGTGCAGTCACAAAATTAGTATTAAGAAATATGAAATTTGAAGTAGAAAGAATGAAGTTTAGATTAAAGAACAAAGGGAGTTTGTTGTTGCCATTTTTGCTTAGGCCTCTGTTTTATGAAAAGCTCTGTTTTTCAGAGGCTATGGTTTGCTTTTCTTCTTAACCTTATCGATTCCTTTGGTCGATAATTTCTTGTAAAATTAATATATATTTCTTTACTTTGTATTCTTTAATGTTTACTAATATCTCCTAATGTTGTTTCTATTGTGGTGTCATGATATTCCATAAAATAACCTTTTTCATTTTGGTCTATTTATTTCAATACTTTTGATTTTAAAGTTAAA TCGTGCCTTTATTATTTTTTATTACTTTCTTTTTTTCTTTTTATTTATTTATGTTTTTTCTTTATAAAGACTTACACAGACATTAAAAATCTTAACTCTTCATCCCAAAAAAAATAATAAAATTAAATTAAATAATAAGAAATAAAATTCATCTTCACCTTCAAGATCGTAACTTTTTCAAATAACCCATGTCGACTTCTTCCGGATTCTCTCAGATTTCTACTCAAAGATCGGTGTCTAACTCGCCGGAAAAGCTTGGGTTTGTTCCTGTCGGTCCGATGCTGGTTTCTGGCACGGATTTGAATCTGGGTTTCTCCGCTAATCTCCGCCGAAGAAACGGGTCGGTGCCGGAATTCTTTAACTTGCCGGAAAAAATGGCGAATCGAAAGTCTTTGGATTTGTTTCCTCAAGAGGCGGGATTTGGTAACTCAAACGACGTCGATTCGAGGGTTTATAAATCGGCTACGGGGGTCCCTCAAACTTCCCAAATGACGATTTTTTACGCCGGCCAAGTTTTTGTGTTCAACAATTTTCCGGCTGATAGAGTCGGCGACGTTATGTATCTAGCCAGTCAAGAGAGCTCGAGATTAAACATCCCTACCGCCGCCGCTGCCGTCGCTGCCGGTCAGCCCATCTTGGTCGGAACTCCTGCCGATTCTTTAAGCTCCACTTCCCCTGTTTCCACTCGCAACCAAACTTCTCCTCCGCCGCCTCCTCCGTCCGTTCCCGGTGCTCTCCCGATGGCTCGTAAAGCTTCGATTCAGCGTTTCTTGGAGAAGAGAAAGGACAGACTAACTCTGAGAGCGCCATACCAGAGCAGCTCTCCGGTGACGAGCAAGAACGCCGGCGAGAATTCATGGCTGGGATTGGCGGTGCAGTCACAAAATTAGTATTAAGAAATATGAAATTTGAAGTAGAAAGAATGAAGTTTAGATTAAAGAACAAAGGGAGTTTGTTGTTGCCATTTTTGCTTAGGCCTCTGTTTTATGAAAAGCTCTGTTTTTCAGAGGCTATGGTTTGCTTTTCTTCTTAACCTTATCGATTCCTTTGGTCGATAATTTCTTGTAAAATTAATATATATTTCTTTACTTTGTATTCTTTAATGTTTACTAATATCTCCTAATGTTGTTTCTATTGTGGTGTCATGATATTCCATAAAATAACCTTTTTCATTTTGGTCTATTTATTTCAATACTTTTGATTTTAAAGTTAAA ATGTCGACTTCTTCCGGATTCTCTCAGATTTCTACTCAAAGATCGGTGTCTAACTCGCCGGAAAAGCTTGGGTTTGTTCCTGTCGGTCCGATGCTGGTTTCTGGCACGGATTTGAATCTGGGTTTCTCCGCTAATCTCCGCCGAAGAAACGGGTCGGTGCCGGAATTCTTTAACTTGCCGGAAAAAATGGCGAATCGAAAGTCTTTGGATTTGTTTCCTCAAGAGGCGGGATTTGGTAACTCAAACGACGTCGATTCGAGGGTTTATAAATCGGCTACGGGGGTCCCTCAAACTTCCCAAATGACGATTTTTTACGCCGGCCAAGTTTTTGTGTTCAACAATTTTCCGGCTGATAGAGTCGGCGACGTTATGTATCTAGCCAGTCAAGAGAGCTCGAGATTAAACATCCCTACCGCCGCCGCTGCCGTCGCTGCCGGTCAGCCCATCTTGGTCGGAACTCCTGCCGATTCTTTAAGCTCCACTTCCCCTGTTTCCACTCGCAACCAAACTTCTCCTCCGCCGCCTCCTCCGTCCGTTCCCGGTGCTCTCCCGATGGCTCGTAAAGCTTCGATTCAGCGTTTCTTGGAGAAGAGAAAGGACAGACTAACTCTGAGAGCGCCATACCAGAGCAGCTCTCCGGTGACGAGCAAGAACGCCGGCGAGAATTCATGGCTGGGATTGGCGGTGCAGTCACAAAATTAG MSTSSGFSQISTQRSVSNSPEKLGFVPVGPMLVSGTDLNLGFSANLRRRNGSVPEFFNLPEKMANRKSLDLFPQEAGFGNSNDVDSRVYKSATGVPQTSQMTIFYAGQVFVFNNFPADRVGDVMYLASQESSRLNIPTAAAAVAAGQPILVGTPADSLSSTSPVSTRNQTSPPPPPPSVPGALPMARKASIQRFLEKRKDRLTLRAPYQSSSPVTSKNAGENSWLGLAVQSQN Homology
BLAST of PI0025657 vs. ExPASy Swiss-Prot
Match: Q84R94 (Protein TIFY 10a OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY10A PE=1 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 7.6e-20 Identity = 69/175 (39.43%), Postives = 99/175 (56.57%), Query Frame = 0
BLAST of PI0025657 vs. ExPASy Swiss-Prot
Match: Q8H395 (Protein TIFY 10b OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY10B PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.9e-18 Identity = 69/177 (38.98%), Postives = 93/177 (52.54%), Query Frame = 0
BLAST of PI0025657 vs. ExPASy Swiss-Prot
Match: A2YNP2 (Protein TIFY 10b OS=Oryza sativa subsp. indica OX=39946 GN=TIFY10B PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.2e-18 Identity = 68/177 (38.42%), Postives = 93/177 (52.54%), Query Frame = 0
BLAST of PI0025657 vs. ExPASy Swiss-Prot
Match: Q9LMA8 (Protein TIFY 10A OS=Arabidopsis thaliana OX=3702 GN=TIFY10A PE=1 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 5.1e-16 Identity = 66/191 (34.55%), Postives = 103/191 (53.93%), Query Frame = 0
BLAST of PI0025657 vs. ExPASy Swiss-Prot
Match: A2XD79 (Protein TIFY 11c OS=Oryza sativa subsp. indica OX=39946 GN=TIFY11C PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 8.1e-14 Identity = 56/167 (33.53%), Postives = 78/167 (46.71%), Query Frame = 0
BLAST of PI0025657 vs. ExPASy TrEMBL
Match: A0A0A0LZM2 (Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G597690 PE=3 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 5.3e-101 Identity = 200/233 (85.84%), Postives = 208/233 (89.27%), Query Frame = 0
BLAST of PI0025657 vs. ExPASy TrEMBL
Match: A0A1S3BPU0 (protein TIFY 10a OS=Cucumis melo OX=3656 GN=LOC103492387 PE=3 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 1.1e-93 Identity = 191/235 (81.28%), Postives = 205/235 (87.23%), Query Frame = 0
BLAST of PI0025657 vs. ExPASy TrEMBL
Match: A0A6J1HBZ2 (protein TIFY 10a-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461447 PE=3 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 1.3e-86 Identity = 180/231 (77.92%), Postives = 197/231 (85.28%), Query Frame = 0
BLAST of PI0025657 vs. ExPASy TrEMBL
Match: A0A6J1JHB0 (protein TIFY 10a-like OS=Cucurbita maxima OX=3661 GN=LOC111485713 PE=3 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 5.0e-83 Identity = 176/231 (76.19%), Postives = 191/231 (82.68%), Query Frame = 0
BLAST of PI0025657 vs. ExPASy TrEMBL
Match: A0A5A7UL09 (Protein TIFY 10a OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001440 PE=3 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 2.8e-81 Identity = 177/237 (74.68%), Postives = 193/237 (81.43%), Query Frame = 0
BLAST of PI0025657 vs. NCBI nr
Match: XP_004144046.1 (protein TIFY 10A [Cucumis sativus] >KGN66322.1 hypothetical protein Csa_006905 [Cucumis sativus]) HSP 1 Score: 377.1 bits (967), Expect = 1.1e-100 Identity = 200/233 (85.84%), Postives = 208/233 (89.27%), Query Frame = 0
BLAST of PI0025657 vs. NCBI nr
Match: XP_038878636.1 (protein TIFY 10a [Benincasa hispida]) HSP 1 Score: 372.9 bits (956), Expect = 2.1e-99 Identity = 199/235 (84.68%), Postives = 210/235 (89.36%), Query Frame = 0
BLAST of PI0025657 vs. NCBI nr
Match: XP_008450950.1 (PREDICTED: protein TIFY 10a [Cucumis melo]) HSP 1 Score: 352.8 bits (904), Expect = 2.2e-93 Identity = 191/235 (81.28%), Postives = 205/235 (87.23%), Query Frame = 0
BLAST of PI0025657 vs. NCBI nr
Match: XP_023516389.1 (protein TIFY 10a-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 331.6 bits (849), Expect = 5.3e-87 Identity = 182/231 (78.79%), Postives = 197/231 (85.28%), Query Frame = 0
BLAST of PI0025657 vs. NCBI nr
Match: XP_022960734.1 (protein TIFY 10a-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 329.3 bits (843), Expect = 2.6e-86 Identity = 180/231 (77.92%), Postives = 197/231 (85.28%), Query Frame = 0
BLAST of PI0025657 vs. TAIR 10
Match: AT1G19180.1 (jasmonate-zim-domain protein 1 ) HSP 1 Score: 86.3 bits (212), Expect = 3.6e-17 Identity = 66/191 (34.55%), Postives = 103/191 (53.93%), Query Frame = 0
BLAST of PI0025657 vs. TAIR 10
Match: AT1G19180.2 (jasmonate-zim-domain protein 1 ) HSP 1 Score: 86.3 bits (212), Expect = 3.6e-17 Identity = 66/191 (34.55%), Postives = 103/191 (53.93%), Query Frame = 0
BLAST of PI0025657 vs. TAIR 10
Match: AT1G74950.1 (TIFY domain/Divergent CCT motif family protein ) HSP 1 Score: 73.2 bits (178), Expect = 3.2e-13 Identity = 58/173 (33.53%), Postives = 90/173 (52.02%), Query Frame = 0
BLAST of PI0025657 vs. TAIR 10
Match: AT5G20900.1 (jasmonate-zim-domain protein 12 ) HSP 1 Score: 60.5 bits (145), Expect = 2.1e-09 Identity = 48/133 (36.09%), Postives = 76/133 (57.14%), Query Frame = 0
BLAST of PI0025657 vs. TAIR 10
Match: AT1G17380.1 (jasmonate-zim-domain protein 5 ) HSP 1 Score: 52.0 bits (123), Expect = 7.6e-07 Identity = 42/131 (32.06%), Postives = 65/131 (49.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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