PI0025566 (gene) Melon (PI 482460) v1

Overview
NamePI0025566
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionHydroxyproline-rich glycoprotein family protein
Locationchr03: 11291121 .. 11292098 (-)
RNA-Seq ExpressionPI0025566
SyntenyPI0025566
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAACCAAACCAATTGCCACTGGTTCCTCAATCTCGAACTCACTCTCCGTCCCCCGTCTCCTCCTCCACAGTTTCTCCAACTCTCTCTCTGTCTGTCGTCTCCTCCTCTGCCGCCCAATCCATCTCCACAGCTTCTCCATCCGCCCTCGCCATTTGATCAAAGTGAACTCTCTCTCCATCCTCCGTTTTCGTCTCCTCCTCCATCACCTCAATGTCCACTATCTCCCCATTTGTCGGGGCAACCTCCTCCGCCACCACCCGAACATCTACTATCGTCTCAGCCTCCTCTCGAACATCCATTCTCTTTCCATCCATTACAAGAGTCTCCTCCTCCTTCACCGGCCGAATCTCCACACTCTCTCCCTCTACCATTGCAGTCTCCTCCTTTGCCACCCGAAGGTCTACAACCACTGCCAACACAACAAACTCGAAACGAATCAGTAGAAATCCCGAAACCAAAACGACATAGAACAAAAGCAGACACTAGAAGGATCGAGCCACCGTATCCATGGTCGACGGAGCAGCGAGGGGTAATCCATGAACTCAAGTACCTTCAAGCAAACAACATACTCACAATCAAGGGAGAAGTGAAATGCAGAAGATGTGAGAGAAAGGATGAGATAGAGTATGACCTAATGAGTAAGTTTGATGAGATGAGGAGGTTTATTGAAAGAGAAAAAGATAATATGCATGATAGAGCTCCATATTGTTGGATAAACCCTATTTTACTAAAGTGCAAATTTTGCAATAAAGAAAAATGTGTAGAGCCAATCATATCTCCAGAAGATGATACTGAAATCAATTGGTTGTTTTTGTTATTGGGAAATTTTCTTGGATGTTTGAAGCTCAGACAACTCAAATATTTTTGTGCTCAAACAAATACTCATAGAACTGGGGCCAAGGATCGTCTTGTTTATCTCACTTATCTTGCTTTATGTAAGCAACTTCAACCCGAGGATCAAATCTTTGATTAG

mRNA sequence

ATGGAGAACCAAACCAATTGCCACTGGTTCCTCAATCTCGAACTCACTCTCCGTCCCCCGTCTCCTCCTCCACAGTTTCTCCAACTCTCTCTCTGTCTGTCGTCTCCTCCTCTGCCGCCCAATCCATCTCCACAGCTTCTCCATCCGCCCTCGCCATTTGATCAAAGTGAACTCTCTCTCCATCCTCCGTTTTCGTCTCCTCCTCCATCACCTCAATGTCCACTATCTCCCCATTTGTCGGGGCAACCTCCTCCGCCACCACCCGAACATCTACTATCGTCTCAGCCTCCTCTCGAACATCCATTCTCTTTCCATCCATTACAAGAGTCTCCTCCTCCTTCACCGGCCGAATCTCCACACTCTCTCCCTCTACCATTGCAGTCTCCTCCTTTGCCACCCGAAGGTCTACAACCACTGCCAACACAACAAACTCGAAACGAATCAGTAGAAATCCCGAAACCAAAACGACATAGAACAAAAGCAGACACTAGAAGGATCGAGCCACCGTATCCATGGTCGACGGAGCAGCGAGGGGTAATCCATGAACTCAAGTACCTTCAAGCAAACAACATACTCACAATCAAGGGAGAAGTGAAATGCAGAAGATGTGAGAGAAAGGATGAGATAGAGTATGACCTAATGAGTAAGTTTGATGAGATGAGGAGGTTTATTGAAAGAGAAAAAGATAATATGCATGATAGAGCTCCATATTGTTGGATAAACCCTATTTTACTAAAGTGCAAATTTTGCAATAAAGAAAAATGTGTAGAGCCAATCATATCTCCAGAAGATGATACTGAAATCAATTGGTTGTTTTTGTTATTGGGAAATTTTCTTGGATGTTTGAAGCTCAGACAACTCAAATATTTTTGTGCTCAAACAAATACTCATAGAACTGGGGCCAAGGATCGTCTTGTTTATCTCACTTATCTTGCTTTATGTAAGCAACTTCAACCCGAGGATCAAATCTTTGATTAG

Coding sequence (CDS)

ATGGAGAACCAAACCAATTGCCACTGGTTCCTCAATCTCGAACTCACTCTCCGTCCCCCGTCTCCTCCTCCACAGTTTCTCCAACTCTCTCTCTGTCTGTCGTCTCCTCCTCTGCCGCCCAATCCATCTCCACAGCTTCTCCATCCGCCCTCGCCATTTGATCAAAGTGAACTCTCTCTCCATCCTCCGTTTTCGTCTCCTCCTCCATCACCTCAATGTCCACTATCTCCCCATTTGTCGGGGCAACCTCCTCCGCCACCACCCGAACATCTACTATCGTCTCAGCCTCCTCTCGAACATCCATTCTCTTTCCATCCATTACAAGAGTCTCCTCCTCCTTCACCGGCCGAATCTCCACACTCTCTCCCTCTACCATTGCAGTCTCCTCCTTTGCCACCCGAAGGTCTACAACCACTGCCAACACAACAAACTCGAAACGAATCAGTAGAAATCCCGAAACCAAAACGACATAGAACAAAAGCAGACACTAGAAGGATCGAGCCACCGTATCCATGGTCGACGGAGCAGCGAGGGGTAATCCATGAACTCAAGTACCTTCAAGCAAACAACATACTCACAATCAAGGGAGAAGTGAAATGCAGAAGATGTGAGAGAAAGGATGAGATAGAGTATGACCTAATGAGTAAGTTTGATGAGATGAGGAGGTTTATTGAAAGAGAAAAAGATAATATGCATGATAGAGCTCCATATTGTTGGATAAACCCTATTTTACTAAAGTGCAAATTTTGCAATAAAGAAAAATGTGTAGAGCCAATCATATCTCCAGAAGATGATACTGAAATCAATTGGTTGTTTTTGTTATTGGGAAATTTTCTTGGATGTTTGAAGCTCAGACAACTCAAATATTTTTGTGCTCAAACAAATACTCATAGAACTGGGGCCAAGGATCGTCTTGTTTATCTCACTTATCTTGCTTTATGTAAGCAACTTCAACCCGAGGATCAAATCTTTGATTAG

Protein sequence

MENQTNCHWFLNLELTLRPPSPPPQFLQLSLCLSSPPLPPNPSPQLLHPPSPFDQSELSLHPPFSSPPPSPQCPLSPHLSGQPPPPPPEHLLSSQPPLEHPFSFHPLQESPPPSPAESPHSLPLPLQSPPLPPEGLQPLPTQQTRNESVEIPKPKRHRTKADTRRIEPPYPWSTEQRGVIHELKYLQANNILTIKGEVKCRRCERKDEIEYDLMSKFDEMRRFIEREKDNMHDRAPYCWINPILLKCKFCNKEKCVEPIISPEDDTEINWLFLLLGNFLGCLKLRQLKYFCAQTNTHRTGAKDRLVYLTYLALCKQLQPEDQIFD
Homology
BLAST of PI0025566 vs. ExPASy TrEMBL
Match: A0A1S3AZB1 (protein PAF1 homolog OS=Cucumis melo OX=3656 GN=LOC103484199 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 2.3e-102
Identity = 227/340 (66.76%), Postives = 247/340 (72.65%), Query Frame = 0

Query: 12  NLELTLRPP--SPPPQFLQLSLCLSSPPLPPNPSPQLLHPPSPFDQSELSLHPPFSSPPP 71
           NL+L+LRPP  SPPP   Q    L S    P PS Q L       QS LSL  P  SP P
Sbjct: 11  NLQLSLRPPFQSPPPPSPQSLFTLHSSFQSPPPSLQSL-------QSLLSLRLPTQSPTP 70

Query: 72  SPQCPLSPHLSGQPPPPPP-EHLL-------SSQPPLEHPFSFHPLQES--PPPSPAESP 131
             Q  LS HLS QPPP PP E LL          PP EHP SFH L ES  PPPSPAE P
Sbjct: 71  PTQSSLSQHLSLQPPPSPPHERLLCVSPQPPHPPPPPEHPLSFHLLLESPPPPPSPAEFP 130

Query: 132 HSLPLPLQSPPLPPEGLQPLPTQ--------------QTRNESVEIPKPKRHRTKADTRR 191
            SLPLPLQSPPLP + LQP PTQ              QT+N+  EIPKPKR RT+AD  R
Sbjct: 131 SSLPLPLQSPPLPFDYLQPPPTQQTQNQPPEIPKPKRQTQNQPPEIPKPKRRRTQADNSR 190

Query: 192 IEPPYPWSTEQRGVIHELKYLQANNILTIKGEVKCRRCERKDEIEYDLMSKFDEMRRFIE 251
           IEPPYPWSTE+  VIH+L+YL+ANNILTIKGEVKC+RC+RKDEIEY+L+SKFDE+RRFIE
Sbjct: 191 IEPPYPWSTEKGAVIHKLEYLEANNILTIKGEVKCKRCDRKDEIEYELISKFDEIRRFIE 250

Query: 252 REKDNMHDRAPYCWINPILLKCKFCNKEKCVEPIISPEDDTEINWLFLLLGNFLGCLKLR 311
           REKDNMHDRAP  W+NPILL C FCNKE+CVEPIIS E ++ INWLFLLLGNFLGCLKL 
Sbjct: 251 REKDNMHDRAPDRWVNPILLNCNFCNKEECVEPIIS-EANSNINWLFLLLGNFLGCLKLS 310

Query: 312 QLKYFCAQTNTHRTGAKDRLVYLTYLALCKQLQP-EDQIF 325
           QLKYFC QTN HRTGAKDRL+YLTYLALCKQLQP  DQIF
Sbjct: 311 QLKYFCTQTNIHRTGAKDRLIYLTYLALCKQLQPNSDQIF 342

BLAST of PI0025566 vs. ExPASy TrEMBL
Match: A0A0A0LAK2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153700 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 1.5e-85
Identity = 185/281 (65.84%), Postives = 203/281 (72.24%), Query Frame = 0

Query: 58  LSLHPPFSSPPPSPQCPLSPHLSGQPPPPPPEHLLSSQPPLEH--PFSFHPLQESPPPS- 117
           LSL PPF SPPPSPQ  LS  L  Q   PP    LS  PP  H  P    PL+ SP PS 
Sbjct: 15  LSLRPPFQSPPPSPQTLLSLRLPTQSLTPPLSLHLSLHPPRPHPPPPQHRPLEFSPLPST 74

Query: 118 PAESPHSLPLPLQSPP-LPPEGLQPLPTQQTRNE---------------SVEIPKPKRHR 177
            A+ P SL LP QSP  LPP+ LQP  TQQT+NE               + E+P+PKR R
Sbjct: 75  AADPPSSLLLPSQSPDLLPPDRLQPPSTQQTQNEADEEIRPTKRTQNEPNEELPRPKRTR 134

Query: 178 TKADTRRIEPPYPWSTEQRGVIHELKYLQANNILTIKGEVKCRRCERKDEIEYDLMSKFD 237
            +ADT RIEPPYPWSTEQ  +IH+L+YLQANNI TIKGEVKC+RC+RKDEIEYDLMSKF+
Sbjct: 135 KQADTSRIEPPYPWSTEQGAIIHKLEYLQANNIRTIKGEVKCKRCKRKDEIEYDLMSKFE 194

Query: 238 EMRRFIEREKDNMHDRAPYCWINPILLKCKFCNKEKCVEPIISPEDDTEINWLFLLLGNF 297
           EM +FIEREK NMHDRAP CW NP LL CKFCNKEKCVEPII   +D +INWLFLLLGNF
Sbjct: 195 EMIKFIEREKCNMHDRAPNCWTNPTLLNCKFCNKEKCVEPIIPAGNDNKINWLFLLLGNF 254

Query: 298 LGCLKLRQLKYFCAQTNTHRTGAKDRLVYLTYLALCKQLQP 320
           LG LKL QLK+FC QT  HRTGAKDRLVY TY  LCKQLQP
Sbjct: 255 LGRLKLTQLKHFCTQTKIHRTGAKDRLVYFTYFGLCKQLQP 295

BLAST of PI0025566 vs. ExPASy TrEMBL
Match: A0A1S3CK70 (uncharacterized protein LOC103501397 OS=Cucumis melo OX=3656 GN=LOC103501397 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.0e-65
Identity = 131/215 (60.93%), Postives = 156/215 (72.56%), Query Frame = 0

Query: 121 SLPLPLQSPPLPPEGLQP----LPTQQTRNESVEIPKP------------KRHRTKADTR 180
           SL  P   PPLPP+  QP    LP+Q T  ES  I +P            +R RT+AD  
Sbjct: 10  SLRFPSLRPPLPPQYSQPPTSTLPSQITNEESEAITRPNNETSNNQQQQRRRRRTRADMT 69

Query: 181 RIEPPYPWSTEQRGVIHELKYLQANNILTIKGEVKCRRCERKDEIEYDLMSKFDEMRRFI 240
           RIEPPYPWST++R V+HELKYLQ NNI+TIKGEV C++CE K E+EYDLM+K +E+ RF 
Sbjct: 70  RIEPPYPWSTDRRAVVHELKYLQVNNIMTIKGEVICKKCEMKYEMEYDLMNKVNEITRFF 129

Query: 241 EREKDNMHDRAPYCWINPILLKCKFCNKEKCVEPIISPEDDTEINWLFLLLGNFLGCLKL 300
           E E D+MHDRAP CW NP L  C  CN+EKCV P+ S ++DT+INWLFL LG FLGCLKL
Sbjct: 130 EEEIDSMHDRAPSCWTNPNLPNCSLCNEEKCVMPVTS-QEDTKINWLFLFLGQFLGCLKL 189

Query: 301 RQLKYFCAQTNTHRTGAKDRLVYLTYLALCKQLQP 320
           RQLKYFC QTN HRTGAK+RL+YL+Y  L +QLQP
Sbjct: 190 RQLKYFCTQTNIHRTGAKNRLLYLSYRTLFRQLQP 223

BLAST of PI0025566 vs. ExPASy TrEMBL
Match: A0A6J1I8I0 (uncharacterized protein KIAA0754-like OS=Cucurbita maxima OX=3661 GN=LOC111470967 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.7e-65
Identity = 130/219 (59.36%), Postives = 159/219 (72.60%), Query Frame = 0

Query: 112 PPSPAESPHSL-PLPLQSPPLPPEGLQPLPTQQTRNESVEIPKPKRHRTKADTRRIEPPY 171
           P  P   P ++   P QS  +P         Q T   S   P+ +R RT+ADTRRIEPPY
Sbjct: 395 PNQPMAIPQTVEETPNQSTTIP---------QATNGHSTSRPRRRRSRTRADTRRIEPPY 454

Query: 172 PWSTEQRGVIHELKYLQANNILTIKGEVKCRRCERKDEIEYDLMSKFDEMRRFIEREKDN 231
           PWS EQR  IH L+YLQ+NNI+ IKG+V+C++CER  EIEY+LM+KFDE+ RFIERE+DN
Sbjct: 455 PWSAEQRASIHNLEYLQSNNIVMIKGDVRCKKCERYYEIEYNLMNKFDEIARFIERERDN 514

Query: 232 MHDRAPYCWINPILLKCKFCNKEKCVEPIISPEDD----TEINWLFLLLGNFLGCLKLRQ 291
           MHDRAP CW NPIL  C+ C +E CVEP+I  E+D      INWLFLLLG  +G LKL+Q
Sbjct: 515 MHDRAPICWKNPILPNCEHCREENCVEPMIPDEEDDNQFRRINWLFLLLGQLIGRLKLKQ 574

Query: 292 LKYFCAQTNTHRTGAKDRLVYLTYLALCKQLQPEDQIFD 326
           LKYFCA T  HRTGAKDRL++LTYLALCKQLQP +++F+
Sbjct: 575 LKYFCAHTYNHRTGAKDRLIFLTYLALCKQLQPSNRLFN 604

BLAST of PI0025566 vs. ExPASy TrEMBL
Match: A0A0A0KMQ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G332030 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 9.5e-64
Identity = 126/218 (57.80%), Postives = 156/218 (71.56%), Query Frame = 0

Query: 103 SFHPLQESPPPSPAESPHSLPLPLQSPPLPPEGLQPLPTQQTRNESVEIPKP-KRHRTKA 162
           S  P    PPP+P     S  LP    P       P P  +T N+  +  +  +R RT+A
Sbjct: 17  SLRPPSAQPPPAPEYPQLSSTLPSSQIPNEESNATPQPNIETSNDQQQHRRRLRRRRTRA 76

Query: 163 DTRRIEPPYPWSTEQRGVIHELKYLQANNILTIKGEVKCRRCERKDEIEYDLMSKFDEMR 222
           D  RIEPPYPW+T++R V+HELKYLQ+NNI+ IKGEV C++CE K EIEYDLM+K +E+ 
Sbjct: 77  DMTRIEPPYPWATDKRAVVHELKYLQSNNIMKIKGEVICKKCEMKYEIEYDLMNKVNEIT 136

Query: 223 RFIEREKDNMHDRAPYCWINPILLKCKFCNKEKCVEPIISPEDDTEINWLFLLLGNFLGC 282
           RF E E D+MHDRAP CW  P L  C FCN+EKCV P+IS EDD++INWLFL LG FLGC
Sbjct: 137 RFFEEEIDSMHDRAPNCWTKPNLPNCNFCNEEKCVMPVISKEDDSKINWLFLFLGQFLGC 196

Query: 283 LKLRQLKYFCAQTNTHRTGAKDRLVYLTYLALCKQLQP 320
           L+L+QLK+FCAQ+N HRTGAK+RL+YL+Y AL  QLQP
Sbjct: 197 LRLKQLKHFCAQSNIHRTGAKNRLLYLSYRALFHQLQP 234

BLAST of PI0025566 vs. NCBI nr
Match: XP_008439384.1 (PREDICTED: protein PAF1 homolog [Cucumis melo])

HSP 1 Score: 382.1 bits (980), Expect = 4.8e-102
Identity = 227/340 (66.76%), Postives = 247/340 (72.65%), Query Frame = 0

Query: 12  NLELTLRPP--SPPPQFLQLSLCLSSPPLPPNPSPQLLHPPSPFDQSELSLHPPFSSPPP 71
           NL+L+LRPP  SPPP   Q    L S    P PS Q L       QS LSL  P  SP P
Sbjct: 11  NLQLSLRPPFQSPPPPSPQSLFTLHSSFQSPPPSLQSL-------QSLLSLRLPTQSPTP 70

Query: 72  SPQCPLSPHLSGQPPPPPP-EHLL-------SSQPPLEHPFSFHPLQES--PPPSPAESP 131
             Q  LS HLS QPPP PP E LL          PP EHP SFH L ES  PPPSPAE P
Sbjct: 71  PTQSSLSQHLSLQPPPSPPHERLLCVSPQPPHPPPPPEHPLSFHLLLESPPPPPSPAEFP 130

Query: 132 HSLPLPLQSPPLPPEGLQPLPTQ--------------QTRNESVEIPKPKRHRTKADTRR 191
            SLPLPLQSPPLP + LQP PTQ              QT+N+  EIPKPKR RT+AD  R
Sbjct: 131 SSLPLPLQSPPLPFDYLQPPPTQQTQNQPPEIPKPKRQTQNQPPEIPKPKRRRTQADNSR 190

Query: 192 IEPPYPWSTEQRGVIHELKYLQANNILTIKGEVKCRRCERKDEIEYDLMSKFDEMRRFIE 251
           IEPPYPWSTE+  VIH+L+YL+ANNILTIKGEVKC+RC+RKDEIEY+L+SKFDE+RRFIE
Sbjct: 191 IEPPYPWSTEKGAVIHKLEYLEANNILTIKGEVKCKRCDRKDEIEYELISKFDEIRRFIE 250

Query: 252 REKDNMHDRAPYCWINPILLKCKFCNKEKCVEPIISPEDDTEINWLFLLLGNFLGCLKLR 311
           REKDNMHDRAP  W+NPILL C FCNKE+CVEPIIS E ++ INWLFLLLGNFLGCLKL 
Sbjct: 251 REKDNMHDRAPDRWVNPILLNCNFCNKEECVEPIIS-EANSNINWLFLLLGNFLGCLKLS 310

Query: 312 QLKYFCAQTNTHRTGAKDRLVYLTYLALCKQLQP-EDQIF 325
           QLKYFC QTN HRTGAKDRL+YLTYLALCKQLQP  DQIF
Sbjct: 311 QLKYFCTQTNIHRTGAKDRLIYLTYLALCKQLQPNSDQIF 342

BLAST of PI0025566 vs. NCBI nr
Match: XP_011652763.1 (uncharacterized protein LOC105435088 [Cucumis sativus])

HSP 1 Score: 326.2 bits (835), Expect = 3.1e-85
Identity = 185/281 (65.84%), Postives = 203/281 (72.24%), Query Frame = 0

Query: 58  LSLHPPFSSPPPSPQCPLSPHLSGQPPPPPPEHLLSSQPPLEH--PFSFHPLQESPPPS- 117
           LSL PPF SPPPSPQ  LS  L  Q   PP    LS  PP  H  P    PL+ SP PS 
Sbjct: 15  LSLRPPFQSPPPSPQTLLSLRLPTQSLTPPLSLHLSLHPPRPHPPPPQHRPLEFSPLPST 74

Query: 118 PAESPHSLPLPLQSPP-LPPEGLQPLPTQQTRNE---------------SVEIPKPKRHR 177
            A+ P SL LP QSP  LPP+ LQP  TQQT+NE               + E+P+PKR R
Sbjct: 75  AADPPSSLLLPSQSPDLLPPDRLQPPSTQQTQNEADEEIRPTKRTQNEPNEELPRPKRTR 134

Query: 178 TKADTRRIEPPYPWSTEQRGVIHELKYLQANNILTIKGEVKCRRCERKDEIEYDLMSKFD 237
            +ADT RIEPPYPWSTEQ  +IH+L+YLQANNI TIKGEVKC+RC+RKDEIEYDLMSKF+
Sbjct: 135 KQADTSRIEPPYPWSTEQGAIIHKLEYLQANNIRTIKGEVKCKRCKRKDEIEYDLMSKFE 194

Query: 238 EMRRFIEREKDNMHDRAPYCWINPILLKCKFCNKEKCVEPIISPEDDTEINWLFLLLGNF 297
           EM +FIEREK NMHDRAP CW NP LL CKFCNKEKCVEPII   +D +INWLFLLLGNF
Sbjct: 195 EMIKFIEREKCNMHDRAPNCWTNPTLLNCKFCNKEKCVEPIIPAGNDNKINWLFLLLGNF 254

Query: 298 LGCLKLRQLKYFCAQTNTHRTGAKDRLVYLTYLALCKQLQP 320
           LG LKL QLK+FC QT  HRTGAKDRLVY TY  LCKQLQP
Sbjct: 255 LGRLKLTQLKHFCTQTKIHRTGAKDRLVYFTYFGLCKQLQP 295

BLAST of PI0025566 vs. NCBI nr
Match: KAE8650389.1 (hypothetical protein Csa_011234 [Cucumis sativus])

HSP 1 Score: 292.4 bits (747), Expect = 5.0e-75
Identity = 143/202 (70.79%), Postives = 158/202 (78.22%), Query Frame = 0

Query: 133 PEGLQPLPTQQTRNE---------------SVEIPKPKRHRTKADTRRIEPPYPWSTEQR 192
           P  LQP  TQQT+NE               + E+P+PKR R +ADT RIEPPYPWSTEQ 
Sbjct: 5   PLELQPPSTQQTQNEADEEIRPTKRTQNEPNEELPRPKRTRKQADTSRIEPPYPWSTEQG 64

Query: 193 GVIHELKYLQANNILTIKGEVKCRRCERKDEIEYDLMSKFDEMRRFIEREKDNMHDRAPY 252
            +IH+L+YLQANNI TIKGEVKC+RC+RKDEIEYDLMSKF+EM +FIEREK NMHDRAP 
Sbjct: 65  AIIHKLEYLQANNIRTIKGEVKCKRCKRKDEIEYDLMSKFEEMIKFIEREKCNMHDRAPN 124

Query: 253 CWINPILLKCKFCNKEKCVEPIISPEDDTEINWLFLLLGNFLGCLKLRQLKYFCAQTNTH 312
           CW NP LL CKFCNKEKCVEPII   +D +INWLFLLLGNFLG LKL QLK+FC QT  H
Sbjct: 125 CWTNPTLLNCKFCNKEKCVEPIIPAGNDNKINWLFLLLGNFLGRLKLTQLKHFCTQTKIH 184

Query: 313 RTGAKDRLVYLTYLALCKQLQP 320
           RTGAKDRLVY TY  LCKQLQP
Sbjct: 185 RTGAKDRLVYFTYFGLCKQLQP 206

BLAST of PI0025566 vs. NCBI nr
Match: XP_038895979.1 (junction-mediating and -regulatory protein-like [Benincasa hispida])

HSP 1 Score: 292.0 bits (746), Expect = 6.5e-75
Identity = 171/332 (51.51%), Postives = 200/332 (60.24%), Query Frame = 0

Query: 3   NQTNCHWFLNLELTLRPPSPPPQFLQLSLCLSSPPLPPNPSPQLLHPPSPFDQSELSLHP 62
           NQ +  W  NLEL+LR PSPPP        L SPP                         
Sbjct: 7   NQNDYQWQSNLELSLRLPSPPP--------LESPP------------------------- 66

Query: 63  PFSSPPPSPQCPLSPHLSGQPPPPPPEHLLSSQPPLEHPFSFHPLQESPPPSPAESPHSL 122
                               PPPP P       PPLE P         PPPSP E P   
Sbjct: 67  --------------------PPPPYP-------PPLESP---------PPPSPLEYPLLS 126

Query: 123 PLPLQSPPLPPEGLQPLPTQQTRNES------VEI----PKPKRHRTKADTRRIEPPYPW 182
                SP   P   + +PTQ     S      +EI    P+P+R RT+AD  RIEPPYPW
Sbjct: 127 TTTSLSPRKTPNESEEIPTQHNNETSNHQQQPMEIVEPQPRPRRRRTRADMTRIEPPYPW 186

Query: 183 STEQRGVIHELKYLQANNILTIKGEVKCRRCERKDEIEYDLMSKFDEMRRFIEREKDNMH 242
           ST++R VIHELKYLQ+NNI+TIKGEVKC++CE+K E+EYDLM+KF+E+ RFIE EKD+MH
Sbjct: 187 STDRRAVIHELKYLQSNNIVTIKGEVKCKKCEQKYEMEYDLMNKFNEIARFIEYEKDSMH 246

Query: 243 DRAPYCWINPILLKCKFCNKEKCVEPIISPEDDTEINWLFLLLGNFLGCLKLRQLKYFCA 302
           DRAP CW  PIL  C  CNKE+CVEP+IS ED T+INWLFLLLG FLGCLKL+QLKYFCA
Sbjct: 247 DRAPKCWTKPILPNCNLCNKERCVEPVISEEDYTKINWLFLLLGKFLGCLKLKQLKYFCA 269

Query: 303 QTNTHRTGAKDRLVYLTYLALCKQLQPEDQIF 325
           QTN HRTGAK+RL+YL YL LC QLQP +++F
Sbjct: 307 QTNIHRTGAKNRLLYLIYLTLCYQLQPSNELF 269

BLAST of PI0025566 vs. NCBI nr
Match: KAG7011696.1 (hypothetical protein SDJN02_26602, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 262.7 bits (670), Expect = 4.2e-66
Identity = 130/218 (59.63%), Postives = 163/218 (74.77%), Query Frame = 0

Query: 112 PPSPAESPHSLPLPLQSPPLPPEGLQPLPTQQTRNESVEIPKPKRHRTKADTRRIEPPYP 171
           P +  E+P+      Q+    P     +P Q T   S   P+ +R RT+ADTRRIEPPYP
Sbjct: 209 PQTVEETPNQSTTIHQAIEQTPNQSTTIP-QATNGHSTSRPRRRRSRTRADTRRIEPPYP 268

Query: 172 WSTEQRGVIHELKYLQANNILTIKGEVKCRRCERKDEIEYDLMSKFDEMRRFIEREKDNM 231
           WS EQR  IH L+YLQ+NNI+TIKG+V+C++CER  EIEY+LM+KFDE+ RFIERE+DNM
Sbjct: 269 WSAEQRASIHNLEYLQSNNIVTIKGDVRCKKCERFYEIEYNLMNKFDEIARFIERERDNM 328

Query: 232 HDRAPYCWINPILLKCKFCNKEKCVEPIISPEDD----TEINWLFLLLGNFLGCLKLRQL 291
           HDRAP CW NPIL  C++C +E CVEP+I  E+D    + INWLFLLLG  +G LKL+QL
Sbjct: 329 HDRAPICWKNPILPNCEYCREENCVEPMIPDEEDDNQFSRINWLFLLLGQLIGRLKLKQL 388

Query: 292 KYFCAQTNTHRTGAKDRLVYLTYLALCKQLQPEDQIFD 326
           KYFCA T  HRTGAKDRL++LTYLALCKQLQP +++F+
Sbjct: 389 KYFCAHTYNHRTGAKDRLIFLTYLALCKQLQPSNRLFN 425

BLAST of PI0025566 vs. TAIR 10
Match: AT1G49330.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 157.1 bits (396), Expect = 2.3e-38
Identity = 121/302 (40.07%), Postives = 164/302 (54.30%), Query Frame = 0

Query: 24  PQFLQLSLCLSSPPLPPNPSPQLLHPPSPFDQSELSLHPPFSSPPPSPQCPLSPHLSGQP 83
           P  L L     S  + P  SP  + PP  F        P   +  P+P   L+   S  P
Sbjct: 45  PLSLTLGSTSYSSQIRPVKSPVPIAPPPEF--------PGPVTTWPTPADFLATR-SMVP 104

Query: 84  PPPPPEHLLSSQPPLEHPFSFHPLQESPPPSPAESPHSLPLPLQSPPLPPEGLQPLPTQQ 143
            PPPP H    Q PL   +  +  Q++P P P    H  P    +P  P   L P P ++
Sbjct: 105 DPPPPSH----QIPL---WMSNYFQQTPNP-PQLVTHFFPPSGLAP--PSSNLTPPPVKR 164

Query: 144 TRNESVEIPKPKRH-RTKADTRRIEPPYPWSTEQRGVIHELKYLQANNILTIKGEVKCRR 203
               SV I + +     K+DT  I PP+PW+T +RG I  L+YL++N I TI GEV+CR 
Sbjct: 165 PVTGSVRIYRSRSTVSKKSDT--ISPPFPWATNRRGEIQSLEYLESNQITTITGEVQCRH 224

Query: 204 CERKDEIEYDLMSKFDEMRRFIEREKDNMHDRAPYCWINPILLKCKFCNKEKCVEPIISP 263
           CE+  ++ Y+L  +F E+ +F   EK  M DRA   W  P   +C+ C +EK V+P+I+ 
Sbjct: 225 CEKVYQVSYNLRERFAEVVKFYLTEKRKMRDRAHKDWAYPEQRRCELCGREKAVKPVIA- 284

Query: 264 EDDTEINWLFLLLGNFLGCLKLRQLKYFCAQTNTHRTGAKDRLVYLTYLALCKQLQPEDQ 323
           E  ++INWLFLLLG  LG   L QLK FC  +  HRTGAKDR++YLTY+ LCK LQP+  
Sbjct: 285 ERKSQINWLFLLLGQTLGFCTLEQLKNFCKHSKNHRTGAKDRVLYLTYMGLCKMLQPKSD 324

Query: 324 IF 325
           +F
Sbjct: 345 LF 324

BLAST of PI0025566 vs. TAIR 10
Match: AT2G16190.1 (BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1); Has 77 Blast hits to 77 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 13; Plants - 56; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 148.7 bits (374), Expect = 8.3e-36
Identity = 113/304 (37.17%), Postives = 155/304 (50.99%), Query Frame = 0

Query: 27  LQLSLCLSSPPLPPNPSPQLLHPPSPFDQSE----LSLHPPFSSPPPSPQ-CPLSPHLSG 86
           L LSL L + P         L P    +Q E    L+  PP ++ P  PQ   ++   +G
Sbjct: 7   LDLSLRLYTQPKKTVNEKNGLVPQRQEEQGEVMQLLTSDPPQNTQPSPPQPNDMTSFANG 66

Query: 87  QPPPPPPEHLLSSQPP-----LEHPFSFHPLQESPPPSPAESPHSLPLPLQSPPLPPEGL 146
                 P   L    P     +  P  + P +E  PP       ++ L       PP G 
Sbjct: 67  TNHVIVPTQALEQAVPPPNVSVRTPLPYQPSEEVLPPPQLNQVATVALATPRRGRPPGG- 126

Query: 147 QPLPTQQTRNESVEIPKPKRHRTKADTRRIEPPYPWSTEQRGVIHELKYLQANNILTIKG 206
                Q  RN    +   +R+      R I PPYPW+T++ G I   + L +NNI  I G
Sbjct: 127 -----QARRNSKRPVAGVERN---VGDREIVPPYPWATKKPGKIQSFRDLSSNNINVISG 186

Query: 207 EVKCRRCERKDEIEYDLMSKFDEMRRFIEREKDNMHDRAPYCWINPILLKCKFCNKEKCV 266
           +V C+ C+R D +EY+L  KF E+  +I+  K+ M  RAP  W  P L+ C+ C  E  +
Sbjct: 187 QVHCKTCDRTDTVEYNLEEKFSELYGYIKVNKEEMRHRAPGSWSTPKLIPCRTCKSE--M 246

Query: 267 EPIISPEDDTEINWLFLLLGNFLGCLKLRQLKYFCAQTNTHRTGAKDRLVYLTYLALCKQ 321
           +P++S E   EINWLFLLLG  LGC  L QL+YFC   + HRTG+KDR+VY+TYL+LCKQ
Sbjct: 247 KPVMS-ERKEEINWLFLLLGQMLGCCTLDQLRYFCQLNSKHRTGSKDRVVYITYLSLCKQ 298

BLAST of PI0025566 vs. TAIR 10
Match: AT2G16190.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 96.7 bits (239), Expect = 3.7e-20
Identity = 91/271 (33.58%), Postives = 127/271 (46.86%), Query Frame = 0

Query: 27  LQLSLCLSSPPLPPNPSPQLLHPPSPFDQSE----LSLHPPFSSPPPSPQ-CPLSPHLSG 86
           L LSL L + P         L P    +Q E    L+  PP ++ P  PQ   ++   +G
Sbjct: 7   LDLSLRLYTQPKKTVNEKNGLVPQRQEEQGEVMQLLTSDPPQNTQPSPPQPNDMTSFANG 66

Query: 87  QPPPPPPEHLLSSQPP-----LEHPFSFHPLQESPPPSPAESPHSLPLPLQSPPLPPEGL 146
                 P   L    P     +  P  + P +E  PP       ++ L       PP G 
Sbjct: 67  TNHVIVPTQALEQAVPPPNVSVRTPLPYQPSEEVLPPPQLNQVATVALATPRRGRPPGG- 126

Query: 147 QPLPTQQTRNESVEIPKPKRHRTKADTRRIEPPYPWSTEQRGVIHELKYLQANNILTIKG 206
                Q  RN    +   +R+      R I PPYPW+T++ G I   + L +NNI  I G
Sbjct: 127 -----QARRNSKRPVAGVERN---VGDREIVPPYPWATKKPGKIQSFRDLSSNNINVISG 186

Query: 207 EVKCRRCERKDEIEYDLMSKFDEMRRFIEREKDNMHDRAPYCWINPILLKCKFCNKEKCV 266
           +V C+ C+R D +EY+L  KF E+  +I+  K+ M  RAP  W  P L+ C+ C  E  +
Sbjct: 187 QVHCKTCDRTDTVEYNLEEKFSELYGYIKVNKEEMRHRAPGSWSTPKLIPCRTCKSE--M 246

Query: 267 EPIISPEDDTEINWLFLLLGNFLGCLKLRQL 288
           +P++S E   EINWLFLLLG  LGC  L QL
Sbjct: 247 KPVMS-ERKEEINWLFLLLGQMLGCCTLDQL 265

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3AZB12.3e-10266.76protein PAF1 homolog OS=Cucumis melo OX=3656 GN=LOC103484199 PE=4 SV=1[more]
A0A0A0LAK21.5e-8565.84Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153700 PE=4 SV=1[more]
A0A1S3CK701.0e-6560.93uncharacterized protein LOC103501397 OS=Cucumis melo OX=3656 GN=LOC103501397 PE=... [more]
A0A6J1I8I01.7e-6559.36uncharacterized protein KIAA0754-like OS=Cucurbita maxima OX=3661 GN=LOC11147096... [more]
A0A0A0KMQ29.5e-6457.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G332030 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_008439384.14.8e-10266.76PREDICTED: protein PAF1 homolog [Cucumis melo][more]
XP_011652763.13.1e-8565.84uncharacterized protein LOC105435088 [Cucumis sativus][more]
KAE8650389.15.0e-7570.79hypothetical protein Csa_011234 [Cucumis sativus][more]
XP_038895979.16.5e-7551.51junction-mediating and -regulatory protein-like [Benincasa hispida][more]
KAG7011696.14.2e-6659.63hypothetical protein SDJN02_26602, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
AT1G49330.12.3e-3840.07hydroxyproline-rich glycoprotein family protein [more]
AT2G16190.18.3e-3637.17BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein fam... [more]
AT2G16190.23.7e-2033.58FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..165
NoneNo IPR availablePANTHERPTHR34272EXPRESSED PROTEINcoord: 70..323

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0025566.1PI0025566.1mRNA