PI0025187 (gene) Melon (PI 482460) v1

Overview


Name	PI0025187
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	hybrid signal transduction histidine kinase L
Location	chr10: 18630034 .. 18631232 (+)
RNA-Seq Expression	PI0025187
Synteny	PI0025187

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTACTTTAAATAGTTAATTTTCTTATAATGCTCTAAACTATATCCTAATTTTTATCTCCAACAATAAGCAAAATACCAATTCCTTCTCTTCATTAAAACTCAAAATTTAAAGAATTTCCCTCAAAGAATATCTCTTTAGCTGTCTACCTCTTTACCAAAAGAAAGTTCCTCCCTTTTTGACCTCTTTCTCACTCTCTCTTAAACCCATTTCTTTTCTTATTATAAATTTTCTTCTTTTTTTTTTAATTAATTTCTTTTTTTTAAAAAAAAAACCTCTTAGAATCTCATCTCATTCATTATACATAACCCTCTTCCCAATGCTACCTTGTTGCTTCTTTGTTGAGTAAATTCCATATCTCTCCCTTCTCTTCCACTCAAAGCACCACCACTTCCATTTCCATTTCAAATTACTAAATACCATTACCCAATCCAATCCAATCCCTCCACTTCCTTAATTTCTCCTAAACCTTAAGCGGACATGTCGGAACTTCAACAACAACAACAACCACCTCAGCAGCAGCAGCAACAACAGCCAGCTTATGTTTATCCCGACACCGCCGCCACGTCCGCCGGCAGCCAAGTTCCTCCGTCCCACCATTCCAACGGCTCATTTGGGGCAGTTTTTATAGTTCTTGCCGTTATTGTTGTCATTTCAGCTCTTGCTTGTTTCCTTGGCCGTCTCTGTAACCGGCGAGTTGAAAACCACCAGAGGCCGAAGCCGGAGAAAAACCACGGCGGCGCTCGACCCACTAGAGGAAAAGAACCTAAATTGCATCCTGATAAAGAAGGAGACATTGAATTTGGATTTGATTTGAGAAACCCAAATGGGAAAGGCAAATTCCCATCTGGTGGCAATGGAAATGGCAATGGAAACGGAGGAAGCAAAGGGAAAGGCAATGGTAATGGGCCTATTGGACCTAATGGGCTTAATGGGCCTAATGGCCATGGAAATAGCTTCAAACCCTTTGAAAATGGTGGTGAAACAAGAAGTGAAATCAAACATACAGACCATCATGAAGGAGATTTCAATTTCAAAGCTGCAGGGCATCATCATGTTTGATGGTATTTGTAAAACAATATAGCAAAAACATGAAAATGCTCAAATTCATCGTATCGAGTTATAGCAGTGTGTTTTTTTTTTTTTTTTCAATTTTAATTTGATGTTTTTCTAATCTAATGAGTAATGAGAAGGTTCAAT

mRNA sequence

AGTACTTTAAATAGTTAATTTTCTTATAATGCTCTAAACTATATCCTAATTTTTATCTCCAACAATAAGCAAAATACCAATTCCTTCTCTTCATTAAAACTCAAAATTTAAAGAATTTCCCTCAAAGAATATCTCTTTAGCTGTCTACCTCTTTACCAAAAGAAAGTTCCTCCCTTTTTGACCTCTTTCTCACTCTCTCTTAAACCCATTTCTTTTCTTATTATAAATTTTCTTCTTTTTTTTTTAATTAATTTCTTTTTTTTAAAAAAAAAACCTCTTAGAATCTCATCTCATTCATTATACATAACCCTCTTCCCAATGCTACCTTGTTGCTTCTTTGTTGAGTAAATTCCATATCTCTCCCTTCTCTTCCACTCAAAGCACCACCACTTCCATTTCCATTTCAAATTACTAAATACCATTACCCAATCCAATCCAATCCCTCCACTTCCTTAATTTCTCCTAAACCTTAAGCGGACATGTCGGAACTTCAACAACAACAACAACCACCTCAGCAGCAGCAGCAACAACAGCCAGCTTATGTTTATCCCGACACCGCCGCCACGTCCGCCGGCAGCCAAGTTCCTCCGTCCCACCATTCCAACGGCTCATTTGGGGCAGTTTTTATAGTTCTTGCCGTTATTGTTGTCATTTCAGCTCTTGCTTGTTTCCTTGGCCGTCTCTGTAACCGGCGAGTTGAAAACCACCAGAGGCCGAAGCCGGAGAAAAACCACGGCGGCGCTCGACCCACTAGAGGAAAAGAACCTAAATTGCATCCTGATAAAGAAGGAGACATTGAATTTGGATTTGATTTGAGAAACCCAAATGGGAAAGGCAAATTCCCATCTGGTGGCAATGGAAATGGCAATGGAAACGGAGGAAGCAAAGGGAAAGGCAATGGTAATGGGCCTATTGGACCTAATGGGCTTAATGGGCCTAATGGCCATGGAAATAGCTTCAAACCCTTTGAAAATGGTGGTGAAACAAGAAGTGAAATCAAACATACAGACCATCATGAAGGAGATTTCAATTTCAAAGCTGCAGGGCATCATCATGTTTGATGGTATTTGTAAAACAATATAGCAAAAACATGAAAATGCTCAAATTCATCGTATCGAGTTATAGCAGTGTGTTTTTTTTTTTTTTTTCAATTTTAATTTGATGTTTTTCTAATCTAATGAGTAATGAGAAGGTTCAAT

Coding sequence (CDS)

ATGTCGGAACTTCAACAACAACAACAACCACCTCAGCAGCAGCAGCAACAACAGCCAGCTTATGTTTATCCCGACACCGCCGCCACGTCCGCCGGCAGCCAAGTTCCTCCGTCCCACCATTCCAACGGCTCATTTGGGGCAGTTTTTATAGTTCTTGCCGTTATTGTTGTCATTTCAGCTCTTGCTTGTTTCCTTGGCCGTCTCTGTAACCGGCGAGTTGAAAACCACCAGAGGCCGAAGCCGGAGAAAAACCACGGCGGCGCTCGACCCACTAGAGGAAAAGAACCTAAATTGCATCCTGATAAAGAAGGAGACATTGAATTTGGATTTGATTTGAGAAACCCAAATGGGAAAGGCAAATTCCCATCTGGTGGCAATGGAAATGGCAATGGAAACGGAGGAAGCAAAGGGAAAGGCAATGGTAATGGGCCTATTGGACCTAATGGGCTTAATGGGCCTAATGGCCATGGAAATAGCTTCAAACCCTTTGAAAATGGTGGTGAAACAAGAAGTGAAATCAAACATACAGACCATCATGAAGGAGATTTCAATTTCAAAGCTGCAGGGCATCATCATGTTTGA

Protein sequence

MSELQQQQQPPQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVENHQRPKPEKNHGGARPTRGKEPKLHPDKEGDIEFGFDLRNPNGKGKFPSGGNGNGNGNGGSKGKGNGNGPIGPNGLNGPNGHGNSFKPFENGGETRSEIKHTDHHEGDFNFKAAGHHHV

Homology

[Close]

BLAST of PI0025187 vs. ExPASy TrEMBL
Match: A0A5A7ST81 (Hybrid signal transduction histidine kinase L OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001050 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.6e-90
Identity = 183/195 (93.85%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MSELQQQQQPP--QQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI 60
           MSELQQQQ+ P  QQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI
Sbjct: 1   MSELQQQQEQPQQQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI 60

Query: 61  SALACFLGRLCNRRVENHQRPKPEKNHGGARPTRGKEPKLHPDKEGDIEFGFDLRNPNGK 120
           SALACFLGRLCNRRVENHQRPKPEK+H GARPTRGKEPKLHPDKEGDIEFGFDLRNP+GK
Sbjct: 61  SALACFLGRLCNRRVENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGK 120

Query: 121 GKFPSGGNGNGNGNGGSKGKGNGNGPIGPNGLNGPNGHGNSFKPFENGGETRSEIKHTDH 180
           GKFP GGNGNGNGNGGSKGKGNGNGPI   GLNGPNGHGNSFKPFENGGETRSEIKHTDH
Sbjct: 121 GKFPPGGNGNGNGNGGSKGKGNGNGPI---GLNGPNGHGNSFKPFENGGETRSEIKHTDH 180

Query: 181 HEGDFNFKAAGHHHV 194
           HEGDFNFKA GHHHV
Sbjct: 181 HEGDFNFKAGGHHHV 192

[Close]

BLAST of PI0025187 vs. ExPASy TrEMBL
Match: E5GBJ1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.6e-90
Identity = 183/195 (93.85%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MSELQQQQQPP--QQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI 60
           MSELQQQQ+ P  QQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI
Sbjct: 1   MSELQQQQEQPQQQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI 60

Query: 61  SALACFLGRLCNRRVENHQRPKPEKNHGGARPTRGKEPKLHPDKEGDIEFGFDLRNPNGK 120
           SALACFLGRLCNRRVENHQRPKPEK+H GARPTRGKEPKLHPDKEGDIEFGFDLRNP+GK
Sbjct: 61  SALACFLGRLCNRRVENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGK 120

Query: 121 GKFPSGGNGNGNGNGGSKGKGNGNGPIGPNGLNGPNGHGNSFKPFENGGETRSEIKHTDH 180
           GKFP GGNGNGNGNGGSKGKGNGNGPI   GLNGPNGHGNSFKPFENGGETRSEIKHTDH
Sbjct: 121 GKFPPGGNGNGNGNGGSKGKGNGNGPI---GLNGPNGHGNSFKPFENGGETRSEIKHTDH 180

Query: 181 HEGDFNFKAAGHHHV 194
           HEGDFNFKA GHHHV
Sbjct: 181 HEGDFNFKAGGHHHV 192

[Close]

BLAST of PI0025187 vs. ExPASy TrEMBL
Match: A0A1S3BF63 (hybrid signal transduction histidine kinase L OS=Cucumis melo OX=3656 GN=LOC103489006 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.6e-90
Identity = 183/195 (93.85%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MSELQQQQQPP--QQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI 60
           MSELQQQQ+ P  QQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI
Sbjct: 1   MSELQQQQEQPQQQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI 60

Query: 61  SALACFLGRLCNRRVENHQRPKPEKNHGGARPTRGKEPKLHPDKEGDIEFGFDLRNPNGK 120
           SALACFLGRLCNRRVENHQRPKPEK+H GARPTRGKEPKLHPDKEGDIEFGFDLRNP+GK
Sbjct: 61  SALACFLGRLCNRRVENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGK 120

Query: 121 GKFPSGGNGNGNGNGGSKGKGNGNGPIGPNGLNGPNGHGNSFKPFENGGETRSEIKHTDH 180
           GKFP GGNGNGNGNGGSKGKGNGNGPI   GLNGPNGHGNSFKPFENGGETRSEIKHTDH
Sbjct: 121 GKFPPGGNGNGNGNGGSKGKGNGNGPI---GLNGPNGHGNSFKPFENGGETRSEIKHTDH 180

Query: 181 HEGDFNFKAAGHHHV 194
           HEGDFNFKA GHHHV
Sbjct: 181 HEGDFNFKAGGHHHV 192

[Close]

BLAST of PI0025187 vs. ExPASy TrEMBL
Match: A0A0A0KTP5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G601520 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.1e-88
Identity = 182/194 (93.81%), Postives = 186/194 (95.88%), Query Frame = 0


Query: 1   MSELQQQQQPPQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVISA 60
           MSEL QQQQP +QQQQQQPAYVYPDTAATSAGSQVPP HHSNGSFGAVFIVLAVIVVISA
Sbjct: 1   MSEL-QQQQPQRQQQQQQPAYVYPDTAATSAGSQVPPPHHSNGSFGAVFIVLAVIVVISA 60

Query: 61  LACFLGRLCNRRVENHQRPKPEKNHGGARPTRGKEPKLHPDKEGDIEFGFDLRNPNGKGK 120
           LACFLGRLCNRRVENHQRPKPEK+H GARPTRGKEPKLHPDKEGDIEFGFDLRNP+GKGK
Sbjct: 61  LACFLGRLCNRRVENHQRPKPEKSHSGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGKGK 120

Query: 121 FPSGGNGN-GNGNGGSKGKGNGNGPIGPNGLNGPNGHGNSFKPFENGGETRSEIKHTDHH 180
           FPSGGNG+ GNGNGGSKGKGNGNGPI   GLNGPNGHGNSFKPFENGGETRSEIKHTDHH
Sbjct: 121 FPSGGNGSTGNGNGGSKGKGNGNGPI---GLNGPNGHGNSFKPFENGGETRSEIKHTDHH 180

Query: 181 EGDFNFKAAGHHHV 194
           EGDFNFKAAGHHHV
Sbjct: 181 EGDFNFKAAGHHHV 190

[Close]

BLAST of PI0025187 vs. ExPASy TrEMBL
Match: A0A6J1GWS9 (uncharacterized protein LOC111458233 OS=Cucurbita moschata OX=3662 GN=LOC111458233 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 5.1e-57
Identity = 135/180 (75.00%), Postives = 141/180 (78.33%), Query Frame = 0


Query: 13  QQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRR 72
           QQQQQQPA VYP+TAA   GSQ PPSHHSNGSFGAVFIVLAVI+VIS +AC LGRLCNRR
Sbjct: 5   QQQQQQPALVYPNTAA--VGSQPPPSHHSNGSFGAVFIVLAVILVISTVACLLGRLCNRR 64

Query: 73  VENHQRPKPEKNHGGARPTRGKEPKLHPDKEGDIEFGFDLRNPNGKGKFPSGGNGNGNGN 132
            EN QR KPEK HGGARP RGKEPKLHPDKEGDIEFG DLRNPNGKGK PSGGNG     
Sbjct: 65  AEN-QRAKPEKTHGGARP-RGKEPKLHPDKEGDIEFGLDLRNPNGKGKAPSGGNGG---- 124

Query: 133 GGSKGKGNGNGPIGPNGLNGPNGHGNSFKPFENGGETRSEIKHT--DHHEGDFNFKAAGH 191
                KGNG+GP      NGPNGH + FKPFENGGE R +IKH   DHHEGDF FKAA H
Sbjct: 125 ----TKGNGHGP------NGPNGHSHGFKPFENGGEMRGQIKHADDDHHEGDFKFKAAAH 166

[Close]

BLAST of PI0025187 vs. NCBI nr
Match: XP_008446202.1 (PREDICTED: hybrid signal transduction histidine kinase L [Cucumis melo] >ADN33832.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0034312.1 hybrid signal transduction histidine kinase L [Cucumis melo var. makuwa] >TYK15608.1 hybrid signal transduction histidine kinase L [Cucumis melo var. makuwa])

HSP 1 Score: 342.0 bits (876), Expect = 3.3e-90
Identity = 183/195 (93.85%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MSELQQQQQPP--QQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI 60
           MSELQQQQ+ P  QQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI
Sbjct: 1   MSELQQQQEQPQQQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVI 60

Query: 61  SALACFLGRLCNRRVENHQRPKPEKNHGGARPTRGKEPKLHPDKEGDIEFGFDLRNPNGK 120
           SALACFLGRLCNRRVENHQRPKPEK+H GARPTRGKEPKLHPDKEGDIEFGFDLRNP+GK
Sbjct: 61  SALACFLGRLCNRRVENHQRPKPEKSHAGARPTRGKEPKLHPDKEGDIEFGFDLRNPSGK 120

Query: 121 GKFPSGGNGNGNGNGGSKGKGNGNGPIGPNGLNGPNGHGNSFKPFENGGETRSEIKHTDH 180
           GKFP GGNGNGNGNGGSKGKGNGNGPI   GLNGPNGHGNSFKPFENGGETRSEIKHTDH
Sbjct: 121 GKFPPGGNGNGNGNGGSKGKGNGNGPI---GLNGPNGHGNSFKPFENGGETRSEIKHTDH 180

Query: 181 HEGDFNFKAAGHHHV 194
           HEGDFNFKA GHHHV
Sbjct: 181 HEGDFNFKAGGHHHV 192

[Close]

BLAST of PI0025187 vs. NCBI nr
Match: XP_011655621.2 (la-related protein Larp4B [Cucumis sativus])

HSP 1 Score: 334.7 bits (857), Expect = 5.2e-88
Identity = 183/197 (92.89%), Postives = 186/197 (94.42%), Query Frame = 0


Query: 1   MSELQQ---QQQPPQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVV 60
           MSELQQ   QQQ  QQQQQQQPAYVYPDTAATSAGSQVPP HHSNGSFGAVFIVLAVIVV
Sbjct: 1   MSELQQQQPQQQQQQQQQQQQPAYVYPDTAATSAGSQVPPPHHSNGSFGAVFIVLAVIVV 60

Query: 61  ISALACFLGRLCNRRVENHQRPKPEKNHGGARPTRGKEPKLHPDKEGDIEFGFDLRNPNG 120
           ISALACFLGRLCNRRVENHQRPKPEK+H GARPTRGKEPKLHPDKEGDIEFGFDLRNP+G
Sbjct: 61  ISALACFLGRLCNRRVENHQRPKPEKSHSGARPTRGKEPKLHPDKEGDIEFGFDLRNPSG 120

Query: 121 KGKFPSGGNGN-GNGNGGSKGKGNGNGPIGPNGLNGPNGHGNSFKPFENGGETRSEIKHT 180
           KGKFPSGGNG+ GNGNGGSKGKGNGNGPI   GLNGPNGHGNSFKPFENGGETRSEIKHT
Sbjct: 121 KGKFPSGGNGSTGNGNGGSKGKGNGNGPI---GLNGPNGHGNSFKPFENGGETRSEIKHT 180

Query: 181 DHHEGDFNFKAAGHHHV 194
           DHHEGDFNFKAAGHHHV
Sbjct: 181 DHHEGDFNFKAAGHHHV 194

[Close]

BLAST of PI0025187 vs. NCBI nr
Match: KAE8648720.1 (hypothetical protein Csa_008998 [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 2.0e-87
Identity = 182/196 (92.86%), Postives = 185/196 (94.39%), Query Frame = 0


Query: 1   MSELQQ---QQQPPQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVV 60
           MSELQQ   QQQ  QQQQQQQPAYVYPDTAATSAGSQVPP HHSNGSFGAVFIVLAVIVV
Sbjct: 1   MSELQQQQPQQQQQQQQQQQQPAYVYPDTAATSAGSQVPPPHHSNGSFGAVFIVLAVIVV 60

Query: 61  ISALACFLGRLCNRRVENHQRPKPEKNHGGARPTRGKEPKLHPDKEGDIEFGFDLRNPNG 120
           ISALACFLGRLCNRRVENHQRPKPEK+H GARPTRGKEPKLHPDKEGDIEFGFDLRNP+G
Sbjct: 61  ISALACFLGRLCNRRVENHQRPKPEKSHSGARPTRGKEPKLHPDKEGDIEFGFDLRNPSG 120

Query: 121 KGKFPSGGNGN-GNGNGGSKGKGNGNGPIGPNGLNGPNGHGNSFKPFENGGETRSEIKHT 180
           KGKFPSGGNG+ GNGNGGSKGKGNGNGPI   GLNGPNGHGNSFKPFENGGETRSEIKHT
Sbjct: 121 KGKFPSGGNGSTGNGNGGSKGKGNGNGPI---GLNGPNGHGNSFKPFENGGETRSEIKHT 180

Query: 181 DHHEGDFNFKAAGHHH 193
           DHHEGDFNFKAAGHHH
Sbjct: 181 DHHEGDFNFKAAGHHH 193

[Close]

BLAST of PI0025187 vs. NCBI nr
Match: XP_038892720.1 (uncharacterized protein LOC120081701 [Benincasa hispida])

HSP 1 Score: 291.6 bits (745), Expect = 5.0e-75
Identity = 169/193 (87.56%), Postives = 171/193 (88.60%), Query Frame = 0


Query: 1   MSEL-QQQQQPPQQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVIS 60
           MSEL QQQQQ PQQQQQQQPA+VYP+TAAT  GSQ PPSHHSNGSFGAVFIVLAVIVVIS
Sbjct: 1   MSELQQQQQQQPQQQQQQQPAFVYPNTAAT-VGSQPPPSHHSNGSFGAVFIVLAVIVVIS 60

Query: 61  ALACFLGRLCNRRVENHQRPKPEKNHGGARPTRGKEPKLHPDKEGDIEFGFDLRNPNG-K 120
           ALACFLGRLCNRRVEN QRPKPEK H GARP RGKEPKLHPDKEGDIEFGFDLRNPNG K
Sbjct: 61  ALACFLGRLCNRRVENGQRPKPEKTHSGARP-RGKEPKLHPDKEGDIEFGFDLRNPNGNK 120

Query: 121 GKFPSGGNGNGNGNGGSKGKGNGNGPIGPNGLNGPNGHGNSFKPFENGGETRSEIKHTDH 180
           GKFPS G     GNGGSKGK NGNG    NG NGPNGHGNSFKPFENGGETRSEIKHTDH
Sbjct: 121 GKFPSSG-----GNGGSKGKSNGNG----NGTNGPNGHGNSFKPFENGGETRSEIKHTDH 180

Query: 181 HEGDFNFKAAGHH 192
           HEGDFNFKAAGHH
Sbjct: 181 HEGDFNFKAAGHH 182

[Close]

BLAST of PI0025187 vs. NCBI nr
Match: XP_022956516.1 (uncharacterized protein LOC111458233 [Cucurbita moschata])

HSP 1 Score: 230.7 bits (587), Expect = 1.1e-56
Identity = 135/180 (75.00%), Postives = 141/180 (78.33%), Query Frame = 0


Query: 13  QQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRR 72
           QQQQQQPA VYP+TAA   GSQ PPSHHSNGSFGAVFIVLAVI+VIS +AC LGRLCNRR
Sbjct: 5   QQQQQQPALVYPNTAA--VGSQPPPSHHSNGSFGAVFIVLAVILVISTVACLLGRLCNRR 64

Query: 73  VENHQRPKPEKNHGGARPTRGKEPKLHPDKEGDIEFGFDLRNPNGKGKFPSGGNGNGNGN 132
            EN QR KPEK HGGARP RGKEPKLHPDKEGDIEFG DLRNPNGKGK PSGGNG     
Sbjct: 65  AEN-QRAKPEKTHGGARP-RGKEPKLHPDKEGDIEFGLDLRNPNGKGKAPSGGNGG---- 124

Query: 133 GGSKGKGNGNGPIGPNGLNGPNGHGNSFKPFENGGETRSEIKHT--DHHEGDFNFKAAGH 191
                KGNG+GP      NGPNGH + FKPFENGGE R +IKH   DHHEGDF FKAA H
Sbjct: 125 ----TKGNGHGP------NGPNGHSHGFKPFENGGEMRGQIKHADDDHHEGDFKFKAAAH 166

[Close]

BLAST of PI0025187 vs. TAIR 10
Match: AT1G70470.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23530.1); Has 64 Blast hits to 64 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 10; Plants - 43; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 5.8e-13
Identity = 60/149 (40.27%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 12  QQQQQQQPAYVYPDTAATSAGSQVPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNR 71
           Q Q+ QQP  VYP T+++++ S  P S  S+GSFG  FIVLA I+V++ALAC  GRLCNR
Sbjct: 4   QPQEFQQP-QVYPSTSSSTSSSFSPSSSGSSGSFGTAFIVLAAILVLAALACVFGRLCNR 63

Query: 72  RVENHQRPKPEKNHGGARPTRGKEPKL-----HPDKEGDIEFGFDLRNPNGKGKFPSGGN 131
             + H+     K     +P+  K  ++      P + GD+EFGFD++ P    K P+G N
Sbjct: 64  GGKQHKDKNNNKASKHEKPSSKKSREIRPVEREPRERGDVEFGFDMKRPGPMSK-PTGRN 123

Query: 132 G-----------NGNGNGGSKGKGNGNGP 145
           G            G G GG  GKG    P
Sbjct: 124 GGDIEFGFDNKRGGGGGGGGGGKGGKRPP 150

[Close]

BLAST of PI0025187 vs. TAIR 10
Match: AT1G23530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70470.1); Has 38 Blast hits to 38 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 5.1e-09
Identity = 71/182 (39.01%), Postives = 89/182 (48.90%), Query Frame = 0


Query: 14  QQQQQPAYVYPDT---AATSAGSQVPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCN 73
           QQ QQP  VYP+          ++   S  S+G+FG VFIVLAVI V+SALAC  GRLCN
Sbjct: 7   QQMQQPIVVYPNAYNKQYPDPSTKPSSSSGSSGNFGTVFIVLAVIFVLSALACVFGRLCN 66

Query: 74  R--RVENHQRPK-PEKNHGGARPTRGKEP-KLHPDKEGDIEFGFDLRNPNGKGKFPSGGN 133
           R  R    Q  K P+     ++ +R   P +  P + GD++FGFD++ P    K PSG +
Sbjct: 67  RESRAAKQQHSKHPKHEKASSKKSREIRPVEREPRERGDMDFGFDMKRPEPIEK-PSGRD 126

Query: 134 G---------NGNGNGGSKGKGNGNGPIGPNGLNGPNGHGNSFKPFENGGETRSEIKHTD 180
           G         N  G  G +G G G GP  PN       H   FK  ENG          D
Sbjct: 127 GGEDIEFGFDNKRGERGREG-GGGGGPPPPN-----IKHAVRFKLPENG----------D 171

The following BLAST results are available for this feature:

BLAST of PI0025187 vs.


Match Name	E-value	Identity	Description

BLAST of PI0025187 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7ST81	1.6e-90	93.85	Hybrid signal transduction histidine kinase L OS=Cucumis melo var. makuwa OX=119...	[more]
E5GBJ1	1.6e-90	93.85	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BF63	1.6e-90	93.85	hybrid signal transduction histidine kinase L OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0KTP5	1.1e-88	93.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G601520 PE=4 SV=1	[more]
A0A6J1GWS9	5.1e-57	75.00	uncharacterized protein LOC111458233 OS=Cucurbita moschata OX=3662 GN=LOC1114582...	[more]

BLAST of PI0025187 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446202.1	3.3e-90	93.85	PREDICTED: hybrid signal transduction histidine kinase L [Cucumis melo] >ADN3383...	[more]
XP_011655621.2	5.2e-88	92.89	la-related protein Larp4B [Cucumis sativus]	[more]
KAE8648720.1	2.0e-87	92.86	hypothetical protein Csa_008998 [Cucumis sativus]	[more]
XP_038892720.1	5.0e-75	87.56	uncharacterized protein LOC120081701 [Benincasa hispida]	[more]
XP_022956516.1	1.1e-56	75.00	uncharacterized protein LOC111458233 [Cucurbita moschata]	[more]

BLAST of PI0025187 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70470.1	5.8e-13	40.27	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G23530.1	5.1e-09	39.01	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..137
None	No IPR available	PANTHER	PTHR33429:SF7	OS02G0708000 PROTEIN	coord: 1..181
None	No IPR available	PANTHER	PTHR33429	OS02G0708000 PROTEIN-RELATED	coord: 1..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0025187.1	PI0025187.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016301	kinase activity