PI0025036 (gene) Melon (PI 482460) v1

Overview


Name	PI0025036
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr06: 23969119 .. 23969328 (+)
RNA-Seq Expression	PI0025036
Synteny	PI0025036

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATAATGGAGGTGCTCCACAAGGGCATTTACAAGAACTCAATGAGGAAATCATGCAACGCTTGGAGACGTTAATCAATGTGAGGTTAGACAAACTAGAACAAAGGTTACAAGTTAGGGAAAGACCTGAAGTAAGGGGACGGGTTGTGGGGGATCATGAGGAGGAAGAAGATTCAGAGCAAATGAATCTGACTCTGACTCTGTAA

mRNA sequence

ATGGCGGATAATGGAGGTGCTCCACAAGGGCATTTACAAGAACTCAATGAGGAAATCATGCAACGCTTGGAGACGTTAATCAATGTGAGGTTAGACAAACTAGAACAAAGGTTACAAGTTAGGGAAAGACCTGAAGTAAGGGGACGGGTTGTGGGGGATCATGAGGAGGAAGAAGATTCAGAGCAAATGAATCTGACTCTGACTCTGTAA

Coding sequence (CDS)

ATGGCGGATAATGGAGGTGCTCCACAAGGGCATTTACAAGAACTCAATGAGGAAATCATGCAACGCTTGGAGACGTTAATCAATGTGAGGTTAGACAAACTAGAACAAAGGTTACAAGTTAGGGAAAGACCTGAAGTAAGGGGACGGGTTGTGGGGGATCATGAGGAGGAAGAAGATTCAGAGCAAATGAATCTGACTCTGACTCTGTAA

Protein sequence

MADNGGAPQGHLQELNEEIMQRLETLINVRLDKLEQRLQVRERPEVRGRVVGDHEEEEDSEQMNLTLTL

Homology

[Close]

BLAST of PI0025036 vs. ExPASy TrEMBL
Match: A0A5A7TC25 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00440 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.1e-12
Identity = 43/62 (69.35%), Postives = 51/62 (82.26%), Query Frame = 0


Query: 1  MADNGGAPQGHLQELNEEIMQRLETLINVRLDKLEQRLQVRERPEVRGRVVGDHEEEEDS 60
          MA NGG PQG LQ  +E++MQRLETLINV+LD LEQR Q +ERPEVR +VVG+ + EEDS
Sbjct: 1  MAGNGGTPQGPLQGHSEKVMQRLETLINVKLDILEQRFQAKERPEVRRQVVGNLDVEEDS 60

Query: 61 EQ 63
          EQ
Sbjct: 61 EQ 62

[Close]

BLAST of PI0025036 vs. ExPASy TrEMBL
Match: A0A5D3BY01 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00400 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-05
Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 0


Query: 10 GHLQE-LNEEIMQRLETLINVRLDKLEQRLQVRERPEVRGRVVGDHEEEEDSEQ 63
          GH +E +N+EIMQ LE + N R+D+LEQRLQ +ERPEVR RVV + ++EE+S Q
Sbjct: 14 GHYRESINKEIMQCLEIINNARIDRLEQRLQAKERPEVRRRVVREPKQEEESNQ 67

[Close]

BLAST of PI0025036 vs. NCBI nr
Match: KAA0039137.1 (hypothetical protein E6C27_scaffold121G00300 [Cucumis melo var. makuwa] >TYK26975.1 hypothetical protein E5676_scaffold322G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 6.3e-12
Identity = 43/62 (69.35%), Postives = 51/62 (82.26%), Query Frame = 0


Query: 1  MADNGGAPQGHLQELNEEIMQRLETLINVRLDKLEQRLQVRERPEVRGRVVGDHEEEEDS 60
          MA NGG PQG LQ  +E++MQRLETLINV+LD LEQR Q +ERPEVR +VVG+ + EEDS
Sbjct: 1  MAGNGGTPQGPLQGHSEKVMQRLETLINVKLDILEQRFQAKERPEVRRQVVGNLDVEEDS 60

Query: 61 EQ 63
          EQ
Sbjct: 61 EQ 62

[Close]

BLAST of PI0025036 vs. NCBI nr
Match: TYK04367.1 (hypothetical protein E5676_scaffold675G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 2.6e-05
Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 0


Query: 10 GHLQE-LNEEIMQRLETLINVRLDKLEQRLQVRERPEVRGRVVGDHEEEEDSEQ 63
          GH +E +N+EIMQ LE + N R+D+LEQRLQ +ERPEVR RVV + ++EE+S Q
Sbjct: 14 GHYRESINKEIMQCLEIINNARIDRLEQRLQAKERPEVRRRVVREPKQEEESNQ 67

The following BLAST results are available for this feature:

BLAST of PI0025036 vs.


Match Name	E-value	Identity	Description

BLAST of PI0025036 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TC25	3.1e-12	69.35	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BY01	1.2e-05	59.26	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0025036 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039137.1	6.3e-12	69.35	hypothetical protein E6C27_scaffold121G00300 [Cucumis melo var. makuwa] >TYK2697...	[more]
TYK04367.1	2.6e-05	59.26	hypothetical protein E5676_scaffold675G00400 [Cucumis melo var. makuwa]	[more]

BLAST of PI0025036 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0025036.1	PI0025036.1	mRNA