PI0024955 (gene) Melon (PI 482460) v1

Overview


Name	PI0024955
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr04: 18300948 .. 18302160 (-)
RNA-Seq Expression	PI0024955
Synteny	PI0024955

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAAAAAAAAAAAAAAAAAATCAGTAGCTTTCAATTTCATTTAACTCTCCACGTCAAGTTTAGCTTTGGTTCTTTCTCAGACAAATTAAATGTGCATCGAATTTCAAATCTTCTCTGCTTTTTTTCACTTTGCCTTTTTCTCCTTTTATCTCTCTATCTCTCTCTTTCATGGGTATTTGAACCTTCACCATTCTCTTCATAACCTTAATCTTTTTCCACAATTTGCATGGCCGCAACAACAATTTCAACATCACCAATTTCTCAATCTCTTAAACAATCTCATTCCCATCATCATCATCATCATCATCATCATCTCTTTCACCTAATTCCATCTCTAACTCTTCTCTTCCTCTTTCTCATAATTGCCATCCTCGGTAGCCCTTCCATGGCTGCCTTGGAGCCCCCGAAGTCGGAGTCGGAATCCAACGGCACACGGCGGGGAGATGATCGTCATTTTGAATCTGCCGTTTTACAGGTTCCGATCGGACTGAAATCTACTTCGAACAATTTGTTGCAGAAACAGAGGTTGGAATCCGAATCCAGCAGCAGACGGCGGAGAGACTATCGTCGTTTTGAATCTGACGGACCGAAACCAATTTCCAACATTCCGACGCAGAAACTGGTGTCGGAGTCGGAACCAAACGGCAGGCGGCGGAGAGGCTATCGTCAATTTGAATCTGCTGCGAGCAAAACGAAACCTAGTTCGAACAATCCGCCGGGGAAACAGAGATTGAAGTCGGAATCCAGCGGCAGGCGGTGGAGAGACTACCGTCGATTTGAATCCGCAGCTCTCAAAGTTCCAAACGACCAAACGATTCACGCTTCGAACAATCCGCCGCTGAAACAGAAGCCGAACACGGAGTCCGGCGGTAGGCGGCGGAGATATGACCGTCGATTTGAATCTGCGGCGCATGAAGTTCCGAGTGGGCCGAATCCGATTTCGAACTAACAAAAACAGAATTTCGTCAATGGGCGGTTTTGAGCGGAGATGTGGAAGTGTTTTTCTTCTGTAAATTAATTGCGAGCTGCAATGATTTTTTCATCTTCGCATGGATGCTAACTGATTGACAAGAACAACTGAATCCGCCATTGAAGCTTCTCCTAGACACTGCTCTCCATCTCCATTTTTAATCTTCCTTTTTCCTTTCTCCCCTGTTTTTGTGTGGTTTGTTATTTATATATATAAACATATAGACAGAGTTCATATTCGC

mRNA sequence

TAAAAAAAAAAAAAAAAAAAAATCAGTAGCTTTCAATTTCATTTAACTCTCCACGTCAAGTTTAGCTTTGGTTCTTTCTCAGACAAATTAAATGTGCATCGAATTTCAAATCTTCTCTGCTTTTTTTCACTTTGCCTTTTTCTCCTTTTATCTCTCTATCTCTCTCTTTCATGGGTATTTGAACCTTCACCATTCTCTTCATAACCTTAATCTTTTTCCACAATTTGCATGGCCGCAACAACAATTTCAACATCACCAATTTCTCAATCTCTTAAACAATCTCATTCCCATCATCATCATCATCATCATCATCATCTCTTTCACCTAATTCCATCTCTAACTCTTCTCTTCCTCTTTCTCATAATTGCCATCCTCGGTAGCCCTTCCATGGCTGCCTTGGAGCCCCCGAAGTCGGAGTCGGAATCCAACGGCACACGGCGGGGAGATGATCGTCATTTTGAATCTGCCGTTTTACAGGTTCCGATCGGACTGAAATCTACTTCGAACAATTTGTTGCAGAAACAGAGGTTGGAATCCGAATCCAGCAGCAGACGGCGGAGAGACTATCGTCGTTTTGAATCTGACGGACCGAAACCAATTTCCAACATTCCGACGCAGAAACTGGTGTCGGAGTCGGAACCAAACGGCAGGCGGCGGAGAGGCTATCGTCAATTTGAATCTGCTGCGAGCAAAACGAAACCTAGTTCGAACAATCCGCCGGGGAAACAGAGATTGAAGTCGGAATCCAGCGGCAGGCGGTGGAGAGACTACCGTCGATTTGAATCCGCAGCTCTCAAAGTTCCAAACGACCAAACGATTCACGCTTCGAACAATCCGCCGCTGAAACAGAAGCCGAACACGGAGTCCGGCGGTAGGCGGCGGAGATATGACCGTCGATTTGAATCTGCGGCGCATGAAGTTCCGAGTGGGCCGAATCCGATTTCGAACTAACAAAAACAGAATTTCGTCAATGGGCGGTTTTGAGCGGAGATGTGGAAGTGTTTTTCTTCTGTAAATTAATTGCGAGCTGCAATGATTTTTTCATCTTCGCATGGATGCTAACTGATTGACAAGAACAACTGAATCCGCCATTGAAGCTTCTCCTAGACACTGCTCTCCATCTCCATTTTTAATCTTCCTTTTTCCTTTCTCCCCTGTTTTTGTGTGGTTTGTTATTTATATATATAAACATATAGACAGAGTTCATATTCGC

Coding sequence (CDS)

ATGGCCGCAACAACAATTTCAACATCACCAATTTCTCAATCTCTTAAACAATCTCATTCCCATCATCATCATCATCATCATCATCATCTCTTTCACCTAATTCCATCTCTAACTCTTCTCTTCCTCTTTCTCATAATTGCCATCCTCGGTAGCCCTTCCATGGCTGCCTTGGAGCCCCCGAAGTCGGAGTCGGAATCCAACGGCACACGGCGGGGAGATGATCGTCATTTTGAATCTGCCGTTTTACAGGTTCCGATCGGACTGAAATCTACTTCGAACAATTTGTTGCAGAAACAGAGGTTGGAATCCGAATCCAGCAGCAGACGGCGGAGAGACTATCGTCGTTTTGAATCTGACGGACCGAAACCAATTTCCAACATTCCGACGCAGAAACTGGTGTCGGAGTCGGAACCAAACGGCAGGCGGCGGAGAGGCTATCGTCAATTTGAATCTGCTGCGAGCAAAACGAAACCTAGTTCGAACAATCCGCCGGGGAAACAGAGATTGAAGTCGGAATCCAGCGGCAGGCGGTGGAGAGACTACCGTCGATTTGAATCCGCAGCTCTCAAAGTTCCAAACGACCAAACGATTCACGCTTCGAACAATCCGCCGCTGAAACAGAAGCCGAACACGGAGTCCGGCGGTAGGCGGCGGAGATATGACCGTCGATTTGAATCTGCGGCGCATGAAGTTCCGAGTGGGCCGAATCCGATTTCGAACTAA

Protein sequence

MAATTISTSPISQSLKQSHSHHHHHHHHHLFHLIPSLTLLFLFLIIAILGSPSMAALEPPKSESESNGTRRGDDRHFESAVLQVPIGLKSTSNNLLQKQRLESESSSRRRRDYRRFESDGPKPISNIPTQKLVSESEPNGRRRRGYRQFESAASKTKPSSNNPPGKQRLKSESSGRRWRDYRRFESAALKVPNDQTIHASNNPPLKQKPNTESGGRRRRYDRRFESAAHEVPSGPNPISN

Homology

[Close]

BLAST of PI0024955 vs. ExPASy TrEMBL
Match: A0A5D3DC24 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G001030 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.6e-95
Identity = 200/240 (83.33%), Postives = 208/240 (86.67%), Query Frame = 0


Query: 1   MAATTISTSPISQSLKQSHSHHHHHHHHHLFHLIPSLTLLFLFLIIAILGSPSMAALEPP 60
           MAATTISTSPIS SLKQSHS HHH  HHHLFHL P LTLLFLFL IAILGSPSMAALEP 
Sbjct: 1   MAATTISTSPISLSLKQSHS-HHHRPHHHLFHLTPYLTLLFLFLTIAILGSPSMAALEPL 60

Query: 61  KSESESNGTRRGDDRHFESAVLQVPIGLKSTSNNLLQKQRLESESSSRRRRDYRRFESDG 120
           KS SES GTRR DDR FESAVLQVP G K TSNNLLQ+QRLESESS+RR  DYRRFESDG
Sbjct: 61  KSVSESTGTRRRDDRRFESAVLQVPSGPKPTSNNLLQEQRLESESSNRRWTDYRRFESDG 120

Query: 121 PKPISNIPTQKLVSESEPNGRRRRGYRQFESAASKTKPSSNNPPGKQRLKSESSGRRWRD 180
           PKPISN   QKLVSESE NGRR RGYR+FES AS TK SS NPP K+RL+SESSGRRWRD
Sbjct: 121 PKPISNSSMQKLVSESESNGRRWRGYRRFESVASGTKSSSKNPPRKKRLESESSGRRWRD 180

Query: 181 YRRFESAALKVPNDQTIHASNNPPLKQKPNTESGGRRRRYDRRFESAAHEVPSGPNPISN 240
           YRRFESAALKVPN++  HASNNPPLKQKPN+ESGG RRR DR FESAAHEVPSGPNPISN
Sbjct: 181 YRRFESAALKVPNNKKNHASNNPPLKQKPNSESGGWRRRNDRLFESAAHEVPSGPNPISN 239

[Close]

BLAST of PI0024955 vs. ExPASy TrEMBL
Match: A0A0A0LE33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G626150 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.4e-95
Identity = 199/240 (82.92%), Postives = 205/240 (85.42%), Query Frame = 0


Query: 1   MAATTISTSPISQSLKQSHSHHHHHHHHHLFHLIPSLTLLFLFLIIAILGSPSMAALEPP 60
           MAA TISTSPISQSLKQSH+    HH+HHLFHLIPSLTLLFLFL I ILGSPSMAALEP 
Sbjct: 1   MAAATISTSPISQSLKQSHT---QHHYHHLFHLIPSLTLLFLFLTITILGSPSMAALEPT 60

Query: 61  KSESESNGTRRGDDRHFESAVLQVPIGLKSTSNNLLQKQRLESESSSRRRRDYRRFESDG 120
            SESES GTRR DD  FESAVLQVP GLK TSNNLLQKQRL SES SR RRDYRRFESD 
Sbjct: 61  NSESESTGTRRRDDLRFESAVLQVPSGLKPTSNNLLQKQRLASESCSRLRRDYRRFESDE 120

Query: 121 PKPISNIPTQKLVSESEPNGRRRRGYRQFESAASKTKPSSNNPPGKQRLKSESSGRRWRD 180
            KPISNIP QKLVSESE NGRR RGYR+FESAAS TKPSSNNPP K+RLK ESSGRRWRD
Sbjct: 121 SKPISNIPMQKLVSESELNGRRWRGYRRFESAASGTKPSSNNPPRKKRLKLESSGRRWRD 180

Query: 181 YRRFESAALKVPNDQTIHASNNPPLKQKPNTESGGRRRRYDRRFESAAHEVPSGPNPISN 240
           YRRFESA LKVP  +  HASNNPPLKQKPN+ESG RRRR D  FESAAHEVPSGPNPISN
Sbjct: 181 YRRFESAVLKVPTGKRNHASNNPPLKQKPNSESGDRRRRNDHLFESAAHEVPSGPNPISN 237

[Close]

BLAST of PI0024955 vs. ExPASy TrEMBL
Match: A0A6J1EXF7 (uncharacterized protein LOC111437389 OS=Cucurbita moschata OX=3662 GN=LOC111437389 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.0e-14
Identity = 94/240 (39.17%), Postives = 110/240 (45.83%), Query Frame = 0


Query: 1   MAATTISTSPISQSLKQSHSHHHHHHHHHLFHLIPSLTLLFLFLIIAILGSPSMAALEPP 60
           MA  + S+SP S S +               +LIPSLTLLF+FL   +LGSPSMAA    
Sbjct: 1   MATASSSSSPNSSSSR---------------NLIPSLTLLFVFLTAVVLGSPSMAA---- 60

Query: 61  KSESESNGTRRGDDRHFESAVLQVPIGLKSTSNNLLQKQRLESESSSRRRRDYRRFESDG 120
            SES++                 +P  L    NN  +K RLESES  RR RD R  ES  
Sbjct: 61  -SESQTR---------------LIPHSL----NNPPRKHRLESESGGRRPRDDRPLES-- 120

Query: 121 PKPISNIPTQKLVSESEPNGRRRRGYRQFESAASKTKPSSNNPPGKQRLKSESSGRRWRD 180
                                       FE   S T    NNPP KQR  SES GR  R+
Sbjct: 121 --------------------------AVFE-VTSGTNHVLNNPPRKQRSDSESGGRGRRN 155

Query: 181 YRRFESAALKVPNDQTIHASNNPPLKQKPNTESGGRRRRYDRRFESAAHEVPSGPNPISN 240
            R                 SN+PP +Q  + +SGG+RR  D RFESAAHEVPSGPNPISN
Sbjct: 181 DR----------------DSNSPPRQQSLDKKSGGQRRD-DSRFESAAHEVPSGPNPISN 155

[Close]

BLAST of PI0024955 vs. NCBI nr
Match: KAA0068203.1 (hypothetical protein E6C27_scaffold238G001890 [Cucumis melo var. makuwa] >TYK21123.1 hypothetical protein E5676_scaffold392G001030 [Cucumis melo var. makuwa])

HSP 1 Score: 358.2 bits (918), Expect = 5.5e-95
Identity = 200/240 (83.33%), Postives = 208/240 (86.67%), Query Frame = 0


Query: 1   MAATTISTSPISQSLKQSHSHHHHHHHHHLFHLIPSLTLLFLFLIIAILGSPSMAALEPP 60
           MAATTISTSPIS SLKQSHS HHH  HHHLFHL P LTLLFLFL IAILGSPSMAALEP 
Sbjct: 1   MAATTISTSPISLSLKQSHS-HHHRPHHHLFHLTPYLTLLFLFLTIAILGSPSMAALEPL 60

Query: 61  KSESESNGTRRGDDRHFESAVLQVPIGLKSTSNNLLQKQRLESESSSRRRRDYRRFESDG 120
           KS SES GTRR DDR FESAVLQVP G K TSNNLLQ+QRLESESS+RR  DYRRFESDG
Sbjct: 61  KSVSESTGTRRRDDRRFESAVLQVPSGPKPTSNNLLQEQRLESESSNRRWTDYRRFESDG 120

Query: 121 PKPISNIPTQKLVSESEPNGRRRRGYRQFESAASKTKPSSNNPPGKQRLKSESSGRRWRD 180
           PKPISN   QKLVSESE NGRR RGYR+FES AS TK SS NPP K+RL+SESSGRRWRD
Sbjct: 121 PKPISNSSMQKLVSESESNGRRWRGYRRFESVASGTKSSSKNPPRKKRLESESSGRRWRD 180

Query: 181 YRRFESAALKVPNDQTIHASNNPPLKQKPNTESGGRRRRYDRRFESAAHEVPSGPNPISN 240
           YRRFESAALKVPN++  HASNNPPLKQKPN+ESGG RRR DR FESAAHEVPSGPNPISN
Sbjct: 181 YRRFESAALKVPNNKKNHASNNPPLKQKPNSESGGWRRRNDRLFESAAHEVPSGPNPISN 239

[Close]

BLAST of PI0024955 vs. NCBI nr
Match: KAE8650847.1 (hypothetical protein Csa_002136 [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 1.4e-69
Identity = 167/240 (69.58%), Postives = 171/240 (71.25%), Query Frame = 0


Query: 1   MAATTISTSPISQSLKQSHSHHHHHHHHHLFHLIPSLTLLFLFLIIAILGSPSMAALEPP 60
           MAA TISTSPISQSLKQSH+    HH+HHLFHLIPSLTLLFLFL I ILGSPSMAALEP 
Sbjct: 1   MAAATISTSPISQSLKQSHT---QHHYHHLFHLIPSLTLLFLFLTITILGSPSMAALEPT 60

Query: 61  KSESESNGTRRGDDRHFESAVLQVPIGLKSTSNNLLQKQRLESESSSRRRRDYRRFESDG 120
            SESES GTRR DD  FESAVLQVP GLK TSNNLLQKQRL SES SR RRDYRRFESD 
Sbjct: 61  NSESESTGTRRRDDLRFESAVLQVPSGLKPTSNNLLQKQRLASESCSRLRRDYRRFESDE 120

Query: 121 PKPISNIPTQKLVSESEPNGRRRRGYRQFESAASKTKPSSNNPPGKQRLKSESSGRRWRD 180
            KPISNIP QKLVSESE NGRR RGYR+FESAAS TKPSSNNPP K+RLK ESS      
Sbjct: 121 SKPISNIPMQKLVSESELNGRRWRGYRRFESAASGTKPSSNNPPRKKRLKLESS------ 180

Query: 181 YRRFESAALKVPNDQTIHASNNPPLKQKPNTESGGRRRRYDRRFESAAHEVPSGPNPISN 240
                                             GRRRR D  FESAAHEVPSGPNPISN
Sbjct: 181 ----------------------------------GRRRRNDHLFESAAHEVPSGPNPISN 197

[Close]

BLAST of PI0024955 vs. NCBI nr
Match: XP_022931103.1 (uncharacterized protein LOC111437389 [Cucurbita moschata])

HSP 1 Score: 90.5 bits (223), Expect = 2.1e-14
Identity = 94/240 (39.17%), Postives = 110/240 (45.83%), Query Frame = 0


Query: 1   MAATTISTSPISQSLKQSHSHHHHHHHHHLFHLIPSLTLLFLFLIIAILGSPSMAALEPP 60
           MA  + S+SP S S +               +LIPSLTLLF+FL   +LGSPSMAA    
Sbjct: 1   MATASSSSSPNSSSSR---------------NLIPSLTLLFVFLTAVVLGSPSMAA---- 60

Query: 61  KSESESNGTRRGDDRHFESAVLQVPIGLKSTSNNLLQKQRLESESSSRRRRDYRRFESDG 120
            SES++                 +P  L    NN  +K RLESES  RR RD R  ES  
Sbjct: 61  -SESQTR---------------LIPHSL----NNPPRKHRLESESGGRRPRDDRPLES-- 120

Query: 121 PKPISNIPTQKLVSESEPNGRRRRGYRQFESAASKTKPSSNNPPGKQRLKSESSGRRWRD 180
                                       FE   S T    NNPP KQR  SES GR  R+
Sbjct: 121 --------------------------AVFE-VTSGTNHVLNNPPRKQRSDSESGGRGRRN 155

Query: 181 YRRFESAALKVPNDQTIHASNNPPLKQKPNTESGGRRRRYDRRFESAAHEVPSGPNPISN 240
            R                 SN+PP +Q  + +SGG+RR  D RFESAAHEVPSGPNPISN
Sbjct: 181 DR----------------DSNSPPRQQSLDKKSGGQRRD-DSRFESAAHEVPSGPNPISN 155

The following BLAST results are available for this feature:

BLAST of PI0024955 vs.


Match Name	E-value	Identity	Description

BLAST of PI0024955 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DC24	2.6e-95	83.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LE33	3.4e-95	82.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G626150 PE=4 SV=1	[more]
A0A6J1EXF7	1.0e-14	39.17	uncharacterized protein LOC111437389 OS=Cucurbita moschata OX=3662 GN=LOC1114373...	[more]

BLAST of PI0024955 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0068203.1	5.5e-95	83.33	hypothetical protein E6C27_scaffold238G001890 [Cucumis melo var. makuwa] >TYK211...	[more]
KAE8650847.1	1.4e-69	69.58	hypothetical protein Csa_002136 [Cucumis sativus]	[more]
XP_022931103.1	2.1e-14	39.17	uncharacterized protein LOC111437389 [Cucurbita moschata]	[more]

BLAST of PI0024955 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024955.1	PI0024955.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane