PI0024910 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGTCTTCTAAATTTTAGGGTTTCTTCAGCACGCCTCTTTCTCCCTTTCGGATAGTTCGTTTCCTCTGTTGTGCTTGCGGTTTGTTCTCTCTCTGTAGTCTTAAGAATCATTTGCTCTTTTACTTCTTCAATTTGATTCGAATTTGTGTTCACTAATCTGATTCCAAAATTTAGGGTTGATTCACTTATCAAGATGCAGAACGAAGAGGGTAAAATCACAGAGCTTTATATTCCCAGAAAATGGTTCGTAATAGTATTATTTATCTAACTTTGATGATTCTGTCGCTAATTTTCATGTGGGTTGAACTTTTTCATGGGTTATTGTGTTGTTGATGCAGCTCCGCAACGAATCGGCTGATTACTTCCAAGGACCATGCTTCTGTTCAGATCAACATTGGGCATTTGGATGAGAATGGCATCTACAGTGGGCAATTTTCTACTTTTGCTCTCTGTGGTTTCATTCGGGCGCAGGTGATTGTCCTTCCCCTCTATTTTTCTCCTTGTTGTCAGTTTTTAATCTGTGATATATTTGAGCATTGACTTGGAACGGGGCATTTTATCTTTACTCTGTCTTGTTGCAAACAAAAAACTAATTTTCATGCTCTTTGTTGTGTTGAAAGTGTTGTTTAAGAGCGATGGATTGAACTTGGTTATGATTGAATCCGTCGGTATTGACTTTAGTTCTTCTAATAAAGGGAGTGCATTTGAGAATGACTTATTCTTCTTGACCATTTGATTATCTGCTAGCTGCTGGCTGTGTTTTTATATATAATAACAAACAGGTTTATTCAATCGTCTGTGATTCCTGTTGCCTGATATATTATGAAGCACCATTTTATGGACGGCTGTAGCTTGTAGTTAATTGAAACTAATCACGACTAAAAAAATGAAGAATATAATAAATTTAGAGTTGGACTAAATCATAGCCCTACAAAAGAAATCTTGAACATATCTAAACTACAATCTGTAGACATTAATCGAAAAGTACTAGATGAAAGCGAAAGAAAATGATAAGAAAGGGTAGAAGGTTGCATAAATGAGTCTCCAAAGGCCTTCTCCTCCTGCCTCTGCCCTCTTGCTTTCTCTTGAATGGTGGGAAAAGCCATTGTAGAATTATAATTAAAAGTTAAGACTAAATCATGGCCCTAGAAAAGAAATCTCAAATATAGCTAAACTACAGTCTGTAGACAATATAAAAATTCACTGATGGAAAATAAAAGAGAACGAGAAGAAAAGGTAGAAGCCTCAAAATTGAGTCTTGAAAGACCTTTGACATTTTGCTGTCTACTAGCTTCATCTTGAAGGGTGATAGAAGTCATTGTAGTGTAAGGAGTGGGAGTGTACAAAATTTTCATGTCCATAATCCATTATCTTGTTATTTCTTTCCTCATACTCTAGAATCTGGATTGAAACCGTACAAGATTTTCCTGTTCTTTTTAATATGGTGTTGATGCTGCCATGTAGCTGTCTAAAATCTTGCTGTATAGTTCAATCTCCATTCTTTGGAATCTGACCTGATGGGAGTGTTTGAGGCTTCTGTAGATATGATTTGATGTTTCCTATCATAGCTTGAACCATGTCTTTCGCTGTTGCTCGAATATTTCACCTACTTGACTGGGTTTTACATATTCCATTGCATTTTTCTGGCCTCATGGATGTTTGTCTTAATCCTCAACTTTCAAGTTCTCTACCTATGGTGATATTGATATACTCATGATGCTTTCTTTTATTCTTTGTAGGGAGATGCTGACAGTGCACTAGATCGTCTCTGGCAGAAGAAGAAAGTCGAAGTGCGTCAACAATAGATGATTGTGCCATTCTGGTTCATCTCTATATCAAAGTTTTCAAGTATAGAGATACACTTTTAAGATTTTTTGAACCACTCGTAGTTAAGTAGTTTCTTTTGACAATTTAAACTCATTAGTTTCTTTAAATGCAAACTCAACTTCATTGAGTCTGGACAAGCTCTGATGAGTCAAAAAGGACCAAAACTAAGTTGAATGAAATATGTTGAAGTTCATTTTCCATTAAAGATATTTTATCAGAGACTCTTTCAATCC TTGTCTTCTAAATTTTAGGGTTTCTTCAGCACGCCTCTTTCTCCCTTTCGGATAGTTCGTTTCCTCTGTTGTGCTTGCGGGTTGATTCACTTATCAAGATGCAGAACGAAGAGGGTAAAATCACAGAGCTTTATATTCCCAGAAAATGCTCCGCAACGAATCGGCTGATTACTTCCAAGGACCATGCTTCTGTTCAGATCAACATTGGGCATTTGGATGAGAATGGCATCTACAGTGGGCAATTTTCTACTTTTGCTCTCTGTGGTTTCATTCGGGCGCAGGGAGATGCTGACAGTGCACTAGATCGTCTCTGGCAGAAGAAGAAAGTCGAAGTGCGTCAACAATAGATGATTGTGCCATTCTGGTTCATCTCTATATCAAAGTTTTCAAGTATAGAGATACACTTTTAAGATTTTTTGAACCACTCGTAGTTAAGTAGTTTCTTTTGACAATTTAAACTCATTAGTTTCTTTAAATGCAAACTCAACTTCATTGAGTCTGGACAAGCTCTGATGAGTCAAAAAGGACCAAAACTAAGTTGAATGAAATATGTTGAAGTTCATTTTCCATTAAAGATATTTTATCAGAGACTCTTTCAATCC ATGCAGAACGAAGAGGGTAAAATCACAGAGCTTTATATTCCCAGAAAATGCTCCGCAACGAATCGGCTGATTACTTCCAAGGACCATGCTTCTGTTCAGATCAACATTGGGCATTTGGATGAGAATGGCATCTACAGTGGGCAATTTTCTACTTTTGCTCTCTGTGGTTTCATTCGGGCGCAGGGAGATGCTGACAGTGCACTAGATCGTCTCTGGCAGAAGAAGAAAGTCGAAGTGCGTCAACAATAG MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYSGQFSTFALCGFIRAQGDADSALDRLWQKKKVEVRQQ Homology
BLAST of PI0024910 vs. ExPASy Swiss-Prot
Match: Q3E902 (40S ribosomal protein S21-2 OS=Arabidopsis thaliana OX=3702 GN=RPS21C PE=1 SV=2) HSP 1 Score: 153.7 bits (387), Expect = 9.1e-37 Identity = 69/81 (85.19%), Postives = 78/81 (96.30%), Query Frame = 0
BLAST of PI0024910 vs. ExPASy Swiss-Prot
Match: Q9M337 (40S ribosomal protein S21-1 OS=Arabidopsis thaliana OX=3702 GN=RPS21B PE=1 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.3e-35 Identity = 66/82 (80.49%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of PI0024910 vs. ExPASy Swiss-Prot
Match: P35687 (40S ribosomal protein S21 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS21 PE=3 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 8.5e-35 Identity = 66/82 (80.49%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of PI0024910 vs. ExPASy Swiss-Prot
Match: Q41852 (40S ribosomal protein S21 OS=Zea mays OX=4577 GN=RPS21 PE=3 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 7.2e-34 Identity = 64/81 (79.01%), Postives = 74/81 (91.36%), Query Frame = 0
BLAST of PI0024910 vs. ExPASy Swiss-Prot
Match: Q9SMI2 (40S ribosomal protein S21 OS=Cyanophora paradoxa OX=2762 GN=RPS21 PE=3 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.0e-24 Identity = 50/75 (66.67%), Postives = 67/75 (89.33%), Query Frame = 0
BLAST of PI0024910 vs. ExPASy TrEMBL
Match: A0A1S4DSM1 (40S ribosomal protein S21 OS=Cucumis melo OX=3656 GN=LOC103483842 PE=3 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.7e-38 Identity = 81/82 (98.78%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of PI0024910 vs. ExPASy TrEMBL
Match: A0A5D3CXC9 (40S ribosomal protein S21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001000 PE=3 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.7e-38 Identity = 81/82 (98.78%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of PI0024910 vs. ExPASy TrEMBL
Match: A0A0A0L7W3 (40S ribosomal protein S21 OS=Cucumis sativus OX=3659 GN=Csa_3G154280 PE=3 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.7e-38 Identity = 81/82 (98.78%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of PI0024910 vs. ExPASy TrEMBL
Match: A0A6J1CCM4 (40S ribosomal protein S21 OS=Momordica charantia OX=3673 GN=LOC111009501 PE=3 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 3.9e-38 Identity = 80/82 (97.56%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of PI0024910 vs. ExPASy TrEMBL
Match: A0A6J1KDN2 (40S ribosomal protein S21 OS=Cucurbita maxima OX=3661 GN=LOC111494713 PE=3 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 5.0e-38 Identity = 79/82 (96.34%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of PI0024910 vs. NCBI nr
Match: XP_004134210.2 (40S ribosomal protein S21-2 [Cucumis sativus] >XP_008438883.1 PREDICTED: 40S ribosomal protein S21-2 [Cucumis melo] >XP_008458454.1 PREDICTED: 40S ribosomal protein S21-2 [Cucumis melo] >XP_016898984.1 PREDICTED: 40S ribosomal protein S21-2 [Cucumis melo] >XP_038879937.1 40S ribosomal protein S21-2 [Benincasa hispida] >XP_038906504.1 40S ribosomal protein S21-2 [Benincasa hispida] >XP_038906506.1 40S ribosomal protein S21-2 [Benincasa hispida] >KAA0049493.1 40S ribosomal protein S21-2 [Cucumis melo var. makuwa] >KGN57104.1 hypothetical protein Csa_010287 [Cucumis sativus] >TYK16172.1 40S ribosomal protein S21-2 [Cucumis melo var. makuwa]) HSP 1 Score: 167.9 bits (424), Expect = 3.6e-38 Identity = 81/82 (98.78%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of PI0024910 vs. NCBI nr
Match: XP_022138287.1 (40S ribosomal protein S21-2 [Momordica charantia] >XP_022138288.1 40S ribosomal protein S21-2 [Momordica charantia] >XP_022138289.1 40S ribosomal protein S21-2 [Momordica charantia]) HSP 1 Score: 166.8 bits (421), Expect = 8.0e-38 Identity = 80/82 (97.56%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of PI0024910 vs. NCBI nr
Match: XP_022930553.1 (40S ribosomal protein S21-2-like [Cucurbita moschata] >XP_023000447.1 40S ribosomal protein S21-2-like [Cucurbita maxima] >XP_023513574.1 40S ribosomal protein S21-2-like [Cucurbita pepo subsp. pepo] >KAG6593967.1 40S ribosomal protein S21-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026309.1 40S ribosomal protein S21-2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 166.4 bits (420), Expect = 1.0e-37 Identity = 79/82 (96.34%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of PI0024910 vs. NCBI nr
Match: XP_004143089.1 (40S ribosomal protein S21-2 [Cucumis sativus] >XP_038875675.1 40S ribosomal protein S21-2-like [Benincasa hispida] >KGN47181.1 hypothetical protein Csa_021003 [Cucumis sativus]) HSP 1 Score: 166.4 bits (420), Expect = 1.0e-37 Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 0
BLAST of PI0024910 vs. NCBI nr
Match: XP_022959410.1 (40S ribosomal protein S21-2 isoform X2 [Cucurbita moschata] >XP_023549096.1 40S ribosomal protein S21-2 [Cucurbita pepo subsp. pepo] >XP_023549097.1 40S ribosomal protein S21-2 [Cucurbita pepo subsp. pepo] >KAG7013636.1 40S ribosomal protein S21-2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 165.6 bits (418), Expect = 1.8e-37 Identity = 78/82 (95.12%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of PI0024910 vs. TAIR 10
Match: AT5G27700.1 (Ribosomal protein S21e ) HSP 1 Score: 153.7 bits (387), Expect = 6.5e-38 Identity = 69/81 (85.19%), Postives = 78/81 (96.30%), Query Frame = 0
BLAST of PI0024910 vs. TAIR 10
Match: AT3G53890.1 (Ribosomal protein S21e ) HSP 1 Score: 149.8 bits (377), Expect = 9.4e-37 Identity = 66/82 (80.49%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of PI0024910 vs. TAIR 10
Match: AT3G53890.2 (Ribosomal protein S21e ) HSP 1 Score: 149.8 bits (377), Expect = 9.4e-37 Identity = 66/82 (80.49%), Postives = 78/82 (95.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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