PI0024804 (gene) Melon (PI 482460) v1

Overview


Name	PI0024804
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr11: 14709699 .. 14714418 (+)
RNA-Seq Expression	PI0024804
Synteny	PI0024804

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGATGTTCTTAAAATTGAAGTCTTTGAAGAATGTTTGTATCTTCAAAAGAACTCGAGTCTTCAAGTGTGGTTTAGTCTTCGGGAGCTAGGAAGTCTTCTTGTTGTTGGGAAAATTCTCTCTAAGCTCTCTGGAGTAAAAATTTCTGAACCGCCAGAGATGAAAAGAACTCCTCTATTTATAGAATCATCTGGAGAGCTTTATGGGCTTTGGTTTGGTTAATCCATGGATTAGACTCATGGGCTCAACCACATGGATTCGGGTTATATTTAGCATTTGGGCTAAATTAACCTTATTTTTAGGCTCAATTGGATTTTAGCTCAAATAAATAATATTTAATTGGACAAAAATAATTAACTTGATCCAACGGTCATAATGAAAACATGTGGCGTCATTAGAATTGGCCAATTTATGTTTTTCAATTTTAATTTGGGACACCTGTCAACTTTTAATTAGTCCCAAATTCAATCATTTGTATTTTTTCGTCATTAATTTGATAAATGACATGACAGTTTGTGATTGGTATAAAATTTCTCGTTCAACAATGATATTTTTTTAGACAACTAACTTACAAAATGGAAAAGAAAAATAAATAAAAGTATGAGAGATTAGAAAAATGTTGGACTGGAGGAATTAATAAAATGATGGTTTTTTTTAGTAAAATTAAGTTATTTTTTATGTGTACTATTTATTTTTCTCTCAATTCTATTTATATTTCACATTAATTTTGAGTAATTTAGTACATGAGTCCGTTTTCTTTTTTTGGTTATTCAATGGATTTCAAAAAATTAAAACATTTGTATATTATTCATATATTTGCATTGGAGTTTTTCTTCAAACAATTGAATAATATTTTAAAAGGTAAATTGCAAGAACTACCCCTAAAGTACGGTAATAGTTGCAATTACACTTTCAAACTTTCGATAATAACAATTGAACCTCTGAACTTCTAAAAATGTTAAAATTGGACCCTCGAGTTTTCGATAATTGTAAAAATTGAACCCACCAATAATAAAATTTGGATAACCAAATTTATATAATCAACACAATTTATACAATTATGTAAGTTTGAGGGTCTATTTTTTAAAATTTGAATAAGTTCGAGGGCTCAATTTTTAATTTTAAAAGTTTAAGAGTATAATCCAACTACCACCATACTCTAGGGGTGTTTTTTGCAATTTTCCTATTTTAAAACTTTAAATTAAAACTTTAAATCCTTTTGTCTTCATTATTAATTATTTTCAAAGAAGTGTAAATAATGACATTATTAAATTATAAATTTAGTTTTCCAACTTTTTAAAATGTGTTTGATGAACACATATGAGACATTTTCAAATATAGCAAAAAGTTGAAACTAGTTACAAATATAGCCAAATTTATCAAATTCTCTATAATTTTTTTTTTTTGTTATATTTGAAAATAGTTTCAATTTTGTAGCTATAAATTTTAAGAAGTATATAATAAGTCAATAAATCTTACAAATTCTTGTTTAATATATAATTAAAATTAAGAAGAAGTTTAGTAGGTCAATAAATTAATTATATACAAAGTTAAGGTCCTTAAAACTATTAAACCCAAAATTAAAAGTTTAGTGACTTGTCATATAAGTTTCTACATCTATTAAAGGGGTCTTTTAAAAAAATATAACAAACTGTTAAAATATTTACACTATATAGAACAATTTTGGAAATGAAAAAAGTTCACAAACCCACAATGTGAAATATCAAAAGTACCCAGTCAACACGCGATTAATCGACCACACGCTTATGAGTAATCTTCTTCTAAACGATCATGATACACGATCGTGTAGTTCATTTTAAACGATCGTTCAGATCTTCGTAAATGATCGTTTGAATCTGTCACTTATCTATCTGAGATAGACAGTGATAGTGTTCTATCTCTATCTATCTAGGATAGACGACTGATCTTGTACCAATATCTAAACGATTTTGGTACATGATCTCGTACCAAATCTAAATGGTTTTGATACACGATCGTTTAGATTTTGGTAAACCATCTTGTATCAAATCTAAACGATCTTATGCCAAATCTAAACGACATTATACCAAATCTAAACAACATTGTACTAAAGCTAAACGATCTAAATGATCTTGGTACATGATCTTGTACAAGATGTTTAGATGTTGGTACACGATTGTTTAGATGTTGGTATACGATCATTTAGATTTTGGTAAACGATCTTGTACCAAGTCTAAACAATCTTATACCAAATCTAAACGACATTGTGCCAAATCTAAACGGCATTGTACCAAAGCTAAACGATCTAAATGGTCTCGATACACAATCTTGTAAAAGATTGTTTAGATGTTGGTACACGATCGCTTAGATTTTGGTAAACGATCTTATACCAAATCTAAATGACATTGTGCCAAATCTAAACGACATTGTGCCAAATCTAAACGATCTTGTACCAAATCTAAATGATCTTGCTACACGATCTTGTACCAAGATTATGTTTAGATATTGGTACACGATCGTTCAGATCTTGGTAAACAAGATCTTAGTAAACAAGATCTTGGTAAACAATCGTTTAAATCTATCACTTATGTATGTAGGATAGATAGTGATCTATCTCTATCTATCTCAGATAAATGACTAATCCTTTAGATTTTTGGTACACGAGCATGTAGTGAAATAAGAAGAAAAAAAGAAGATGAGAGACGATGAAGAAGGAAGCAGAGTATTAACTTGATTGGTCGAAAATCTGAAAAAGGAAATGAATACATTGCAAACAAAATGAATAAATCGCAAAGAAGAAAAAGAATAAATGAAGAAGATGAAAATCTGAAAGAGGAGATGAATAATTCACAAACAGAATGAATAAATAACAAAGAAGAAGAAGAATAAGTGAAGAAGATGATTAATAAATCGCAAGGGCATATATGGAATTTATGAAAATATATTTAAGCTTCATGAGCTTTTCTTATTTTGTTATACGGGCTGTAAATATTTAGGCATTTTGTTACATTTATGTAAATTTCCCTTTATTAAACGTAATAACAAAAGCTTTAGAGACTGTATATATTTTAATTATATATCATTCAATACTCACTCTCACTTATGGGCTCAAAATTTGAAGAATTTCCCTAATAAGTGAAAATCAATATTAAATTAGGGAGTAAATAACGTTGCAGTGGCATGAAGACAGGACATCCTGAACCACACTGCTCTAGGGTCAATTGGCGATTTAAGATGGTACCAGAGCAGTGTGGTTCAGGATGTCCCATCTTCAATCCCTTACAATGTTATTTCCTCCCTAACCCACAAATGAAGTTGGTTGTTAGATGATGTATAATTAAATTCGCCTTCACTCATCAACTTAAGCTTTTGGATCGATTAATGATTTACGAACTTATATTCGAATCCATAAAGACCCTAAATTTCTAGAAGTAACAATTTAGCCCCTAAACTTTTTAGTCCATATTCTTTTAATTTTTGTAACAATTTAGTTCGTAAGCTTTACTATGTAACAATTTAAAATATGTATCAATTTAATCACTATTGTAAAAGTTAGTATTGACATTGAATCAAATTCTTTGCATAAATTAAACAATAAAGTAATTAGAGATTTAATATTTGTACAAAATACAGAATCTACGTCGTAAATTAATAACTAAATCTAATTTTTGATAATTTTTAGTTTTACTAGGAGATGTATGATATCCAAGTTGAGTTGAGTGGGTAAAAGGGTTACAACCTTGTTATACACTTAACTCACATTTTTTATGTCCATTCACTCAATTACTTTTTTATATAATAATTACCCATTCAACTCAACTTTCCAAAAAAATTCAAACCAAAACTCCTAAATTACTATAAACAAAGTTAGAGACTAAACTGATATTTTGAGAAAATTTTAGAAATAAAAATGATTTTTATAAAATAAAAAAAAAAAAAAAAGAAAAGAGAAGAGAGGGGGGAGGGAATTAAAAGGGTTCACGCGGAGGAAGGTGTGGATGTTGGTAAGCCACCCCGTTCGCCAGCTGGCTGTCGGAGAGAGGCGTCCCGGAGAAAAAATTCAGAACCCAAACCCTTACCCCCTTCTTTACCTTTCTTCTTCCTTCTTCCATTTCCATTTTCATTGCACGTGATTCTCAAACTCACTCCATCGCTTTCTATCAAATCAAATCCTCATCTTCTTCAAGATTCATTCTCAATTCCCTCCGATCCCCCTTCCCCCATTCTTCCCCTACTTTACTACTCTCCTCATTCTTCCTCCCTTTTCATACTTCTTCAGGTCTGTAATTTCTCTTTATTTCCTTTCTTTTCCGCATTTTCTCAAATGGGTTTTTCTTTTCCTCTGGGTTATCGCTGTTTTTTGTATATGGGATGTCATATTTTGATCTTGATTATGATAATGATGGTGATGATTTAGCTTTTATTGTATTTGTGGGTCTTGTTTTTTGTTTTGTTTACTGGGGTCTCTGATTTCTGCTTTGTTTCCTTGTGTAAACATGGCCTTGTTAATGCCCTTTCTTTCGTTTTTTTTTTTTTTTTTTTTTCGCTTTTTGTTTGTTCTCAATATTAGTGCTTATGCCCAATCATTTTGACGTTCCTGTTTCTCGGGTATTATGCCATCCAGCTTGAAGATATTGGGGAAACCTTAAAAGGGTTTTTTCAGTGGTTTTTGTTGACTGAGGAGTATGTAAGTTCGATTGGACCTTATATGGGGGTAGAAATAGAAACTACTTGGTGA

mRNA sequence

ATGCTTGATGTTCTTAAAATTGAAGTCTTTGAAGAATGTTTGTATCTTCAAAAGAACTCGAGTCTTCAAGTGTGGTTTAGTCTTCGGGAGCTAGGAAGTCTTCTTGTTGTTGGGAAAATTCTCTCTAAGCTCTCTGGAGTAAAAATTTCTGAACCGCCAGAGATGAAAAGAACTCCTCTATTTATAGAATCATCTGGAGAGCTTTATGGGCTTTGGGTTCACGCGGAGGAAGGTGTGGATGTTGGTAAGCCACCCCGTTCGCCAGCTGGCTGTCGGAGAGAGGCGTCCCGGAGAAAAAATTCAGAACCCAAACCCTTACCCCCTTCTTTACCTTTCTTCTTCCTTCTTCCATTTCCATTTTCATTGCACGTGATTCTCAAACTCACTCCATCGCTTTCTATCAAATCAAATCCTCATCTTCTTCAAGATTCATTCTCAATTCCCTCCGATCCCCCTTCCCCCATTCTTCCCCTACTTTACTACTCTCCTCATTCTTCCTCCCTTTTCATACTTCTTCAGCTTGAAGATATTGGGGAAACCTTAAAAGGGTTTTTTCAGTGGTTTTTGTTGACTGAGGAGTATGTAAGTTCGATTGGACCTTATATGGGGGTAGAAATAGAAACTACTTGGTGA

Coding sequence (CDS)

ATGCTTGATGTTCTTAAAATTGAAGTCTTTGAAGAATGTTTGTATCTTCAAAAGAACTCGAGTCTTCAAGTGTGGTTTAGTCTTCGGGAGCTAGGAAGTCTTCTTGTTGTTGGGAAAATTCTCTCTAAGCTCTCTGGAGTAAAAATTTCTGAACCGCCAGAGATGAAAAGAACTCCTCTATTTATAGAATCATCTGGAGAGCTTTATGGGCTTTGGGTTCACGCGGAGGAAGGTGTGGATGTTGGTAAGCCACCCCGTTCGCCAGCTGGCTGTCGGAGAGAGGCGTCCCGGAGAAAAAATTCAGAACCCAAACCCTTACCCCCTTCTTTACCTTTCTTCTTCCTTCTTCCATTTCCATTTTCATTGCACGTGATTCTCAAACTCACTCCATCGCTTTCTATCAAATCAAATCCTCATCTTCTTCAAGATTCATTCTCAATTCCCTCCGATCCCCCTTCCCCCATTCTTCCCCTACTTTACTACTCTCCTCATTCTTCCTCCCTTTTCATACTTCTTCAGCTTGAAGATATTGGGGAAACCTTAAAAGGGTTTTTTCAGTGGTTTTTGTTGACTGAGGAGTATGTAAGTTCGATTGGACCTTATATGGGGGTAGAAATAGAAACTACTTGGTGA

Protein sequence

MLDVLKIEVFEECLYLQKNSSLQVWFSLRELGSLLVVGKILSKLSGVKISEPPEMKRTPLFIESSGELYGLWVHAEEGVDVGKPPRSPAGCRREASRRKNSEPKPLPPSLPFFFLLPFPFSLHVILKLTPSLSIKSNPHLLQDSFSIPSDPPSPILPLLYYSPHSSSLFILLQLEDIGETLKGFFQWFLLTEEYVSSIGPYMGVEIETTW

Homology

[Close]

BLAST of PI0024804 vs. ExPASy TrEMBL
Match: A0A0A0KGT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G154520 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 5.3e-07
Identity = 54/104 (51.92%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 86  RSPAGCRREASRRKNSEPKP-----LPPS---LPFFFLL--PFPFSLHVILKLTPSLSIK 145
           R  AGCRREASRRKNSEPKP     L  S   L  FFLL  PFPF LHVIL LTPSLSIK
Sbjct: 5   RVEAGCRREASRRKNSEPKPFFTFLLSSSFFLLSSFFLLPFPFPFPLHVILNLTPSLSIK 64

Query: 146 ----SNPHLLQDSFSIPSDPPSPILPL-LYYSP-HSSSLFILLQ 174
               S+   + +S   P    SP L L  ++ P H+SS   +L+
Sbjct: 65  SKSSSSSRFILNSLRSPFPHYSPTLLLSSFFLPFHTSSALKILR 108

[Close]

BLAST of PI0024804 vs. ExPASy TrEMBL
Match: A0A5A7UIX7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G001700 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.9e-04
Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0


Query: 4   VLKIEVFEECLYLQKNSSLQVW---FSLRELGSLLVVGKILSKLSGVKISEPPEMKRTPL 63
           VLK+ VFEE LYL ++ +L+ +   +S   +   L +G+I S+ SGVK  +P +MKRTPL
Sbjct: 50  VLKVGVFEESLYLGRSFNLRGYLRGWSTSGVEETLFLGRIPSRPSGVKNFQPLQMKRTPL 109

Query: 64  FIESSGELYGL 72
           FIE  G  +GL
Sbjct: 110 FIEFPGGFHGL 120

[Close]

BLAST of PI0024804 vs. ExPASy TrEMBL
Match: A0A5D3CXT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G00830 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.9e-04
Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0


Query: 4   VLKIEVFEECLYLQKNSSLQVW---FSLRELGSLLVVGKILSKLSGVKISEPPEMKRTPL 63
           VLK+ VFEE LYL ++ +L+ +   +S   +   L +G+I S+ SGVK  +P +MKRTPL
Sbjct: 48  VLKVGVFEESLYLGRSFNLRGYLRGWSTSGVEETLFLGRIPSRPSGVKNFQPLQMKRTPL 107

Query: 64  FIESSGELYGL 72
           FIE  G  +GL
Sbjct: 108 FIEFPGGFHGL 118

[Close]

BLAST of PI0024804 vs. NCBI nr
Match: KGN46971.1 (hypothetical protein Csa_020823 [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-06
Identity = 54/104 (51.92%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 86  RSPAGCRREASRRKNSEPKP-----LPPS---LPFFFLL--PFPFSLHVILKLTPSLSIK 145
           R  AGCRREASRRKNSEPKP     L  S   L  FFLL  PFPF LHVIL LTPSLSIK
Sbjct: 5   RVEAGCRREASRRKNSEPKPFFTFLLSSSFFLLSSFFLLPFPFPFPLHVILNLTPSLSIK 64

Query: 146 ----SNPHLLQDSFSIPSDPPSPILPL-LYYSP-HSSSLFILLQ 174
               S+   + +S   P    SP L L  ++ P H+SS   +L+
Sbjct: 65  SKSSSSSRFILNSLRSPFPHYSPTLLLSSFFLPFHTSSALKILR 108

[Close]

BLAST of PI0024804 vs. NCBI nr
Match: TYK15039.1 (hypothetical protein E5676_scaffold45G00830 [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 3.9e-04
Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0


Query: 4   VLKIEVFEECLYLQKNSSLQVW---FSLRELGSLLVVGKILSKLSGVKISEPPEMKRTPL 63
           VLK+ VFEE LYL ++ +L+ +   +S   +   L +G+I S+ SGVK  +P +MKRTPL
Sbjct: 48  VLKVGVFEESLYLGRSFNLRGYLRGWSTSGVEETLFLGRIPSRPSGVKNFQPLQMKRTPL 107

Query: 64  FIESSGELYGL 72
           FIE  G  +GL
Sbjct: 108 FIEFPGGFHGL 118

[Close]

BLAST of PI0024804 vs. NCBI nr
Match: KAA0054226.1 (hypothetical protein E6C27_scaffold131G001700 [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 3.9e-04
Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0


Query: 4   VLKIEVFEECLYLQKNSSLQVW---FSLRELGSLLVVGKILSKLSGVKISEPPEMKRTPL 63
           VLK+ VFEE LYL ++ +L+ +   +S   +   L +G+I S+ SGVK  +P +MKRTPL
Sbjct: 50  VLKVGVFEESLYLGRSFNLRGYLRGWSTSGVEETLFLGRIPSRPSGVKNFQPLQMKRTPL 109

Query: 64  FIESSGELYGL 72
           FIE  G  +GL
Sbjct: 110 FIEFPGGFHGL 120

The following BLAST results are available for this feature:

BLAST of PI0024804 vs.


Match Name	E-value	Identity	Description

BLAST of PI0024804 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGT6	5.3e-07	51.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G154520 PE=4 SV=1	[more]
A0A5A7UIX7	1.9e-04	46.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CXT9	1.9e-04	46.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0024804 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46971.1	1.1e-06	51.92	hypothetical protein Csa_020823 [Cucumis sativus]	[more]
TYK15039.1	3.9e-04	46.48	hypothetical protein E5676_scaffold45G00830 [Cucumis melo var. makuwa]	[more]
KAA0054226.1	3.9e-04	46.48	hypothetical protein E6C27_scaffold131G001700 [Cucumis melo var. makuwa]	[more]

BLAST of PI0024804 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024804.1	PI0024804.1	mRNA