PI0024737 (gene) Melon (PI 482460) v1

Overview


Name	PI0024737
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon gag protein
Location	chr03: 17688757 .. 17690228 (+)
RNA-Seq Expression	PI0024737
Synteny	PI0024737

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTAATATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATCTGTTAAAGTTGCAAAGTGCGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTGCCCTAACTTAGTAGAAGAGGCAGATGTCATTAGGAAGTACGATCCTCATAGCAACACTTACAACGCCGGTTGGAGAGACAACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGGTCTTGCTACTAATACTATCTCTTTTCAGAATGAAATGAAACAACAAATGTCTCATCTAACCAATGCCATAAGTAAATTAGAAGGTAAAGGCAAACTTCCGGGTCAGCCTGATCATGCCAACGTAAGTGCCATCTCACTTAGAAGCGGTAAGATTCTGGAAACCCCTTCAAGTAAAGAAAAGGTAACTTCTACCCCTATCATTCTAGAAAATAAAGATGAGAAAAAGGAAGAAAAATTAGAAACTAGTTCTTTACCATCATCTTCTTCAAAAGGTAAATCTCATGTTCTTGATTATTCTCCATATGTTCCTAAAGCTCCTTTTCCTTCCAGGTTAGCTCCTAAGAAGAAAGAGTCGCCCAAGGAAGAAGAACTTCTAGAGATGTTCAGAAAGGTGCAAATAAATCTACCTCTACTTGATGCAATCCAACAAGTCCCAAGGTATGCGAAATTTCTCAAAGAGTTATGCACCAACAAGAGAAAAATCAAAGAAAAGTCGATGGTAAGTCATAACATTTCTGCACTTCTTAAGAATTCAATTCCTGAGAAACAAAATGATCCATGTATGTTTTCTCTTCCTTGTATTATAGGCAATAGGCCAATTTCCCATGCAATGCTTGACCTAGGAGCCTCTATTAATGGCATGCCTTATTTTGTGTTTAAAGATCTAGAATTGAATAACTTGCAAAAAACAAGTGTATGCATACAATTAGCTGATAGATTTTTTATTTCACCGCTAGGAATAGTTGAAGATGTACTTGTTAAAGTAGATAAACTAATCTTTCCTGCGGATTTCTATATTTTAGAAATGAATGATTCATGTGCAAAGCCTTCCCATTCAATTCTATTAGGAAGACCTTTCCTTAAGACTGCTAAAGCAATAATTGATGTAGATAAAGGTTGCCTAAGTGTAGAATTTGATGGAGACGTTGTGATATTTAATATTTTTGAATCCATGAAATATCCTGAAGAATGTTTATCTTTATGCTCCTTAGAATTGCATGAAGAATTTGATGAATTGCCTATTAATAATGAATTTGCTAAACAAGAGTTAGATGAAATTGATGATGATATTTGTTTGCATGAATTTGGTGATGAAAAAGAGATGGTAGAAGTAGAAATGGATGAAAAATTAAATCTTGATGGAATAAATTCTAACATTTTTTTCTTTTCTCCCCAGGAACAAGGAATTGA

mRNA sequence

ATGCTTAATATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATCTGTTAAAGTTGCAAAGTGCGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTGCCCTAACTTAGTAGAAGAGGCAGATGTCATTAGGAAGTACGATCCTCATAGCAACACTTACAACGCCGGTTGGAGAGACAACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGGTCTTGCTACTAATACTATCTCTTTTCAGAATGAAATGAAACAACAAATGTCTCATCTAACCAATGCCATAAGTAAATTAGAAGGTAAAGGCAAACTTCCGGGTCAGCCTGATCATGCCAACGTAAGTGCCATCTCACTTAGAAGCGGTAAGATTCTGGAAACCCCTTCAAGTAAAGAAAAGGTAACTTCTACCCCTATCATTCTAGAAAATAAAGATGAGAAAAAGGAAGAAAAATTAGAAACTAGTTCTTTACCATCATCTTCTTCAAAAGAATTGCATGAAGAATTTGATGAATTGCCTATTAATAATGAATTTGCTAAACAAGAGTTAGATGAAATTGATGATGATATTTGTTTGCATGAATTTGGAACAAGGAATTGA

Coding sequence (CDS)

ATGCTTAATATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATCTGTTAAAGTTGCAAAGTGCGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTGCCCTAACTTAGTAGAAGAGGCAGATGTCATTAGGAAGTACGATCCTCATAGCAACACTTACAACGCCGGTTGGAGAGACAACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGGTCTTGCTACTAATACTATCTCTTTTCAGAATGAAATGAAACAACAAATGTCTCATCTAACCAATGCCATAAGTAAATTAGAAGGTAAAGGCAAACTTCCGGGTCAGCCTGATCATGCCAACGTAAGTGCCATCTCACTTAGAAGCGGTAAGATTCTGGAAACCCCTTCAAGTAAAGAAAAGGTAACTTCTACCCCTATCATTCTAGAAAATAAAGATGAGAAAAAGGAAGAAAAATTAGAAACTAGTTCTTTACCATCATCTTCTTCAAAAGAATTGCATGAAGAATTTGATGAATTGCCTATTAATAATGAATTTGCTAAACAAGAGTTAGATGAAATTGATGATGATATTTGTTTGCATGAATTTGGAACAAGGAATTGA

Protein sequence

MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPNLVEEADVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKGLATNTISFQNEMKQQMSHLTNAISKLEGKGKLPGQPDHANVSAISLRSGKILETPSSKEKVTSTPIILENKDEKKEEKLETSSLPSSSSKELHEEFDELPINNEFAKQELDEIDDDICLHEFGTRN

Homology

[Close]

BLAST of PI0024737 vs. ExPASy TrEMBL
Match: A0A5A7VQ60 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1704G00030 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.6e-67
Identity = 136/199 (68.34%), Postives = 168/199 (84.42%), Query Frame = 0


Query: 1   MLNM-TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPNLVEEADVIRKYDPHSNTYNAGW 60
           MLNM TTLLTSFVQG  +KV KCGVCGLVGH N+KCP ++E+ +++R+YDPHSNTYN+GW
Sbjct: 204 MLNMTTTLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGW 263

Query: 61  RDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKGLATNTISFQNEMKQQMSHLTNAISK 120
           RDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++K LATNT+SFQ EMKQQM+ LT AISK
Sbjct: 264 RDNPNLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISK 323

Query: 121 LEGKGKLPGQPDHANVSAISLRSGKILETPSSKE-KVTSTPIILENKDEKKEEKLETSSL 180
           ++GKGKLP Q DHANVSAISLRSGKIL+TP++KE KVTS P+ L +K+E KEEK+ET+  
Sbjct: 324 MDGKGKLPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPS 383

Query: 181 PSSSSKELHEEFDELPINN 198
           PS+S        D+ P+N+
Sbjct: 384 PSNSKN------DKSPLND 396

[Close]

BLAST of PI0024737 vs. ExPASy TrEMBL
Match: A0A5D3CRR8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00610 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 4.8e-67
Identity = 132/198 (66.67%), Postives = 164/198 (82.83%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPNLVEEADVIRKYDPHSNTYNAGWR 60
           MLNMTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP ++E+ +++RKYDPH NTYN+GWR
Sbjct: 139 MLNMTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWR 198

Query: 61  DNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKGLATNTISFQNEMKQQMSHLTNAISKL 120
           DNPNLRWGNDNQ+ +QA S+S+NQGTNLED++K LATNT+SFQ EMKQQM+ LT AISK+
Sbjct: 199 DNPNLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKM 258

Query: 121 EGKGKLPGQPDHANVSAISLRSGKILETPSSKE-KVTSTPIILENKDEKKEEKLETSSLP 180
           +GKGKL  Q ++ANVSA+SLRSGKIL+TP++KE K TS P+ L  K+E KEEK+ET+  P
Sbjct: 259 DGKGKLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSP 318

Query: 181 SSSSKELHEEFDELPINN 198
            +S        D+ P+N+
Sbjct: 319 YNSKN------DKFPLND 330

[Close]

BLAST of PI0024737 vs. ExPASy TrEMBL
Match: E5GBZ4 (Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 4.8e-67
Identity = 133/195 (68.21%), Postives = 163/195 (83.59%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPNLVEEADVIRKYDPHSNTYNAGWR 60
           MLNMTTLLTSFVQG  +KV KCGVC LVGHPNDKCP ++E+ +++RKYDP+ NTYN+GWR
Sbjct: 54  MLNMTTLLTSFVQGTPLKVTKCGVCRLVGHPNDKCPEVIEDVNIVRKYDPYGNTYNSGWR 113

Query: 61  DNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKGLATNTISFQNEMKQQMSHLTNAISKL 120
           DNPNLRWGNDNQ+ +QA  +S+NQGTNLED++K LATNT+SFQ EMKQQM+ LT AISK+
Sbjct: 114 DNPNLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKM 173

Query: 121 EGKGKLPGQPDHANVSAISLRSGKILETPSSKE-KVTSTPIILENKDEKKEEKLETSSLP 180
           +GKGKLP QPD+ANVSAISLRSGKIL+TP++KE KVTS  + L +K+E KEEK+ET+  P
Sbjct: 174 DGKGKLPAQPDYANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSP 233

Query: 181 SSSSKELHEEFDELP 195
           S+S  +     D  P
Sbjct: 234 SNSKNDKSPRNDFTP 248

[Close]

BLAST of PI0024737 vs. ExPASy TrEMBL
Match: A0A5D3CB46 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold544G00170 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 6.2e-67
Identity = 128/176 (72.73%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPNLVEEADVIRKYDPHSNTYNAGWR 60
           MLNMTTLLTSFVQG   KV KCGVCGLVGHPNDKCP ++E+ +++R+YDPHSNTYN+GWR
Sbjct: 103 MLNMTTLLTSFVQGTPPKVTKCGVCGLVGHPNDKCPKVIEDVNIVRRYDPHSNTYNSGWR 162

Query: 61  DNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKGLATNTISFQNEMKQQMSHLTNAISKL 120
           DN NLRWGNDNQ+ +QA S+S+NQGTNLED++K LATNT+SFQ +MKQQM+ LT AISK+
Sbjct: 163 DNLNLRWGNDNQKYTQAPSTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTAISKM 222

Query: 121 EGKGKLPGQPDHANVSAISLRSGKILETPSSKE-KVTSTPIILENKDEKKEEKLET 176
           +GKGKLP QPDHANVSAISLRSGKIL+TP++KE K+TS P+ L +K+E KEEK+++
Sbjct: 223 DGKGKLPAQPDHANVSAISLRSGKILDTPTTKEKKLTSKPLPLNSKNESKEEKVDS 278

[Close]

BLAST of PI0024737 vs. ExPASy TrEMBL
Match: A0A1S3CQU8 (uncharacterized protein LOC103503291 OS=Cucumis melo OX=3656 GN=LOC103503291 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.8e-66
Identity = 133/198 (67.17%), Postives = 167/198 (84.34%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPNLVEEADVIRKYDPHSNTYNAGWR 60
           MLNMTTLLTSFVQG ++KV KCGVCGLVG+PNDKCP ++E+ +++R+YDPH NTYN GWR
Sbjct: 53  MLNMTTLLTSFVQGTALKVTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPHGNTYNLGWR 112

Query: 61  DNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKGLATNTISFQNEMKQQMSHLTNAISKL 120
           DNPNLRWGNDNQ+ +QA  +S+NQGTNLED++K LATNT+SFQ +MKQQM+ LT  ISK+
Sbjct: 113 DNPNLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTVISKM 172

Query: 121 EGKGKLPGQPDHANVSAISLRSGKILETPSSKE-KVTSTPIILENKDEKKEEKLETSSLP 180
           +GKGKLP QPDH NVSAISLRSGKIL+TP++KE KVTS  + L +K++ KEEK+ET+S  
Sbjct: 173 DGKGKLPAQPDHVNVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNQSKEEKVETNS-S 232

Query: 181 SSSSKELHEEFDELPINN 198
           SS+SK      D+ P+N+
Sbjct: 233 SSNSKN-----DKSPLND 244

[Close]

BLAST of PI0024737 vs. NCBI nr
Match: KAA0067359.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 265.8 bits (678), Expect = 3.4e-67
Identity = 136/199 (68.34%), Postives = 168/199 (84.42%), Query Frame = 0


Query: 1   MLNM-TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPNLVEEADVIRKYDPHSNTYNAGW 60
           MLNM TTLLTSFVQG  +KV KCGVCGLVGH N+KCP ++E+ +++R+YDPHSNTYN+GW
Sbjct: 204 MLNMTTTLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGW 263

Query: 61  RDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKGLATNTISFQNEMKQQMSHLTNAISK 120
           RDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++K LATNT+SFQ EMKQQM+ LT AISK
Sbjct: 264 RDNPNLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISK 323

Query: 121 LEGKGKLPGQPDHANVSAISLRSGKILETPSSKE-KVTSTPIILENKDEKKEEKLETSSL 180
           ++GKGKLP Q DHANVSAISLRSGKIL+TP++KE KVTS P+ L +K+E KEEK+ET+  
Sbjct: 324 MDGKGKLPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPS 383

Query: 181 PSSSSKELHEEFDELPINN 198
           PS+S        D+ P+N+
Sbjct: 384 PSNSKN------DKSPLND 396

[Close]

BLAST of PI0024737 vs. NCBI nr
Match: ADN33993.1 (retrotransposon gag protein [Cucumis melo subsp. melo])

HSP 1 Score: 264.2 bits (674), Expect = 9.8e-67
Identity = 133/195 (68.21%), Postives = 163/195 (83.59%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPNLVEEADVIRKYDPHSNTYNAGWR 60
           MLNMTTLLTSFVQG  +KV KCGVC LVGHPNDKCP ++E+ +++RKYDP+ NTYN+GWR
Sbjct: 54  MLNMTTLLTSFVQGTPLKVTKCGVCRLVGHPNDKCPEVIEDVNIVRKYDPYGNTYNSGWR 113

Query: 61  DNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKGLATNTISFQNEMKQQMSHLTNAISKL 120
           DNPNLRWGNDNQ+ +QA  +S+NQGTNLED++K LATNT+SFQ EMKQQM+ LT AISK+
Sbjct: 114 DNPNLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKM 173

Query: 121 EGKGKLPGQPDHANVSAISLRSGKILETPSSKE-KVTSTPIILENKDEKKEEKLETSSLP 180
           +GKGKLP QPD+ANVSAISLRSGKIL+TP++KE KVTS  + L +K+E KEEK+ET+  P
Sbjct: 174 DGKGKLPAQPDYANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSP 233

Query: 181 SSSSKELHEEFDELP 195
           S+S  +     D  P
Sbjct: 234 SNSKNDKSPRNDFTP 248

[Close]

BLAST of PI0024737 vs. NCBI nr
Match: KAA0047407.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 264.2 bits (674), Expect = 9.8e-67
Identity = 132/198 (66.67%), Postives = 164/198 (82.83%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPNLVEEADVIRKYDPHSNTYNAGWR 60
           MLNMTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP ++E+ +++RKYDPH NTYN+GWR
Sbjct: 139 MLNMTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWR 198

Query: 61  DNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKGLATNTISFQNEMKQQMSHLTNAISKL 120
           DNPNLRWGNDNQ+ +QA S+S+NQGTNLED++K LATNT+SFQ EMKQQM+ LT AISK+
Sbjct: 199 DNPNLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKM 258

Query: 121 EGKGKLPGQPDHANVSAISLRSGKILETPSSKE-KVTSTPIILENKDEKKEEKLETSSLP 180
           +GKGKL  Q ++ANVSA+SLRSGKIL+TP++KE K TS P+ L  K+E KEEK+ET+  P
Sbjct: 259 DGKGKLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSP 318

Query: 181 SSSSKELHEEFDELPINN 198
            +S        D+ P+N+
Sbjct: 319 YNSKN------DKFPLND 330

[Close]

BLAST of PI0024737 vs. NCBI nr
Match: TYK07549.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 263.8 bits (673), Expect = 1.3e-66
Identity = 128/176 (72.73%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPNLVEEADVIRKYDPHSNTYNAGWR 60
           MLNMTTLLTSFVQG   KV KCGVCGLVGHPNDKCP ++E+ +++R+YDPHSNTYN+GWR
Sbjct: 103 MLNMTTLLTSFVQGTPPKVTKCGVCGLVGHPNDKCPKVIEDVNIVRRYDPHSNTYNSGWR 162

Query: 61  DNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKGLATNTISFQNEMKQQMSHLTNAISKL 120
           DN NLRWGNDNQ+ +QA S+S+NQGTNLED++K LATNT+SFQ +MKQQM+ LT AISK+
Sbjct: 163 DNLNLRWGNDNQKYTQAPSTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTAISKM 222

Query: 121 EGKGKLPGQPDHANVSAISLRSGKILETPSSKE-KVTSTPIILENKDEKKEEKLET 176
           +GKGKLP QPDHANVSAISLRSGKIL+TP++KE K+TS P+ L +K+E KEEK+++
Sbjct: 223 DGKGKLPAQPDHANVSAISLRSGKILDTPTTKEKKLTSKPLPLNSKNESKEEKVDS 278

[Close]

BLAST of PI0024737 vs. NCBI nr
Match: XP_008465649.1 (PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo])

HSP 1 Score: 262.3 bits (669), Expect = 3.7e-66
Identity = 133/198 (67.17%), Postives = 167/198 (84.34%), Query Frame = 0


Query: 1   MLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPNLVEEADVIRKYDPHSNTYNAGWR 60
           MLNMTTLLTSFVQG ++KV KCGVCGLVG+PNDKCP ++E+ +++R+YDPH NTYN GWR
Sbjct: 53  MLNMTTLLTSFVQGTALKVTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPHGNTYNLGWR 112

Query: 61  DNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKGLATNTISFQNEMKQQMSHLTNAISKL 120
           DNPNLRWGNDNQ+ +QA  +S+NQGTNLED++K LATNT+SFQ +MKQQM+ LT  ISK+
Sbjct: 113 DNPNLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTVISKM 172

Query: 121 EGKGKLPGQPDHANVSAISLRSGKILETPSSKE-KVTSTPIILENKDEKKEEKLETSSLP 180
           +GKGKLP QPDH NVSAISLRSGKIL+TP++KE KVTS  + L +K++ KEEK+ET+S  
Sbjct: 173 DGKGKLPAQPDHVNVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNQSKEEKVETNS-S 232

Query: 181 SSSSKELHEEFDELPINN 198
           SS+SK      D+ P+N+
Sbjct: 233 SSNSKN-----DKSPLND 244

The following BLAST results are available for this feature:

BLAST of PI0024737 vs.


Match Name	E-value	Identity	Description

BLAST of PI0024737 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VQ60	1.6e-67	68.34	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5D3CRR8	4.8e-67	66.67	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
E5GBZ4	4.8e-67	68.21	Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5D3CB46	6.2e-67	72.73	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3CQU8	1.8e-66	67.17	uncharacterized protein LOC103503291 OS=Cucumis melo OX=3656 GN=LOC103503291 PE=...	[more]

BLAST of PI0024737 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067359.1	3.4e-67	68.34	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotranspos...	[more]
ADN33993.1	9.8e-67	68.21	retrotransposon gag protein [Cucumis melo subsp. melo]	[more]
KAA0047407.1	9.8e-67	66.67	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotranspos...	[more]
TYK07549.1	1.3e-66	72.73	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
XP_008465649.1	3.7e-66	67.17	PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]	[more]

BLAST of PI0024737 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 103..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024737.1	PI0024737.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding