PI0024532 (gene) Melon (PI 482460) v1

Overview


Name	PI0024532
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Mads box protein
Location	chr11: 29054323 .. 29054894 (-)
RNA-Seq Expression	PI0024532
Synteny	PI0024532

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAACATTAGGCCGTCAAAAAATCGAAATCAAGAAGCTACAAGTGAAGAGTAAACGGCAAGTAACCTTCTCCAAACGCCGTGCCAAACTTTTTAACAAGGCGGCGAGCTCTCCATTCTTTCCGGCGCTGAGATTGCTATCCTCGTCTTCTCTTCCACTGGCAAGATCTTTACATTCGGCCATCCTAATGTTGATTTGCTCATAGATCGTTTCCTAACGTCGAATTTTGTTCCGCCGAAGCCGGCGGAGGCGTACCTCCCTTTAGCGGAGTTGAATCGCGATTTGAAGGATGCGACTGCGGAGTTTGAAGTAGAGAAGAGGCGCGCTGAGAGCATGAGGAAAATCGGGGGGTTTTGGTGGGATGAGGCGATGGAATGTATGGGAATTGAGGATTTGAAGCGATTCCGATCGTCGTTGATGGAACTCAGGAGAAAAGTTGCAGAGAGAGTGGAAAAATTGGCGGCGGTGAGGAATCGAGAGGTTCTAATGACTCCGCCGTCGTTTCATCTTGCTGAAAATCACTCCGTCGCGACGGAAATTGAGGGTTTGGGGTTTGGGTTTCTCTAA

mRNA sequence

ATGAAGAAAACATTAGGCCGTCAAAAAATCGAAATCAAGAAGCTACAAGTGAAGAGTAAACGGCAAGTAACCTTCTCCAAACGCCGTGCCAAACTTTTTAACAAGGCGATTGCTATCCTCGTCTTCTCTTCCACTGGCAAGATCTTTACATTCGGCCATCCTAATGTTGATTTGCTCATAGATCGTTTCCTAACGTCGAATTTTGTTCCGCCGAAGCCGGCGGAGGCGTACCTCCCTTTAGCGGAGTTGAATCGCGATTTGAAGGATGCGACTGCGGAGTTTGAAGTAGAGAAGAGGCGCGCTGAGAGCATGAGGAAAATCGGGGGGTTTTGGTGGGATGAGGCGATGGAATGTATGGGAATTGAGGATTTGAAGCGATTCCGATCGTCGTTGATGGAACTCAGGAGAAAAGTTGCAGAGAGAGTGGAAAAATTGGCGGCGGTGAGGAATCGAGAGGTTCTAATGACTCCGCCGTCGTTTCATCTTGCTGAAAATCACTCCGTCGCGACGGAAATTGAGGGTTTGGGGTTTGGGTTTCTCTAA

Coding sequence (CDS)

ATGAAGAAAACATTAGGCCGTCAAAAAATCGAAATCAAGAAGCTACAAGTGAAGAGTAAACGGCAAGTAACCTTCTCCAAACGCCGTGCCAAACTTTTTAACAAGGCGATTGCTATCCTCGTCTTCTCTTCCACTGGCAAGATCTTTACATTCGGCCATCCTAATGTTGATTTGCTCATAGATCGTTTCCTAACGTCGAATTTTGTTCCGCCGAAGCCGGCGGAGGCGTACCTCCCTTTAGCGGAGTTGAATCGCGATTTGAAGGATGCGACTGCGGAGTTTGAAGTAGAGAAGAGGCGCGCTGAGAGCATGAGGAAAATCGGGGGGTTTTGGTGGGATGAGGCGATGGAATGTATGGGAATTGAGGATTTGAAGCGATTCCGATCGTCGTTGATGGAACTCAGGAGAAAAGTTGCAGAGAGAGTGGAAAAATTGGCGGCGGTGAGGAATCGAGAGGTTCTAATGACTCCGCCGTCGTTTCATCTTGCTGAAAATCACTCCGTCGCGACGGAAATTGAGGGTTTGGGGTTTGGGTTTCTCTAA

Protein sequence

MKKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKAIAILVFSSTGKIFTFGHPNVDLLIDRFLTSNFVPPKPAEAYLPLAELNRDLKDATAEFEVEKRRAESMRKIGGFWWDEAMECMGIEDLKRFRSSLMELRRKVAERVEKLAAVRNREVLMTPPSFHLAENHSVATEIEGLGFGFL

Homology

[Close]

BLAST of PI0024532 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.9e-20
Identity = 60/162 (37.04%), Postives = 95/162 (58.64%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFT 60
           +KK+ GRQKIE+ K++ +S  QVTFSKRR+ LF KA          +AI+VFS   K+F+
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDLLIDRFLTSNFVPP--------KPAEAYLPLAELNRDLKDATAEFEVEKRRAE 120
           FGHPNVD +IDRF+ +N +PP        +       + +LN  L    ++ E EK++ +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 SMRKIG------GFWWDEAMECMGIEDLKRFRSSLMELRRKV 139
            ++KI       G WW++ +E + +  L+ F+ +L  L++ V
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVV 163

[Close]

BLAST of PI0024532 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.7e-16
Identity = 61/159 (38.36%), Postives = 92/159 (57.86%), Query Frame = 0


Query: 2   KKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFTF 61
           K+++GRQKI + K++ +S RQVTFSKRRA LF KA          I I+VFS   K F+F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDLLIDRFLTSNFVPPKPAEAY--LPLA--ELNRDLKDATAEFEVEKR-------- 121
           GHP+V+ ++DR+++ N +    ++     P A  ELN  L    +E E EK+        
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 RAESMRKIGGFWWDEAMECMGIEDLKRFRSSLMELRRKV 139
           R ES+R+    WW++ +E M +  L+  + +L ELR+ V
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of PI0024532 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.4e-15
Identity = 63/189 (33.33%), Postives = 100/189 (52.91%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFT 60
           +KKTLGR+K+EI K+  +S  QVTFSKR+A LF KA          IA++VFS  GK+F+
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDLLIDRF----LTSNFVPPKPAEAYLPLAELNRDLKDATAEFEVEKR----RAE 120
           FGHPNVD+L+D F    +  N      +   L +  LN+   +  AE E E++    RA+
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 SMRKIGGF--WWDEAMECMGIEDLKRFRSSLMELRRKVAERVEKLAAVRNREVLMTPPSF 170
           + R+      WW ++   + +         L +L++ V E+  +L       +  T P+F
Sbjct: 122 NERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQL-------IHQTNPNF 181

[Close]

BLAST of PI0024532 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.9e-13
Identity = 56/164 (34.15%), Postives = 84/164 (51.22%), Query Frame = 0


Query: 2   KKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFTF 61
           +K LGR+KIE+ K+  +S  QVTFSKRR+ LF K           IAI+VFS +GK ++F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVDLLID----RFLTSNFVPPKPAEAYLPLAELNRDLKDATAEFEVEKRRAESM--- 121
           GHPNV+ L+D    R +  N      +   L +  LN  L +  AE E E+   +S+   
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQN 122

Query: 122 ---RKIGGFWWDEAMECMGIEDLKRFRSSLMELRRKVAERVEKL 146
               K    WW  +   + +      +  L  L+++V E+V +L
Sbjct: 123 ERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQL 166

[Close]

BLAST of PI0024532 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.2e-10
Identity = 51/162 (31.48%), Postives = 84/162 (51.85%), Query Frame = 0


Query: 5   LGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFTFGHP 64
           +GR+KI+++ +Q  + RQVTFSKRR  LF KA          + I+VFS  GK F++G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 65  NVDLLIDRFL----TSNFVPPKPAEAYLP-LAELNRDLKDATAEFEVEKRRA----ESMR 124
           N+D + +RF+     S+    + +  Y P L  L+  L     E E EK R     E + 
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 120

Query: 125 KIGGFWWDEAMECMGIEDLKRFRSSLMELRRKVAERVEKLAA 148
             G   + E++E + +++L  ++  L  +  ++  +V  L A
Sbjct: 121 SAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQA 162

[Close]

BLAST of PI0024532 vs. ExPASy TrEMBL
Match: A0A0A0LLS2 (Mads box protein OS=Cucumis sativus OX=3659 GN=Csa_2G277060 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 5.4e-69
Identity = 148/185 (80.00%), Postives = 155/185 (83.78%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFT 60
           MKK+LGRQKIEIKKL VKS+RQVTFSKRRA LFNKA          IAILVFSST KI+T
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVDLLIDRFLTSNFVPPKPAEAYLPLAELNRDLKDATAEFEVEKRRAESMRKIGGF 120
           FGHPNVD LIDRFLTSNFVPPKP EAYLPL ELNRDLKD TAEFE EKRRAE MRK GGF
Sbjct: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120

Query: 121 WWDEAMECMGIEDLKRFRSSLMELRRKVAERVEKLAAVRNREVLMTPPSFHLAENHSVAT 176
           WWDEAMECMGIEDLKRFRSSLMELR KVAERVE+LAAVRN+  L T PSFH   + SVAT
Sbjct: 121 WWDEAMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNQGFLTTSPSFH---HLSVAT 180

[Close]

BLAST of PI0024532 vs. ExPASy TrEMBL
Match: A0A5A7TV93 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003090 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.5e-66
Identity = 148/191 (77.49%), Postives = 159/191 (83.25%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFT 60
           MKK+ GRQKIEIKKL VKS+RQVTFSKRRA LFNKA          IAILVFSSTGKI+T
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDLLIDRFLTSNFVPPKPAEAYLPLAELNRDLKDATAEFEVEKRRAESMRKIGGF 120
           FGHPNVD+LIDRFLTSNFVP KPAEAYLPL ELNRDLKDATAEFE+EK RAE MR  GGF
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120

Query: 121 WWDEA-MECMGIEDLKRFRSSLMELRRKVAERVEKLAAVRNREVLMTPPSFHLAENHSVA 180
           WWDE  MECMGIE+LKRFRSSLMELR KVAE+VE+LAAV N+EVL+T PSFH   +H  A
Sbjct: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFH---HH--A 180

[Close]

BLAST of PI0024532 vs. ExPASy TrEMBL
Match: A0A1S3C5V9 (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103497390 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.5e-66
Identity = 148/191 (77.49%), Postives = 159/191 (83.25%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFT 60
           MKK+ GRQKIEIKKL VKS+RQVTFSKRRA LFNKA          IAILVFSSTGKI+T
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDLLIDRFLTSNFVPPKPAEAYLPLAELNRDLKDATAEFEVEKRRAESMRKIGGF 120
           FGHPNVD+LIDRFLTSNFVP KPAEAYLPL ELNRDLKDATAEFE+EK RAE MR  GGF
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120

Query: 121 WWDEA-MECMGIEDLKRFRSSLMELRRKVAERVEKLAAVRNREVLMTPPSFHLAENHSVA 180
           WWDE  MECMGIE+LKRFRSSLMELR KVAE+VE+LAAV N+EVL+T PSFH   +H  A
Sbjct: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFH---HH--A 180

[Close]

BLAST of PI0024532 vs. ExPASy TrEMBL
Match: A0A5D3BKF4 (Aspartic proteinase CDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00600 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.4e-64
Identity = 145/187 (77.54%), Postives = 156/187 (83.42%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFT 60
           MKK+ GRQKIEIKKL VKS+RQVTFSKRRA LFNKA          IAILVFSSTGKI+T
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDLLIDRFLTSNFVPPKPAEAYLPLAELNRDLKDATAEFEVEKRRAESMRKIGGF 120
           FGHPNVD+LIDRFLTSNFVP KPAEAYLPL ELNRDLKDATAEFE+EK RAE MR  GGF
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120

Query: 121 WWDEA-MECMGIEDLKRFRSSLMELRRKVAERVEKLAAVRNREVLMTPPSFHLAENHSVA 177
           WWDE  MECMGIE+LKRFRSSLMELR KVAE+VE+LAAV N+EVL+T PSFH   +H  A
Sbjct: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFH---HH--A 180

[Close]

BLAST of PI0024532 vs. ExPASy TrEMBL
Match: A0A6J1KVC9 (agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111499040 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.9e-52
Identity = 122/204 (59.80%), Postives = 141/204 (69.12%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFT 60
           MKKTLGRQKIEIKKL+ KS +QVTFSKRRA LF KA          +AI+VFS   K+F 
Sbjct: 13  MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 72

Query: 61  FGHPNVDLLIDRFLTSNFVPPKPAEAYLPLAELNRDLKDATAEFEVEKRRAESM------ 120
           FGHPNVD+L+DR+LT N  PPKPAE+Y+P+AE NRD  D   EFE EK+RAE +      
Sbjct: 73  FGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQASEE 132

Query: 121 -RKIGGFWWDEAMECMGIEDLKRFRSSLMELRRKVAERVEKLAAVRNREVL--------- 178
            R  GGFWW+EA+E M +E+LK FRSSLM+LR KVAE+VEKL AVR    L         
Sbjct: 133 SRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALPPPPP 192

[Close]

BLAST of PI0024532 vs. NCBI nr
Match: XP_004149713.1 (agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN61964.1 hypothetical protein Csa_006560 [Cucumis sativus])

HSP 1 Score: 270.4 bits (690), Expect = 1.1e-68
Identity = 148/185 (80.00%), Postives = 155/185 (83.78%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFT 60
           MKK+LGRQKIEIKKL VKS+RQVTFSKRRA LFNKA          IAILVFSST KI+T
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVDLLIDRFLTSNFVPPKPAEAYLPLAELNRDLKDATAEFEVEKRRAESMRKIGGF 120
           FGHPNVD LIDRFLTSNFVPPKP EAYLPL ELNRDLKD TAEFE EKRRAE MRK GGF
Sbjct: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120

Query: 121 WWDEAMECMGIEDLKRFRSSLMELRRKVAERVEKLAAVRNREVLMTPPSFHLAENHSVAT 176
           WWDEAMECMGIEDLKRFRSSLMELR KVAERVE+LAAVRN+  L T PSFH   + SVAT
Sbjct: 121 WWDEAMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNQGFLTTSPSFH---HLSVAT 180

[Close]

BLAST of PI0024532 vs. NCBI nr
Match: XP_038902722.1 (agamous-like MADS-box protein AGL62 [Benincasa hispida])

HSP 1 Score: 264.2 bits (674), Expect = 8.0e-67
Identity = 148/207 (71.50%), Postives = 160/207 (77.29%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFT 60
           MKK+LGRQKIEIKKL+VKS++QVTFSKRRA LFNKA          IAILVFS TGKI+T
Sbjct: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIAILVFSPTGKIYT 60

Query: 61  FGHPNVDLLIDRFLTSNFVPPKPAEAYLPLAELNRDLKDATAEFEVEKRRA---ESMRKI 120
           FGHPNVDLL+DR LT+NF PPKPAE+YLPLAELNRD  DA AEFE+EKRRA   E MR  
Sbjct: 61  FGHPNVDLLLDRSLTANFAPPKPAESYLPLAELNRDFDDAMAEFEIEKRRAAEVERMRSS 120

Query: 121 GGFWWDEAMECMGIEDLKRFRSSLMELRRKVAERVEKLAAVRNREVLMTP---------- 180
           GGFWWDE +ECMGIEDLKRFRSSL+ELR KVAERVEKLAAVRN  +LM            
Sbjct: 121 GGFWWDEPVECMGIEDLKRFRSSLVELRGKVAERVEKLAAVRNGGLLMPAASFHLTGNLQ 180

[Close]

BLAST of PI0024532 vs. NCBI nr
Match: XP_008457781.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo] >KAA0045787.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa])

HSP 1 Score: 261.5 bits (667), Expect = 5.2e-66
Identity = 148/191 (77.49%), Postives = 159/191 (83.25%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFT 60
           MKK+ GRQKIEIKKL VKS+RQVTFSKRRA LFNKA          IAILVFSSTGKI+T
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDLLIDRFLTSNFVPPKPAEAYLPLAELNRDLKDATAEFEVEKRRAESMRKIGGF 120
           FGHPNVD+LIDRFLTSNFVP KPAEAYLPL ELNRDLKDATAEFE+EK RAE MR  GGF
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120

Query: 121 WWDEA-MECMGIEDLKRFRSSLMELRRKVAERVEKLAAVRNREVLMTPPSFHLAENHSVA 180
           WWDE  MECMGIE+LKRFRSSLMELR KVAE+VE+LAAV N+EVL+T PSFH   +H  A
Sbjct: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFH---HH--A 180

[Close]

BLAST of PI0024532 vs. NCBI nr
Match: TYJ99494.1 (aspartic proteinase CDR1-like [Cucumis melo var. makuwa])

HSP 1 Score: 255.8 bits (652), Expect = 2.9e-64
Identity = 145/187 (77.54%), Postives = 156/187 (83.42%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFT 60
           MKK+ GRQKIEIKKL VKS+RQVTFSKRRA LFNKA          IAILVFSSTGKI+T
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDLLIDRFLTSNFVPPKPAEAYLPLAELNRDLKDATAEFEVEKRRAESMRKIGGF 120
           FGHPNVD+LIDRFLTSNFVP KPAEAYLPL ELNRDLKDATAEFE+EK RAE MR  GGF
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120

Query: 121 WWDEA-MECMGIEDLKRFRSSLMELRRKVAERVEKLAAVRNREVLMTPPSFHLAENHSVA 177
           WWDE  MECMGIE+LKRFRSSLMELR KVAE+VE+LAAV N+EVL+T PSFH   +H  A
Sbjct: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFH---HH--A 180

[Close]

BLAST of PI0024532 vs. NCBI nr
Match: XP_023006252.1 (agamous-like MADS-box protein AGL62 [Cucurbita maxima])

HSP 1 Score: 213.4 bits (542), Expect = 1.6e-51
Identity = 122/204 (59.80%), Postives = 141/204 (69.12%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFT 60
           MKKTLGRQKIEIKKL+ KS +QVTFSKRRA LF KA          +AI+VFS   K+F 
Sbjct: 13  MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 72

Query: 61  FGHPNVDLLIDRFLTSNFVPPKPAEAYLPLAELNRDLKDATAEFEVEKRRAESM------ 120
           FGHPNVD+L+DR+LT N  PPKPAE+Y+P+AE NRD  D   EFE EK+RAE +      
Sbjct: 73  FGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQASEE 132

Query: 121 -RKIGGFWWDEAMECMGIEDLKRFRSSLMELRRKVAERVEKLAAVRNREVL--------- 178
            R  GGFWW+EA+E M +E+LK FRSSLM+LR KVAE+VEKL AVR    L         
Sbjct: 133 SRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALPPPPP 192

[Close]

BLAST of PI0024532 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 99.0 bits (245), Expect = 4.2e-21
Identity = 60/162 (37.04%), Postives = 95/162 (58.64%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFT 60
           +KK+ GRQKIE+ K++ +S  QVTFSKRR+ LF KA          +AI+VFS   K+F+
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDLLIDRFLTSNFVPP--------KPAEAYLPLAELNRDLKDATAEFEVEKRRAE 120
           FGHPNVD +IDRF+ +N +PP        +       + +LN  L    ++ E EK++ +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 SMRKIG------GFWWDEAMECMGIEDLKRFRSSLMELRRKV 139
            ++KI       G WW++ +E + +  L+ F+ +L  L++ V
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVV 163

[Close]

BLAST of PI0024532 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 85.5 bits (210), Expect = 4.8e-17
Identity = 61/159 (38.36%), Postives = 92/159 (57.86%), Query Frame = 0


Query: 2   KKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFTF 61
           K+++GRQKI + K++ +S RQVTFSKRRA LF KA          I I+VFS   K F+F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDLLIDRFLTSNFVPPKPAEAY--LPLA--ELNRDLKDATAEFEVEKR-------- 121
           GHP+V+ ++DR+++ N +    ++     P A  ELN  L    +E E EK+        
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 RAESMRKIGGFWWDEAMECMGIEDLKRFRSSLMELRRKV 139
           R ES+R+    WW++ +E M +  L+  + +L ELR+ V
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of PI0024532 vs. TAIR 10
Match: AT1G65360.1 (AGAMOUS-like 23 )

HSP 1 Score: 82.0 bits (201), Expect = 5.3e-16
Identity = 63/189 (33.33%), Postives = 100/189 (52.91%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFT 60
           +KKTLGR+K+EI K+  +S  QVTFSKR+A LF KA          IA++VFS  GK+F+
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDLLIDRF----LTSNFVPPKPAEAYLPLAELNRDLKDATAEFEVEKR----RAE 120
           FGHPNVD+L+D F    +  N      +   L +  LN+   +  AE E E++    RA+
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 SMRKIGGF--WWDEAMECMGIEDLKRFRSSLMELRRKVAERVEKLAAVRNREVLMTPPSF 170
           + R+      WW ++   + +         L +L++ V E+  +L       +  T P+F
Sbjct: 122 NERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQL-------IHQTNPNF 181

[Close]

BLAST of PI0024532 vs. TAIR 10
Match: AT1G01530.1 (AGAMOUS-like 28 )

HSP 1 Score: 75.5 bits (184), Expect = 4.9e-14
Identity = 56/164 (34.15%), Postives = 84/164 (51.22%), Query Frame = 0


Query: 2   KKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFTF 61
           +K LGR+KIE+ K+  +S  QVTFSKRR+ LF K           IAI+VFS +GK ++F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVDLLID----RFLTSNFVPPKPAEAYLPLAELNRDLKDATAEFEVEKRRAESM--- 121
           GHPNV+ L+D    R +  N      +   L +  LN  L +  AE E E+   +S+   
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQN 122

Query: 122 ---RKIGGFWWDEAMECMGIEDLKRFRSSLMELRRKVAERVEKL 146
               K    WW  +   + +      +  L  L+++V E+V +L
Sbjct: 123 ERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQL 166

[Close]

BLAST of PI0024532 vs. TAIR 10
Match: AT4G36590.1 (MADS-box transcription factor family protein )

HSP 1 Score: 72.4 bits (176), Expect = 4.2e-13
Identity = 56/179 (31.28%), Postives = 92/179 (51.40%), Query Frame = 0


Query: 1   MKKTLGRQKIEIKKLQVKSKRQVTFSKRRAKLFNKA----------IAILVFSSTGKIFT 60
           ++ T GRQKIE+KK++ +S  QVTFSKRR  LF KA          I ++VFS  GK+F+
Sbjct: 2   VRSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFS 61

Query: 61  FGHPNVDLLIDRFLTSN--------------FVPPKPAEAYLPLAELNRDLKDATAEFEV 120
           FGHP+V  LI RF   N               V  +P      +  LN  L +  A  E 
Sbjct: 62  FGHPSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDR---NIQYLNNILTEVLANQEK 121

Query: 121 EKRR-------AESMRKIGGFWWDEAMECMGIEDLKRFRSSLMELRRKVAERVEKLAAV 149
           EK++        ES  ++G  W+++ ++ + + +  +  S+L ++++K+   + + + V
Sbjct: 122 EKQKRMVLDLLKESREQVGN-WYEKDVKDLDMNETNQLISALQDVKKKLVREMSQYSQV 176

The following BLAST results are available for this feature:

BLAST of PI0024532 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK2	5.9e-20	37.04	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q4PSU4	6.7e-16	38.36	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
O80807	7.4e-15	33.33	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]
Q9LMM8	6.9e-13	34.15	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]
O64703	3.2e-10	31.48	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]

BLAST of PI0024532 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLS2	5.4e-69	80.00	Mads box protein OS=Cucumis sativus OX=3659 GN=Csa_2G277060 PE=4 SV=1	[more]
A0A5A7TV93	2.5e-66	77.49	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3C5V9	2.5e-66	77.49	agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103497390 PE=4...	[more]
A0A5D3BKF4	1.4e-64	77.54	Aspartic proteinase CDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1KVC9	7.9e-52	59.80	agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111499040 ...	[more]

BLAST of PI0024532 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149713.1	1.1e-68	80.00	agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN61964.1 hypothetical p...	[more]
XP_038902722.1	8.0e-67	71.50	agamous-like MADS-box protein AGL62 [Benincasa hispida]	[more]
XP_008457781.1	5.2e-66	77.49	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo] >KAA0045787.1 agam...	[more]
TYJ99494.1	2.9e-64	77.54	aspartic proteinase CDR1-like [Cucumis melo var. makuwa]	[more]
XP_023006252.1	1.6e-51	59.80	agamous-like MADS-box protein AGL62 [Cucurbita maxima]	[more]

BLAST of PI0024532 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60440.1	4.2e-21	37.04	AGAMOUS-like 62	[more]
AT2G24840.1	4.8e-17	38.36	AGAMOUS-like 61	[more]
AT1G65360.1	5.3e-16	33.33	AGAMOUS-like 23	[more]
AT1G01530.1	4.9e-14	34.15	AGAMOUS-like 28	[more]
AT4G36590.1	4.2e-13	31.28	MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 131..151
None	No IPR available	COILS	Coil	Coil	coord: 80..100
None	No IPR available	PANTHER	PTHR11945:SF618	AGAMOUS-LIKE MADS-BOX PROTEIN AGL61	coord: 5..146
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 5..146
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 7..27 score: 51.47 coord: 27..42 score: 43.15
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 5..54 e-value: 2.5E-12 score: 56.9
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 18..36 e-value: 2.8E-5 score: 23.6
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 5..55 score: 14.899588
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 18..71 e-value: 6.2E-11 score: 44.0
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 6..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024532.1	PI0024532.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding