PI0024509 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCCGCCCCACTACTCTGCTCTCCTTCTTCAAACCATTTGGATTTTGATCAGAGTTTCCACACAAATTCCCTTCCTTTTGGAGAAGGAGAATTCAACCATCCATCAATGGCGTCTTCCAATTCTACTTTTAGGGCTTTTAAAGCTCTCTTCACCTTCTTCTCCCTCATCTTCTTCATTCTTTCTCCACTCGTTGACGCAGCCCCTGCTCCCGCTCCTTCTAGCGACGGTATCTACCTACATTTCTTGTCTATGCATTCTCCTTCTGTTCTTTGTTGATTGACACTGGATAATCTAGGTCTTGCTTTCAAATTATTAGGGTTAGGGATTTTTGTTGTGAGAAGTAGGGAAATAATGTTGATTTTGTAATTTTGAAAACAGGGACCTCCATTGATCAGGGAATTGCGTACGTTCTGATGCTAGTGGCGTTGGTTCTCACGTATCTAATTCACCCTCTCGATGCATCTTCTTACAATTTTTTCTGAATTGAATTGAATTGAATTCTTCTTCCTAGGATTGTAGCAATGTAGGCGATGTTTGTGGATGTTTGAGAAGGAACGAGACCCAACTTTTTCTTCTCTCTTTTTGTGATAAAATCAAAGTGTATATTTGGGTTTCGCAGATTTTGAACAATTGCTCCATTTAATTCATTGTTTATTCGATTA CTCCGCCCCACTACTCTGCTCTCCTTCTTCAAACCATTTGGATTTTGATCAGAGTTTCCACACAAATTCCCTTCCTTTTGGAGAAGGAGAATTCAACCATCCATCAATGGCGTCTTCCAATTCTACTTTTAGGGCTTTTAAAGCTCTCTTCACCTTCTTCTCCCTCATCTTCTTCATTCTTTCTCCACTCGTTGACGCAGCCCCTGCTCCCGCTCCTTCTAGCGACGGGACCTCCATTGATCAGGGAATTGCGTACGTTCTGATGCTAGTGGCGTTGGTTCTCACGTATCTAATTCACCCTCTCGATGCATCTTCTTACAATTTTTTCTGAATTGAATTGAATTGAATTCTTCTTCCTAGGATTGTAGCAATGTAGGCGATGTTTGTGGATGTTTGAGAAGGAACGAGACCCAACTTTTTCTTCTCTCTTTTTGTGATAAAATCAAAGTGTATATTTGGGTTTCGCAGATTTTGAACAATTGCTCCATTTAATTCATTGTTTATTCGATTA ATGGCGTCTTCCAATTCTACTTTTAGGGCTTTTAAAGCTCTCTTCACCTTCTTCTCCCTCATCTTCTTCATTCTTTCTCCACTCGTTGACGCAGCCCCTGCTCCCGCTCCTTCTAGCGACGGGACCTCCATTGATCAGGGAATTGCGTACGTTCTGATGCTAGTGGCGTTGGTTCTCACGTATCTAATTCACCCTCTCGATGCATCTTCTTACAATTTTTTCTGA MASSNSTFRAFKALFTFFSLIFFILSPLVDAAPAPAPSSDGTSIDQGIAYVLMLVALVLTYLIHPLDASSYNFF Homology
BLAST of PI0024509 vs. ExPASy Swiss-Prot
Match: Q9M373 (Arabinogalactan protein 20 OS=Arabidopsis thaliana OX=3702 GN=AGP20 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 6.1e-16 Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0
BLAST of PI0024509 vs. ExPASy Swiss-Prot
Match: O82337 (Arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=AGP16 PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 3.0e-15 Identity = 49/75 (65.33%), Postives = 56/75 (74.67%), Query Frame = 0
BLAST of PI0024509 vs. ExPASy Swiss-Prot
Match: Q8L9T8 (Arabinogalactan protein 41 OS=Arabidopsis thaliana OX=3702 GN=AGP41 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 2.4e-12 Identity = 41/59 (69.49%), Postives = 46/59 (77.97%), Query Frame = 0
BLAST of PI0024509 vs. ExPASy Swiss-Prot
Match: Q9FK16 (Arabinogalactan protein 22 OS=Arabidopsis thaliana OX=3702 GN=AGP22 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.5e-09 Identity = 32/52 (61.54%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of PI0024509 vs. ExPASy TrEMBL
Match: A0A0A0L7A0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120410 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.0e-26 Identity = 70/76 (92.11%), Postives = 71/76 (93.42%), Query Frame = 0
BLAST of PI0024509 vs. ExPASy TrEMBL
Match: A0A6J1E8M6 (arabinogalactan peptide 16-like OS=Cucurbita moschata OX=3662 GN=LOC111431859 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 3.4e-25 Identity = 67/81 (82.72%), Postives = 70/81 (86.42%), Query Frame = 0
BLAST of PI0024509 vs. ExPASy TrEMBL
Match: A0A6J1IQM6 (arabinogalactan peptide 20-like OS=Cucurbita maxima OX=3661 GN=LOC111479127 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 5.8e-25 Identity = 66/81 (81.48%), Postives = 70/81 (86.42%), Query Frame = 0
BLAST of PI0024509 vs. ExPASy TrEMBL
Match: A0A6J1D1D7 (arabinogalactan peptide 20-like OS=Momordica charantia OX=3673 GN=LOC111016381 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23 Identity = 65/79 (82.28%), Postives = 70/79 (88.61%), Query Frame = 0
BLAST of PI0024509 vs. ExPASy TrEMBL
Match: A0A6J1F1F2 (arabinogalactan peptide 20-like OS=Cucurbita moschata OX=3662 GN=LOC111441255 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.5e-20 Identity = 60/78 (76.92%), Postives = 65/78 (83.33%), Query Frame = 0
BLAST of PI0024509 vs. NCBI nr
Match: XP_004133836.1 (arabinogalactan protein 41 [Cucumis sativus] >KGN56462.1 hypothetical protein Csa_011333 [Cucumis sativus]) HSP 1 Score: 128.6 bits (322), Expect = 2.2e-26 Identity = 70/76 (92.11%), Postives = 71/76 (93.42%), Query Frame = 0
BLAST of PI0024509 vs. NCBI nr
Match: XP_038905636.1 (arabinogalactan protein 41-like [Benincasa hispida]) HSP 1 Score: 124.4 bits (311), Expect = 4.1e-25 Identity = 67/76 (88.16%), Postives = 70/76 (92.11%), Query Frame = 0
BLAST of PI0024509 vs. NCBI nr
Match: XP_023528757.1 (arabinogalactan peptide 16-like [Cucurbita pepo subsp. pepo] >KAG7019041.1 Arabinogalactan peptide 16 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 124.4 bits (311), Expect = 4.1e-25 Identity = 67/79 (84.81%), Postives = 70/79 (88.61%), Query Frame = 0
BLAST of PI0024509 vs. NCBI nr
Match: XP_022924337.1 (arabinogalactan peptide 16-like [Cucurbita moschata] >KAG6582645.1 Arabinogalactan protein 16, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 123.6 bits (309), Expect = 7.0e-25 Identity = 67/81 (82.72%), Postives = 70/81 (86.42%), Query Frame = 0
BLAST of PI0024509 vs. NCBI nr
Match: XP_022979386.1 (arabinogalactan peptide 20-like [Cucurbita maxima]) HSP 1 Score: 122.9 bits (307), Expect = 1.2e-24 Identity = 66/81 (81.48%), Postives = 70/81 (86.42%), Query Frame = 0
BLAST of PI0024509 vs. TAIR 10
Match: AT3G61640.1 (arabinogalactan protein 20 ) HSP 1 Score: 84.3 bits (207), Expect = 4.4e-17 Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0
BLAST of PI0024509 vs. TAIR 10
Match: AT2G46330.1 (arabinogalactan protein 16 ) HSP 1 Score: 82.0 bits (201), Expect = 2.2e-16 Identity = 49/75 (65.33%), Postives = 56/75 (74.67%), Query Frame = 0
BLAST of PI0024509 vs. TAIR 10
Match: AT5G24105.1 (arabinogalactan protein 41 ) HSP 1 Score: 72.4 bits (176), Expect = 1.7e-13 Identity = 41/59 (69.49%), Postives = 46/59 (77.97%), Query Frame = 0
BLAST of PI0024509 vs. TAIR 10
Match: AT5G53250.1 (arabinogalactan protein 22 ) HSP 1 Score: 63.2 bits (152), Expect = 1.0e-10 Identity = 32/52 (61.54%), Postives = 40/52 (76.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|