PI0024487 (gene) Melon (PI 482460) v1

Overview
NamePI0024487
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionTransmembrane protein, putative
Locationchr03: 1565935 .. 1566751 (-)
RNA-Seq ExpressionPI0024487
SyntenyPI0024487
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGTTTATTTATTATTTAAAAAGCAAAAAGAAAGGCACAATCTGGGAAAGAGATTGGACTTTTTAACGCTCCCAAAGATTCCAACTTTTCTGATTACATTGCCTTTTTCTTTTCGTCCTTTTACAGTGCTCAGGGTTCTTATTGTTTCCATCAAAATTACAGTAAAAGAAACATCTTTTTCTCTATTGGTCACGCTTTTCCCCTTCTCCTCCTCTTTACTCCATCTTTGATATCTTCTCGCCATTACAGAGTGACTCTGTTTTCTTCAGGTTCGGATTTGCTGTTAAACAGAAAAGGGGTAAATCTTGTGGCCGTCGCCGGAGCATTACATTATAGTTCTTGCTCCGGCCAAATGTCATTCCCAATTCAACAACAATCTCCGCCGGGAATGCAGCAAAATTATGTCGGCCATCCGGGTAGCGGCTCCGTCGGTCCGGTCATTGGAGTCCTCATCGTCATCATTGTGTTCGCCGTCGTCGCCGTCGTTGTCGGGCGGCTGTGCTCGGGAAGAAGCATAATGGGCTACGGCCATTTCGACTTGGAGAGCTGGGCGGAGACAAAATGTTCTTCTTGCATTGACGGAAGGATTACCCCACCACCGCCGAGGGTCGATGCCTCCACCGCCGCCGCCTCCTCTCTCCCGGCGGGGACAATGGCGGTCGGAACCCAGCAAGAAACTAAGCAAGAAGAACCAGCTTCTCAAAACCCATCTGCCAACGCTTGATTTCTAAGATGGGAATCGTTGATAATTGGATTATTAGCTAAAAAATTTCTCTTTAATTTTCATTTTTTCCCTTCATTTGATTCTTTTTTCTT

mRNA sequence

ATTGTTTATTTATTATTTAAAAAGCAAAAAGAAAGGCACAATCTGGGAAAGAGATTGGACTTTTTAACGCTCCCAAAGATTCCAACTTTTCTGATTACATTGCCTTTTTCTTTTCGTCCTTTTACAGTGCTCAGGGTTCTTATTGTTTCCATCAAAATTACAGTAAAAGAAACATCTTTTTCTCTATTGGTCACGCTTTTCCCCTTCTCCTCCTCTTTACTCCATCTTTGATATCTTCTCGCCATTACAGAGTGACTCTGTTTTCTTCAGGTTCGGATTTGCTGTTAAACAGAAAAGGGGTAAATCTTGTGGCCGTCGCCGGAGCATTACATTATAGTTCTTGCTCCGGCCAAATGTCATTCCCAATTCAACAACAATCTCCGCCGGGAATGCAGCAAAATTATGTCGGCCATCCGGGTAGCGGCTCCGTCGGTCCGGTCATTGGAGTCCTCATCGTCATCATTGTGTTCGCCGTCGTCGCCGTCGTTGTCGGGCGGCTGTGCTCGGGAAGAAGCATAATGGGCTACGGCCATTTCGACTTGGAGAGCTGGGCGGAGACAAAATGTTCTTCTTGCATTGACGGAAGGATTACCCCACCACCGCCGAGGGTCGATGCCTCCACCGCCGCCGCCTCCTCTCTCCCGGCGGGGACAATGGCGGTCGGAACCCAGCAAGAAACTAAGCAAGAAGAACCAGCTTCTCAAAACCCATCTGCCAACGCTTGATTTCTAAGATGGGAATCGTTGATAATTGGATTATTAGCTAAAAAATTTCTCTTTAATTTTCATTTTTTCCCTTCATTTGATTCTTTTTTCTT

Coding sequence (CDS)

ATGTCATTCCCAATTCAACAACAATCTCCGCCGGGAATGCAGCAAAATTATGTCGGCCATCCGGGTAGCGGCTCCGTCGGTCCGGTCATTGGAGTCCTCATCGTCATCATTGTGTTCGCCGTCGTCGCCGTCGTTGTCGGGCGGCTGTGCTCGGGAAGAAGCATAATGGGCTACGGCCATTTCGACTTGGAGAGCTGGGCGGAGACAAAATGTTCTTCTTGCATTGACGGAAGGATTACCCCACCACCGCCGAGGGTCGATGCCTCCACCGCCGCCGCCTCCTCTCTCCCGGCGGGGACAATGGCGGTCGGAACCCAGCAAGAAACTAAGCAAGAAGAACCAGCTTCTCAAAACCCATCTGCCAACGCTTGA

Protein sequence

MSFPIQQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGTMAVGTQQETKQEEPASQNPSANA
Homology
BLAST of PI0024487 vs. ExPASy TrEMBL
Match: A0A5A7V9H6 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43357G00010 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.5e-59
Identity = 120/123 (97.56%), Postives = 123/123 (100.00%), Query Frame = 0

Query: 1   MSFPIQQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGH 60
           MSFPI+QQSPPG+QQNYVGHPGSGSVGPVIGVL+VIIVFAVVAVVVGRLCSGRSIMGYGH
Sbjct: 1   MSFPIEQQSPPGLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGH 60

Query: 61  FDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGTMAVGTQQETKQEEPASQNPS 120
           FDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGTMAVGTQQETKQEEPASQNPS
Sbjct: 61  FDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGTMAVGTQQETKQEEPASQNPS 120

Query: 121 ANA 124
           ANA
Sbjct: 121 ANA 123

BLAST of PI0024487 vs. ExPASy TrEMBL
Match: A0A0A0LP67 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360640 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.9e-57
Identity = 121/124 (97.58%), Postives = 122/124 (98.39%), Query Frame = 0

Query: 1   MSFPIQQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGH 60
           MS PI+QQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGH
Sbjct: 1   MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGH 60

Query: 61  FDLESWAETKCSSCIDGRITPPPPRVDAS-TAAASSLPAGTMAVGTQQETKQEEPASQNP 120
           FDLESWAETKCSSCIDGRITPPPPRVDAS TAAASSLPAGTMAVGTQQETKQEEPASQNP
Sbjct: 61  FDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPASQNP 120

Query: 121 SANA 124
           SANA
Sbjct: 121 SANA 124

BLAST of PI0024487 vs. ExPASy TrEMBL
Match: A0A6J1CRZ5 (uncharacterized protein LOC111014030 OS=Momordica charantia OX=3673 GN=LOC111014030 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.0e-43
Identity = 97/123 (78.86%), Postives = 106/123 (86.18%), Query Frame = 0

Query: 1   MSFPIQQQSP--PGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGY 60
           MS PI+QQSP  PGMQQ Y GH  +GSVGPVIGVL+VIIVFAVVAVVVGRLCSG++IMGY
Sbjct: 1   MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGY 60

Query: 61  GHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGTMAVGTQQETKQEEPASQN 120
           GHFDLESWAETKCSSCIDGRI+PPPPR + S A  ++    TMAV TQQETKQEEPASQN
Sbjct: 61  GHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALPATMAVQTQQETKQEEPASQN 120

Query: 121 PSA 122
           PSA
Sbjct: 121 PSA 123

BLAST of PI0024487 vs. ExPASy TrEMBL
Match: A0A6J1KK79 (uncharacterized protein LOC111496028 OS=Cucurbita maxima OX=3661 GN=LOC111496028 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.5e-38
Identity = 97/126 (76.98%), Postives = 104/126 (82.54%), Query Frame = 0

Query: 1   MSFPIQQQSP--PGMQQNYVGHPGS-GSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMG 60
           MS PI QQSP  PGMQQ Y GH  S GSVGPVIGVL+VIIVFAVVAVVVGRLCSGRSIMG
Sbjct: 1   MSLPIDQQSPPAPGMQQPYGGHASSGGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMG 60

Query: 61  YGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGTMAVGTQQETKQEEPASQ 120
           YGHFDLE WAE KCSSCIDGRI+ P PRV+ STAAA SLPA TM+V    +T+Q+EPASQ
Sbjct: 61  YGHFDLERWAEVKCSSCIDGRISSPSPRVNVSTAAA-SLPAATMSV----QTQQDEPASQ 120

Query: 121 NPSANA 124
           NP  NA
Sbjct: 121 NPPPNA 121

BLAST of PI0024487 vs. ExPASy TrEMBL
Match: A0A6P4ABB2 (uncharacterized protein LOC107420905 OS=Ziziphus jujuba OX=326968 GN=LOC107420905 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 71/125 (56.80%), Postives = 90/125 (72.00%), Query Frame = 0

Query: 1   MSFPIQQQSPP---GMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMG 60
           M+ P+ +Q PP    +QQ +  H   GS+GP+I VL+VIIV  ++AV+VGRLCSG+S+MG
Sbjct: 1   MAMPLYEQPPPPAFTVQQPHSTHSAHGSIGPLIAVLVVIIVLGILAVMVGRLCSGKSMMG 60

Query: 61  YGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGTMAVGTQQETKQEEPASQ 120
           YG FDLESWAE KCSSCIDG+I  P PR + S  + +S+P  TM V T QE  QEE +S 
Sbjct: 61  YGQFDLESWAERKCSSCIDGKINSPLPRTNIS--SCNSVPI-TMPVETHQEIDQEELSSP 120

Query: 121 NPSAN 123
           NPSAN
Sbjct: 121 NPSAN 122

BLAST of PI0024487 vs. NCBI nr
Match: KAA0063096.1 (putative transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 236.9 bits (603), Expect = 9.4e-59
Identity = 120/123 (97.56%), Postives = 123/123 (100.00%), Query Frame = 0

Query: 1   MSFPIQQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGH 60
           MSFPI+QQSPPG+QQNYVGHPGSGSVGPVIGVL+VIIVFAVVAVVVGRLCSGRSIMGYGH
Sbjct: 1   MSFPIEQQSPPGLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGH 60

Query: 61  FDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGTMAVGTQQETKQEEPASQNPS 120
           FDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGTMAVGTQQETKQEEPASQNPS
Sbjct: 61  FDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGTMAVGTQQETKQEEPASQNPS 120

Query: 121 ANA 124
           ANA
Sbjct: 121 ANA 123

BLAST of PI0024487 vs. NCBI nr
Match: XP_031737057.1 (uncharacterized protein LOC116402140 [Cucumis sativus] >KGN62547.1 hypothetical protein Csa_022283 [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 3.9e-57
Identity = 121/124 (97.58%), Postives = 122/124 (98.39%), Query Frame = 0

Query: 1   MSFPIQQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGH 60
           MS PI+QQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGH
Sbjct: 1   MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGH 60

Query: 61  FDLESWAETKCSSCIDGRITPPPPRVDAS-TAAASSLPAGTMAVGTQQETKQEEPASQNP 120
           FDLESWAETKCSSCIDGRITPPPPRVDAS TAAASSLPAGTMAVGTQQETKQEEPASQNP
Sbjct: 61  FDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPASQNP 120

Query: 121 SANA 124
           SANA
Sbjct: 121 SANA 124

BLAST of PI0024487 vs. NCBI nr
Match: XP_038885752.1 (uncharacterized protein LOC120076044 [Benincasa hispida])

HSP 1 Score: 199.1 bits (505), Expect = 2.2e-47
Identity = 109/127 (85.83%), Postives = 113/127 (88.98%), Query Frame = 0

Query: 1   MSFPIQQQSPPG--MQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGY 60
           MS PI+QQSPP   MQQNY GHPGSGSVGPVIGVL+VIIVFAVVAVVVGRLCSGRSIMGY
Sbjct: 1   MSLPIEQQSPPAAEMQQNYGGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGY 60

Query: 61  GHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGTMAVGTQQETK--QEEPAS 120
           GHFDLESWAETKCSSCIDGRI+PPPPRVD   AAA+SLPAGTMA   QQETK  QEEPAS
Sbjct: 61  GHFDLESWAETKCSSCIDGRISPPPPRVD-GCAAAASLPAGTMAARPQQETKQEQEEPAS 120

Query: 121 QNPSANA 124
           QNP ANA
Sbjct: 121 QNPPANA 126

BLAST of PI0024487 vs. NCBI nr
Match: KAG6598392.1 (hypothetical protein SDJN03_08170, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 185.3 bits (469), Expect = 3.2e-43
Identity = 102/125 (81.60%), Postives = 108/125 (86.40%), Query Frame = 0

Query: 1   MSFPIQQQSPP--GMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGY 60
           MS PI+QQSPP  GM   Y GHP SGSVGPVIGVL+VIIVFAVVAVVVGRLCSG SIMGY
Sbjct: 1   MSLPIEQQSPPATGMLPPYGGHPVSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGMSIMGY 60

Query: 61  GHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGTMAVGTQQETKQEEPASQN 120
           GHFDLESWAETKCSSCIDGRI+  PPRV+ S AA  SLP GTMAV TQQETKQEEPASQN
Sbjct: 61  GHFDLESWAETKCSSCIDGRISSTPPRVNVSPAA--SLPTGTMAVRTQQETKQEEPASQN 120

Query: 121 PSANA 124
           P+A+A
Sbjct: 121 PTASA 123

BLAST of PI0024487 vs. NCBI nr
Match: XP_022144319.1 (uncharacterized protein LOC111014030 [Momordica charantia])

HSP 1 Score: 184.9 bits (468), Expect = 4.2e-43
Identity = 97/123 (78.86%), Postives = 106/123 (86.18%), Query Frame = 0

Query: 1   MSFPIQQQSP--PGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGY 60
           MS PI+QQSP  PGMQQ Y GH  +GSVGPVIGVL+VIIVFAVVAVVVGRLCSG++IMGY
Sbjct: 1   MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGVLVVIIVFAVVAVVVGRLCSGKTIMGY 60

Query: 61  GHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGTMAVGTQQETKQEEPASQN 120
           GHFDLESWAETKCSSCIDGRI+PPPPR + S A  ++    TMAV TQQETKQEEPASQN
Sbjct: 61  GHFDLESWAETKCSSCIDGRISPPPPRANVSAATTATALPATMAVQTQQETKQEEPASQN 120

Query: 121 PSA 122
           PSA
Sbjct: 121 PSA 123

BLAST of PI0024487 vs. TAIR 10
Match: AT2G26520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57500.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 88.2 bits (217), Expect = 5.0e-18
Identity = 54/140 (38.57%), Postives = 80/140 (57.14%), Query Frame = 0

Query: 2   SFPIQQQSPPGMQ----QNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMG 61
           S P+  Q PP  +     + V   G+ ++GP I V IV+ V  V+A V+GRLCSG++I+G
Sbjct: 3   SMPLYWQPPPATEVSQDSSSVSSAGNSTIGPFIAVFIVVTVLCVLASVIGRLCSGKTILG 62

Query: 62  YGHFDLESWAETKCSSCIDGRITP--------PPPR--VDASTAAASSLPAGTMA----- 121
           YG +D+E WAE++C SCIDG I P        PPPR  +  +++  S+   G +A     
Sbjct: 63  YGDYDMERWAESRCGSCIDGHIHPHRPSPSPTPPPRQPLHHTSSGVSAESEGHVADLDHE 122

BLAST of PI0024487 vs. TAIR 10
Match: AT3G57500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G26520.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07
Identity = 35/81 (43.21%), Postives = 44/81 (54.32%), Query Frame = 0

Query: 25  SVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRI----- 84
           S+  ++ VL VI + +V+A V  RLC GR +   G  D+E W E KC SCID  I     
Sbjct: 37  SIETLVVVLAVITILSVLAGVFARLCGGRHLSHGGDHDIEGWVERKCRSCIDAGIPAVSA 96

Query: 85  --TPPPPRVDASTAAASSLPA 99
             +PPPP   A TA   S PA
Sbjct: 97  APSPPPPPPPA-TAEERSKPA 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V9H64.5e-5997.56Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A0A0LP671.9e-5797.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360640 PE=4 SV=1[more]
A0A6J1CRZ52.0e-4378.86uncharacterized protein LOC111014030 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6J1KK791.5e-3876.98uncharacterized protein LOC111496028 OS=Cucurbita maxima OX=3661 GN=LOC111496028... [more]
A0A6P4ABB21.1e-2556.80uncharacterized protein LOC107420905 OS=Ziziphus jujuba OX=326968 GN=LOC10742090... [more]
Match NameE-valueIdentityDescription
KAA0063096.19.4e-5997.56putative transmembrane protein [Cucumis melo var. makuwa][more]
XP_031737057.13.9e-5797.58uncharacterized protein LOC116402140 [Cucumis sativus] >KGN62547.1 hypothetical ... [more]
XP_038885752.12.2e-4785.83uncharacterized protein LOC120076044 [Benincasa hispida][more]
KAG6598392.13.2e-4381.60hypothetical protein SDJN03_08170, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022144319.14.2e-4378.86uncharacterized protein LOC111014030 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT2G26520.15.0e-1838.57unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G57500.11.0e-0743.21unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..123
NoneNo IPR availablePANTHERPTHR33429:SF24EXPRESSED PROTEINcoord: 1..122
NoneNo IPR availablePANTHERPTHR33429OS02G0708000 PROTEIN-RELATEDcoord: 1..122

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0024487.1PI0024487.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane