PI0024350 (gene) Melon (PI 482460) v1

Overview


Name	PI0024350
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Stress response protein NST1-like
Location	chr07: 14304076 .. 14304504 (-)
RNA-Seq Expression	PI0024350
Synteny	PI0024350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCGATAAAAACTGTCCTGAAGAGGAAGCAAGAGAAGAAGCAAATGCTAGCAGAACTGGGCGAGCAAGTTGAGGAACTCACTGCGAAGTGCAAGGCACTGGGAGTAGAGAAAGACAAACTCGAAGTCATAGTTGAGGAATTCGAGGATGAGCTGGAGGTGATGAGCCCAATTGATCAGGGGCCACCGGCTAAGAAACAAAAGGACGTCTTCAGACCATCCAAAGGAAAAAAGAAAGTTGGGGAATATGGACCTGAAGAGCCCCCAGCAAGCAGCGAAGCCAAAACGAAAGCGCCCTCAATTCACACCATCATAAAAATGGAGAAATGGCTTTTTCCATTTAATGACACCCTTCCAGACTGCCTCTACGCGCCAATCCAGGCATTTGGATGGAAGAAATTTTTTAAAGAGCACACCAAGTTGTGA

mRNA sequence

ATGGAGGCGATAAAAACTGTCCTGAAGAGGAAGCAAGAGAAGAAGCAAATGCTAGCAGAACTGGGCGAGCAAGTTGAGGAACTCACTGCGAAGTGCAAGGCACTGGGAGTAGAGAAAGACAAACTCGAAGTCATAGTTGAGGAATTCGAGGATGAGCTGGAGGTGATGAGCCCAATTGATCAGGGGCCACCGGCTAAGAAACAAAAGGACGTCTTCAGACCATCCAAAGGAAAAAAGAAAGTTGGGGAATATGGACCTGAAGAGCCCCCAGCAAGCAGCGAAGCCAAAACGAAAGCGCCCTCAATTCACACCATCATAAAAATGGAGAAATGGCTTTTTCCATTTAATGACACCCTTCCAGACTGCCTCTACGCGCCAATCCAGGCATTTGGATGGAAGAAATTTTTTAAAGAGCACACCAAGTTGTGA

Coding sequence (CDS)

ATGGAGGCGATAAAAACTGTCCTGAAGAGGAAGCAAGAGAAGAAGCAAATGCTAGCAGAACTGGGCGAGCAAGTTGAGGAACTCACTGCGAAGTGCAAGGCACTGGGAGTAGAGAAAGACAAACTCGAAGTCATAGTTGAGGAATTCGAGGATGAGCTGGAGGTGATGAGCCCAATTGATCAGGGGCCACCGGCTAAGAAACAAAAGGACGTCTTCAGACCATCCAAAGGAAAAAAGAAAGTTGGGGAATATGGACCTGAAGAGCCCCCAGCAAGCAGCGAAGCCAAAACGAAAGCGCCCTCAATTCACACCATCATAAAAATGGAGAAATGGCTTTTTCCATTTAATGACACCCTTCCAGACTGCCTCTACGCGCCAATCCAGGCATTTGGATGGAAGAAATTTTTTAAAGAGCACACCAAGTTGTGA

Protein sequence

MEAIKTVLKRKQEKKQMLAELGEQVEELTAKCKALGVEKDKLEVIVEEFEDELEVMSPIDQGPPAKKQKDVFRPSKGKKKVGEYGPEEPPASSEAKTKAPSIHTIIKMEKWLFPFNDTLPDCLYAPIQAFGWKKFFKEHTKL

Homology

[Close]

BLAST of PI0024350 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.0e-09
Identity = 57/144 (39.58%), Postives = 81/144 (56.25%), Query Frame = 0


Query: 4   IKTVLKRKQEKKQMLAELGEQVEELTAKCK-ALGVEKDKLEVIVEEFEDELEVMSPIDQG 63
           I+T  K+KQE    LA L EQVE +  + K A   E D+++V+VEEF  E+E MSP+   
Sbjct: 159 IQTTKKKKQE---TLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPR 218

Query: 64  P-PAKK---QKDVFRPSKGKKKVGEYGPEEPPASSEAKTKAPSIHTIIKMEKWLFPFNDT 123
           P P +K     +  + SK K+K G   P++    +  K  A  +  +IK+EK L PFND 
Sbjct: 219 PRPEEKGLTNIEFPKKSKSKRKAGTSRPKDIQRGN--KMSAQKLDKLIKIEKGLLPFNDP 278

Query: 124 LPDCLYAPIQAFGWKKFFKEHTKL 143
           L + LY  I+    +KFF E TK+
Sbjct: 279 LLNFLYGLIKTMKLEKFFIEETKV 297

[Close]

BLAST of PI0024350 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.0e-09
Identity = 57/144 (39.58%), Postives = 81/144 (56.25%), Query Frame = 0


Query: 4   IKTVLKRKQEKKQMLAELGEQVEELTAKCK-ALGVEKDKLEVIVEEFEDELEVMSPIDQG 63
           I+T  K+KQE    LA L EQVE +  + K A   E D+++V+VEEF  E+E MSP+   
Sbjct: 128 IQTTKKKKQE---TLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPR 187

Query: 64  P-PAKK---QKDVFRPSKGKKKVGEYGPEEPPASSEAKTKAPSIHTIIKMEKWLFPFNDT 123
           P P +K     +  + SK K+K G   P++    +  K  A  +  +IK+EK L PFND 
Sbjct: 188 PRPEEKGLTNIEFPKKSKSKRKAGTSRPKDIQRGN--KMSAQKLDKLIKIEKGLLPFNDP 247

Query: 124 LPDCLYAPIQAFGWKKFFKEHTKL 143
           L + LY  I+    +KFF E TK+
Sbjct: 248 LLNFLYGLIKTMKLEKFFIEETKV 266

[Close]

BLAST of PI0024350 vs. ExPASy TrEMBL
Match: A0A5A7UQ22 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1312G00140 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.4e-05
Identity = 36/85 (42.35%), Postives = 46/85 (54.12%), Query Frame = 0


Query: 56  MSPIDQGPPAKKQKDVF------RPSKGKKKVGEYGPEEPPASSEAKTKAPSIHTIIKME 115
           MSP++   P  + K+V       RP K K KVG   P +    S  K  A  +  +IK+E
Sbjct: 1   MSPLE---PRLRPKEVLGLVNVQRPKKSKSKVGTSKPNDVQKGS--KKSAEDLDKLIKIE 60

Query: 116 KWLFPFNDTLPDCLYAPIQAFGWKK 135
           K L PFND LP+ LY PI+A  WKK
Sbjct: 61  KRLLPFNDHLPNFLYGPIKALKWKK 80

[Close]

BLAST of PI0024350 vs. ExPASy TrEMBL
Match: A0A5D3BEA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00170 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.2e-04
Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 73  RPSKGKKKVGEYGPEEPPASSEAKTKAP-SIHTIIKMEKWLFPFNDTLPDCLYAPIQAFG 132
           R  + K K  E  P +   +     K P  I  +IK+EK LFPFN+ LP+ +++ I+AFG
Sbjct: 16  RTIETKAKKSEVEPSKLEEAQRGGEKRPQGIDKLIKVEKGLFPFNEALPNFIFSSIKAFG 75

Query: 133 WKKFFKEHTK 142
           W KFF   TK
Sbjct: 76  WNKFFTGETK 85

[Close]

BLAST of PI0024350 vs. ExPASy TrEMBL
Match: A0A5A7UFG4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00220 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 6.3e-04
Identity = 29/75 (38.67%), Postives = 42/75 (56.00%), Query Frame = 0


Query: 68  QKDVFRPSKGKKKVGEYGPEEPPASSEAKTKAP-SIHTIIKMEKWLFPFNDTLPDCLYAP 127
           ++   R  + K K  E  P +   +     K P  I  +IK+EK LFPFN+ LP+ +++ 
Sbjct: 11  EEQCMRTIETKAKKIEVEPSKLKEAQRGGEKRPQGIDKLIKVEKGLFPFNEALPNFIFSS 70

Query: 128 IQAFGWKKFFKEHTK 142
           I+AFGW KFF   TK
Sbjct: 71  IKAFGWTKFFTGKTK 85

[Close]

BLAST of PI0024350 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-09
Identity = 57/144 (39.58%), Postives = 81/144 (56.25%), Query Frame = 0


Query: 4   IKTVLKRKQEKKQMLAELGEQVEELTAKCK-ALGVEKDKLEVIVEEFEDELEVMSPIDQG 63
           I+T  K+KQE    LA L EQVE +  + K A   E D+++V+VEEF  E+E MSP+   
Sbjct: 128 IQTTKKKKQE---TLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPR 187

Query: 64  P-PAKK---QKDVFRPSKGKKKVGEYGPEEPPASSEAKTKAPSIHTIIKMEKWLFPFNDT 123
           P P +K     +  + SK K+K G   P++    +  K  A  +  +IK+EK L PFND 
Sbjct: 188 PRPEEKGLTNIEFPKKSKSKRKAGTSRPKDIQRGN--KMSAQKLDKLIKIEKGLLPFNDP 247

Query: 124 LPDCLYAPIQAFGWKKFFKEHTKL 143
           L + LY  I+    +KFF E TK+
Sbjct: 248 LLNFLYGLIKTMKLEKFFIEETKV 266

[Close]

BLAST of PI0024350 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-09
Identity = 57/144 (39.58%), Postives = 81/144 (56.25%), Query Frame = 0


Query: 4   IKTVLKRKQEKKQMLAELGEQVEELTAKCK-ALGVEKDKLEVIVEEFEDELEVMSPIDQG 63
           I+T  K+KQE    LA L EQVE +  + K A   E D+++V+VEEF  E+E MSP+   
Sbjct: 159 IQTTKKKKQE---TLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPR 218

Query: 64  P-PAKK---QKDVFRPSKGKKKVGEYGPEEPPASSEAKTKAPSIHTIIKMEKWLFPFNDT 123
           P P +K     +  + SK K+K G   P++    +  K  A  +  +IK+EK L PFND 
Sbjct: 219 PRPEEKGLTNIEFPKKSKSKRKAGTSRPKDIQRGN--KMSAQKLDKLIKIEKGLLPFNDP 278

Query: 124 LPDCLYAPIQAFGWKKFFKEHTKL 143
           L + LY  I+    +KFF E TK+
Sbjct: 279 LLNFLYGLIKTMKLEKFFIEETKV 297

[Close]

BLAST of PI0024350 vs. NCBI nr
Match: KAA0056727.1 (hypothetical protein E6C27_scaffold29G00210 [Cucumis melo var. makuwa] >TYK21191.1 hypothetical protein E5676_scaffold1312G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 9.0e-05
Identity = 36/85 (42.35%), Postives = 46/85 (54.12%), Query Frame = 0


Query: 56  MSPIDQGPPAKKQKDVF------RPSKGKKKVGEYGPEEPPASSEAKTKAPSIHTIIKME 115
           MSP++   P  + K+V       RP K K KVG   P +    S  K  A  +  +IK+E
Sbjct: 1   MSPLE---PRLRPKEVLGLVNVQRPKKSKSKVGTSKPNDVQKGS--KKSAEDLDKLIKIE 60

Query: 116 KWLFPFNDTLPDCLYAPIQAFGWKK 135
           K L PFND LP+ LY PI+A  WKK
Sbjct: 61  KRLLPFNDHLPNFLYGPIKALKWKK 80

[Close]

BLAST of PI0024350 vs. NCBI nr
Match: TYJ97633.1 (hypothetical protein E5676_scaffold469G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 55.5 bits (132), Expect = 4.5e-04
Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 73  RPSKGKKKVGEYGPEEPPASSEAKTKAP-SIHTIIKMEKWLFPFNDTLPDCLYAPIQAFG 132
           R  + K K  E  P +   +     K P  I  +IK+EK LFPFN+ LP+ +++ I+AFG
Sbjct: 16  RTIETKAKKSEVEPSKLEEAQRGGEKRPQGIDKLIKVEKGLFPFNEALPNFIFSSIKAFG 75

Query: 133 WKKFFKEHTK 142
           W KFF   TK
Sbjct: 76  WNKFFTGETK 85

The following BLAST results are available for this feature:

BLAST of PI0024350 vs.


Match Name	E-value	Identity	Description

BLAST of PI0024350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TBU7	1.0e-09	39.58	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DQE7	1.0e-09	39.58	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7UQ22	4.4e-05	42.35	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BEA4	2.2e-04	41.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UFG4	6.3e-04	38.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0024350 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK25768.1	2.1e-09	39.58	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0038829.1	2.1e-09	39.58	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0056727.1	9.0e-05	42.35	hypothetical protein E6C27_scaffold29G00210 [Cucumis melo var. makuwa] >TYK21191...	[more]
TYJ97633.1	4.5e-04	41.43	hypothetical protein E5676_scaffold469G00170 [Cucumis melo var. makuwa]	[more]

BLAST of PI0024350 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024350.1	PI0024350.1	mRNA