PI0024246 (gene) Melon (PI 482460) v1

Overview


Name	PI0024246
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DUF4216 domain-containing protein
Location	chr07: 15336737 .. 15338415 (+)
RNA-Seq Expression	PI0024246
Synteny	PI0024246

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTGGATGAGAATATCTCAACGTATGTACAATTAGATTGTGAAGGCACATGGATACCTACTTAATATTATAGTGGTTTGTTTTCAAATTTTTGATTAATAATACCTTAAGTTTATCATGTACATTCATCCCATTTCGAATTTTTATTGCATAAAACTTATATTATGCTAATTGTTTCTTGATTTTGATTGACAGTCTTCGATTCGTACGTCACATAGACGATTTTAATGAAGAACTTGGTAATAGTGAGTTGAATGCAACACTTGGAATTGAGGATGAAAAAGAAAAGTTTGGTATTGCAAATGAAACCCCCACACGGGAAAAGAGACCACGAGAGCCAACTATTATGTTCGATGTAACTCGCATTAGAAGTTTGGAAGATAAAAAGGTGGTGAGGTACAATGAATACGGAGTACCGATTGGTGAGAATTGAGTGAAGTTGAAGTCTTTTATAGGGTCTTCAACACATTATCATGTCCCTATCACATATAAGTCTTGGAAAAGTGTGCCTGCAGAACTGAAAGATGAGAGTACAGTTGAGGTATATATAATTTTCATTTGTTTATCTTAATAATGTTCTTGACGTATGTACGCATTACTGAGTACTTTTAAATATTTAGGCCGCATTTGTTATAGATCCAAGATCTAGGAAAAATATTCTCCAAATTGCAGGCATTTCATTTCGTCAGTTTAAGAACTGACTAGCGACGAAATACATTATGCCACATAATGACGAACCGCAACTCCTACAAGTTCCACCAGAAAAGTATATATTTATTCATCAAAATCATTGGGAAGAATTTGTGAGGTCAAGATTACGTGAGACTTTTCAGGTATGAACAACGTTTTCATGTTAGATAGTTTAATATTTGTAACTTTCTCACTAACACTTTCTACATATGAATATAGGAAAAAAGACGATTGAAACAAGATTGACGATCTAAGAACAAGTACAACCGTAGAATTTTGAGGAAAGGTTATGCCAATCTTATTGAGGAAATGGTAAGAATTAGTTTATGTCTCACAATTGTTAAGTTTATGATAATACCAAACTTTTTTGTTCATTGGAATTTAAAAGAATGAGGGTTCAAATGAATATGGTTTCGATCGAGCCAACATGTGGAAGAAGACTCGAGATAATAAACAAGGAGAGTATGACAATGACGATGTTCAGCAAGTCGTCCATTAAATAGTAAGACTACATGTAAATTACACATTTAAATTAACCATACATAAGCATTTCTATAACTTATATTAATTTTGCTATCTTTTTAGGATGAGATCTCAATGAATACGGATCCATCGTCCCTTAAAGCACTATCTTCTAATGATGTCTTAACTCAAGCATTGGGTACGAAAGAGCATCATGGTCGTGTACGTGGCGTCGGTGGGTATGTTACTCCTATGACTTACTTTCATTTATTGAAAAGACATCAGAAAGTGAGAACGAAATTCTACTTGAGAATGAAGAACTTTAGAAGCGCGTTAGCGAATTGGAAGCACGTATTCAAAATAATTTGTCTATTCCATTATCTAGACAAGGAAGTTGTTCGAAGGAAAATTTGTTGGAGGAGATTAAGTTGAAAAAGATAATGAAAGAGAAGAGTAAGTTGAAGGAGGATGAGAAACTGAAAGAGAAGATGAAGAGGAAGGAGAATGAACCTAAAGGGAAATAG

mRNA sequence

ATGGCTTGGATGAGAATATCTCAACGGTCTTCAACACATTATCATGTCCCTATCACATATAAGTCTTGGAAAAGTGTGCCTGCAGAACTGAAAGATGAGAGTACAGTTGAGGATGAGATCTCAATGAATACGGATCCATCGTCCCTTAAAGCACTATCTTCTAATGATGTCTTAACTCAAGCATTGGGTACGAAAGAGCATCATGGTCGTGTACGTGGCGTCGGTGGACAAGGAAGTTGTTCGAAGGAAAATTTGTTGGAGGAGATTAAGTTGAAAAAGATAATGAAAGAGAAGAGTAAGTTGAAGGAGGATGAGAAACTGAAAGAGAAGATGAAGAGGAAGGAGAATGAACCTAAAGGGAAATAG

Coding sequence (CDS)

ATGGCTTGGATGAGAATATCTCAACGGTCTTCAACACATTATCATGTCCCTATCACATATAAGTCTTGGAAAAGTGTGCCTGCAGAACTGAAAGATGAGAGTACAGTTGAGGATGAGATCTCAATGAATACGGATCCATCGTCCCTTAAAGCACTATCTTCTAATGATGTCTTAACTCAAGCATTGGGTACGAAAGAGCATCATGGTCGTGTACGTGGCGTCGGTGGACAAGGAAGTTGTTCGAAGGAAAATTTGTTGGAGGAGATTAAGTTGAAAAAGATAATGAAAGAGAAGAGTAAGTTGAAGGAGGATGAGAAACTGAAAGAGAAGATGAAGAGGAAGGAGAATGAACCTAAAGGGAAATAG

Protein sequence

MAWMRISQRSSTHYHVPITYKSWKSVPAELKDESTVEDEISMNTDPSSLKALSSNDVLTQALGTKEHHGRVRGVGGQGSCSKENLLEEIKLKKIMKEKSKLKEDEKLKEKMKRKENEPKGK

Homology

[Close]

BLAST of PI0024246 vs. ExPASy TrEMBL
Match: A0A5A7TU35 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001260 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 6.3e-13
Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 10  SSTHYHVPITYKSWKSVPAELKDE--STVEDEISMNTDPSSLKALSSNDVLTQALGTKEH 69
           S+THYHVP+TY SWKSVP ELKD+  +TVEDEISMNTD SS+    S    TQALGTKEH
Sbjct: 261 SATHYHVPVTYTSWKSVPIELKDKIFTTVEDEISMNTDSSSVNRYYS----TQALGTKEH 320

Query: 70  HGRVRGVGGQGSCSKENLLEEIKLKKIMKEKSKLKEDEKLKEKMKRKE 116
           +GRVRGVGG    +       +K K    E + L E+E+L+ ++   E
Sbjct: 321 NGRVRGVGGY--VTPTAYFHSVK-KTSKDEANILVENEELRRRVSELE 361

[Close]

BLAST of PI0024246 vs. ExPASy TrEMBL
Match: A0A5A7TY61 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G001500 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.1e-12
Identity = 57/108 (52.78%), Postives = 73/108 (67.59%), Query Frame = 0


Query: 10  SSTHYHVPITYKSWKSVPAELKDE--STVEDEISMNTDPSSLKALSSNDVLTQALGTKEH 69
           S+THYHVP    SWKSVPAE+KD+  +TVEDEISMNTD SS+    SN+VLTQALGTKEH
Sbjct: 76  SATHYHVP---SSWKSVPAEMKDKIFTTVEDEISMNTDSSSVNRHYSNNVLTQALGTKEH 135

Query: 70  HGRVRGVGGQGSCSKENLLEEIKLKKIMKEKSKLKEDEKLKEKMKRKE 116
           +GRV  VGG  + +       +K K    E + L E+E+L+ ++   E
Sbjct: 136 NGRVHRVGGYVTLT--TYFHSVK-KTSKDEANILVENEELRRRVSELE 177

[Close]

BLAST of PI0024246 vs. ExPASy TrEMBL
Match: A0A5A7T7N8 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G003040 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 5.0e-10
Identity = 62/146 (42.47%), Postives = 78/146 (53.42%), Query Frame = 0


Query: 10  SSTHYHVPITYKSWKSVPAELKDE--STVEDE---------------------------- 69
           S+THYHVPITY SWKSVPAELKD+  +TVE E                            
Sbjct: 76  SATHYHVPITYTSWKSVPAELKDKIFTTVEKEGSNEVDHVDRAKMWKKARVNKQRQYDND 135

Query: 70  ---------ISMNTDPSSLKALSSNDVLTQALGTKEHHGRVRGVGGQGSCSKENLLEEIK 116
                    I MNTD SS+    SNDVL QALGTKEH+GRVRGVGG  + +    L    
Sbjct: 136 DIQQIVHKIILMNTDSSSVNRHYSNDVLIQALGTKEHNGRVRGVGGYVTPTTYFHL---- 195

[Close]

BLAST of PI0024246 vs. ExPASy TrEMBL
Match: A0A5A7SRY6 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1276G00270 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 5.0e-10
Identity = 73/193 (37.82%), Postives = 82/193 (42.49%), Query Frame = 0


Query: 10  SSTHYHVPITYKSWKSVPAELKDE--STVE------------------------------ 69
           S+THYHVPITY SWKSVP ELKD+  +TVE                              
Sbjct: 70  SATHYHVPITYMSWKSVPVELKDKIFTTVEAAFVIDPRFRKNVLQTAVPPEKYSFIEQNH 129

Query: 70  ---------------------------------------------DEISMNTDPSSLKAL 122
                                                        DEISMNTD SS+   
Sbjct: 130 WEEFVRSRLSETFQEKRKLQQDRRSKNKYYHRISRKGYANLKEKMDEISMNTDSSSVNRH 189

[Close]

BLAST of PI0024246 vs. ExPASy TrEMBL
Match: A0A5A7VET0 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001170 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.6e-08
Identity = 69/205 (33.66%), Postives = 80/205 (39.02%), Query Frame = 0


Query: 9   RSSTHYHVPITYKSWKSVPAELKDE----------------------------------- 68
           RS+T+YHVPITY SWKSVP ELKD+                                   
Sbjct: 406 RSATYYHVPITYTSWKSVPTELKDKIFTTVEAAFIIDPRSRKNVLQTAGISFRQFKNWLT 465

Query: 69  --------------------------------------STVEDEISMNTDPSSLKALSSN 122
                                                  T +DEISMN D SS+    SN
Sbjct: 466 TKFIIPHKDEPQLLQVPPEKNSFIEQNHWEEFVRSRLSKTFQDEISMNIDSSSVNRHYSN 525

[Close]

BLAST of PI0024246 vs. NCBI nr
Match: KAA0045347.1 (hypothetical protein E6C27_scaffold316G001260 [Cucumis melo var. makuwa])

HSP 1 Score: 83.6 bits (205), Expect = 1.3e-12
Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 10  SSTHYHVPITYKSWKSVPAELKDE--STVEDEISMNTDPSSLKALSSNDVLTQALGTKEH 69
           S+THYHVP+TY SWKSVP ELKD+  +TVEDEISMNTD SS+    S    TQALGTKEH
Sbjct: 261 SATHYHVPVTYTSWKSVPIELKDKIFTTVEDEISMNTDSSSVNRYYS----TQALGTKEH 320

Query: 70  HGRVRGVGGQGSCSKENLLEEIKLKKIMKEKSKLKEDEKLKEKMKRKE 116
           +GRVRGVGG    +       +K K    E + L E+E+L+ ++   E
Sbjct: 321 NGRVRGVGGY--VTPTAYFHSVK-KTSKDEANILVENEELRRRVSELE 361

[Close]

BLAST of PI0024246 vs. NCBI nr
Match: KAA0046847.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 8.5e-12
Identity = 57/108 (52.78%), Postives = 73/108 (67.59%), Query Frame = 0


Query: 10  SSTHYHVPITYKSWKSVPAELKDE--STVEDEISMNTDPSSLKALSSNDVLTQALGTKEH 69
           S+THYHVP    SWKSVPAE+KD+  +TVEDEISMNTD SS+    SN+VLTQALGTKEH
Sbjct: 76  SATHYHVP---SSWKSVPAEMKDKIFTTVEDEISMNTDSSSVNRHYSNNVLTQALGTKEH 135

Query: 70  HGRVRGVGGQGSCSKENLLEEIKLKKIMKEKSKLKEDEKLKEKMKRKE 116
           +GRV  VGG  + +       +K K    E + L E+E+L+ ++   E
Sbjct: 136 NGRVHRVGGYVTLT--TYFHSVK-KTSKDEANILVENEELRRRVSELE 177

[Close]

BLAST of PI0024246 vs. NCBI nr
Match: KAA0039484.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 73.9 bits (180), Expect = 1.0e-09
Identity = 62/146 (42.47%), Postives = 78/146 (53.42%), Query Frame = 0


Query: 10  SSTHYHVPITYKSWKSVPAELKDE--STVEDE---------------------------- 69
           S+THYHVPITY SWKSVPAELKD+  +TVE E                            
Sbjct: 76  SATHYHVPITYTSWKSVPAELKDKIFTTVEKEGSNEVDHVDRAKMWKKARVNKQRQYDND 135

Query: 70  ---------ISMNTDPSSLKALSSNDVLTQALGTKEHHGRVRGVGGQGSCSKENLLEEIK 116
                    I MNTD SS+    SNDVL QALGTKEH+GRVRGVGG  + +    L    
Sbjct: 136 DIQQIVHKIILMNTDSSSVNRHYSNDVLIQALGTKEHNGRVRGVGGYVTPTTYFHL---- 195

[Close]

BLAST of PI0024246 vs. NCBI nr
Match: KAA0033183.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 73.9 bits (180), Expect = 1.0e-09
Identity = 73/193 (37.82%), Postives = 82/193 (42.49%), Query Frame = 0


Query: 10  SSTHYHVPITYKSWKSVPAELKDE--STVE------------------------------ 69
           S+THYHVPITY SWKSVP ELKD+  +TVE                              
Sbjct: 70  SATHYHVPITYMSWKSVPVELKDKIFTTVEAAFVIDPRFRKNVLQTAVPPEKYSFIEQNH 129

Query: 70  ---------------------------------------------DEISMNTDPSSLKAL 122
                                                        DEISMNTD SS+   
Sbjct: 130 WEEFVRSRLSETFQEKRKLQQDRRSKNKYYHRISRKGYANLKEKMDEISMNTDSSSVNRH 189

[Close]

BLAST of PI0024246 vs. NCBI nr
Match: KAA0064039.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] >TYK26190.1 putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 67.8 bits (164), Expect = 7.4e-08
Identity = 69/205 (33.66%), Postives = 80/205 (39.02%), Query Frame = 0


Query: 9   RSSTHYHVPITYKSWKSVPAELKDE----------------------------------- 68
           RS+T+YHVPITY SWKSVP ELKD+                                   
Sbjct: 406 RSATYYHVPITYTSWKSVPTELKDKIFTTVEAAFIIDPRSRKNVLQTAGISFRQFKNWLT 465

Query: 69  --------------------------------------STVEDEISMNTDPSSLKALSSN 122
                                                  T +DEISMN D SS+    SN
Sbjct: 466 TKFIIPHKDEPQLLQVPPEKNSFIEQNHWEEFVRSRLSKTFQDEISMNIDSSSVNRHYSN 525

The following BLAST results are available for this feature:

BLAST of PI0024246 vs.


Match Name	E-value	Identity	Description

BLAST of PI0024246 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TU35	6.3e-13	53.70	DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7TY61	4.1e-12	52.78	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7T7N8	5.0e-10	42.47	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7SRY6	5.0e-10	37.82	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7VET0	3.6e-08	33.66	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of PI0024246 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045347.1	1.3e-12	53.70	hypothetical protein E6C27_scaffold316G001260 [Cucumis melo var. makuwa]	[more]
KAA0046847.1	8.5e-12	52.78	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]
KAA0039484.1	1.0e-09	42.47	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]
KAA0033183.1	1.0e-09	37.82	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]
KAA0064039.1	7.4e-08	33.66	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] >TYK261...	[more]

BLAST of PI0024246 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024246.1	PI0024246.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity