PI0024150 (gene) Melon (PI 482460) v1

Overview


Name	PI0024150
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	SWIB domain-containing protein
Location	chr07: 5850869 .. 5854213 (-)
RNA-Seq Expression	PI0024150
Synteny	PI0024150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCCTTCCAAGATCAGTGCCAGCGCTCGTCTTCTAACCCAAAAAATTCAACTGAAATCTCATCTCTGCAAGTTCCTCGGCATTCCTCTTGTCTCTCCCCGCGGCGATATTCCCATCCTGATTTCCAGGTTCCTCAAGCTCTATCGACCTCAGGTCTCTCTCATGATTTTCCAAAAAAAAAAAAAATAATAATAATAATAATTTAAGCTATTTCAGCAACGATTTCCATTTCTTCAAGTTTTCGAGCTGAGGTTATAATGTAGTGATTTAGATTGAGTAAATTAGATTCAATTTTTTAGTTTTTAACACTAGTTTCTACCTTCTGCTTCCCGTTCTTTATGAACACACTCTTTTTCTCTTACTGATGTGTAAATATCACTGCTGTTATTGCTTGTTTTTAAACTTGTCTTTGATCATGTAATCTGTTGTCTTGATGTTAATGCATCACCACTTTGATAACTTATATTCTACTTCATTTTATTGTTGTTGTCTTATCTACTGCCCTCTTTTAGCTATTGCCTTAATGTAAATCTTTATTCACATGTTATATTGTCTTATCAGATTAATTAAATTAAAATTCTTTGCTAATAAGGGATCGGTTCGCTTTATTCCTGTTCCCACTACCTTAGTATTTGTATCACACTGCTTTAAGATGCGACAATTGAGGAGATTTATTTATATCTCCTATCTTAGTGAATGAGGATCAAGTGGAGAGGGACAAGTTGGTTGAGAGTGATTGGGAAGATGATGATATTCCAATTTTAATGTTGAACTATGTTGTGGGACAACTTTTAAGCCTTTAAGATTAATGTTTAGTGGAAGATGGTTTTTGTATTGTACTTCAGAAAGGAAAGGGAGAATGTGATTGCATTTGCAGTGCAGAAATTAACAAATGCCTATTGGAGAAGTAAAAATGCTTTATTAACTTGGTGGTTAGTTTGTTTGAACAGATGATTTTCTGTGTATTTGGATTACTGAAAAATAAAGAAAGTATTACTTAAGAATGAGAGGTGCAGAGAGATAGAAGAGGAGAGAAGTTTAGTTAGATTCAAACTCCCTAAATAACTCAAACTGTGTGGAAGCAATCCTACAATTAAATGGATGTTTGCTGTAAATTATGGGCATGCCCCTCAAACACTGAAATTAATACTCATGATGCCTTTTACTTTTTAGTTATCGGGGAAAATGTTCTAGATTTCATCCTTCAAATAAAATTTTCTCAACTAAACTTTTGTTTCCAATCAACTTTGCTTAGCCTTACATTCATTTTAGATTTTGTTTGTTCACTAAAAGGTAGAATTCAGAAGTATTTGCTTGCTTGTGTATTTCTTTTTGAGATGGGATGGTTGATGTGCTTAAAAGTTCTTTGGTTTGTAGAGCCCTGGGATCAGAAAGGACAAGATATGGGAGGAAAACTTAAAAGCCATATTACATGGTAAAGACGGAGTCGGGATAGCAGAGATTAACAAAATTCTCTCTCCCCAATTCAATGATCCAAGTCTAAGAAATAAGGAAATGGAACGTCAGAAAGATAACAGGTCAACAAGGATTTACCTTGTTTTTCCATTGTTCTTTATATTTTTATGTCACACTTAAAATCACTGGATCTATTTCCATATCATAAATGGCTAAATCAAAATTCCTCTTCACCAATGTTCATCAATTTCATTCATCGTTGCTCTTTTTCTTTCCTAAATTATGTCTATGCTAAACTTTGTTCTATATAAACATCATTTTCTTTTTTCCTTTTCCTACATGTTAGGCATGACAGCAGATGAGGACAAAGTGGATAAGCTCTGACCGATGACCATTTTTTGGTAACATCTTTTTATTTTTCTATACCTCTTCAAAAACCTCGTGATTTTCATTTTTTGATCTTGCTTGTTAGTTTGTTCAATATACTGCGGCAAAAGTGTGCCTTTTCGTTCTTCTTGACATCTTTTTTTCAAGTGCGTTTGAAGGTTGTTCTGACCTGAAAATTAAGCGTACTTTTGCTGAATCTGTAAGAATAGATTATCGTCCCTTTACTTTTACGTTATGGCATCTACTGATCTGACTTGAAATTTAGCATTTGCACTCGTGATGTCCATAATCTATCTGGATTCTCTCCGGTGTCTTTTAGGCCCCACATATCTACTTATTTTTCTTTTAATTGGACAATCTAGGTTTATTTTTAATGCAACTTTTCTTAGAAAAATAAAAAAGTGGAATGAAGAACCCATTAAGACTGGGCGGTCTAAATTTAACCCGAGATACTACTGCAGAGAATCCAGGCCCCATGTTTCATTATATTTCTATGGTTCCACTGTTCTAAAGCTTCTACTTTTAGGTTCTTTTTGTTTTCCCTCTGAAATGACTTTTGAGGGTATTGAATTAAATTTTTTTGGTATGCACAAGTGTTGAATATATACACAGAACGTTCTCTAGGCGGTGTTTGGCTTAGGATTTAATACGTCTTGGGTTAAGAAATTTGGATTTGTGTTACATATGTTTGGGTTGTAAGAAGGAATAAGTTATAGAAACTTGGTTTCGTGTCACACGTGTTTGGTTCATGAGTTTCTAATTTGGAAAGAGATTTTAGAGACTTCTTAGTTGGAAATCACTCATCTTTTGTGACAATGTAGACGGGAATTTTTTAATATTGGTTATACATCCTAAATCTGTTTCTTCTTGGTTGGGGATTCACACTAAATAAGGTGAAAGCTGCTCTAAACTGCCCTCAACCCAGAAAAAATAGATTTATTTTGATCGAAACAAATTTAGGATGTATCAGCTAACAACAACCAATTGTTGTATAGGGATTTGCTTGGAGAAATTTTTACAGCAAAAGCCTAGTTGCTAGCAATTACTTTAGAAGCTACAACAAAACGATCTCAAATTTAACCTAGGTTAGATAGGTAAATGAACAACTCCACTTCTTTGTTCTTTCAAATACTGGGAGATTAGGCTGTCCTGAATAATTATTTTTCTCACATCTTTGTTAGATGAGTAAGGCTCATCCAAGCTTGAATGAATAATCCCAAATGTTGAGCACTTTAAAGTTAAACTCTTTCAAGGTCCAGTATAGTTTTGTCATCTGGAGTTATTGTTGAAAATGAAACTTAATCTACAATATATTGTAGGCATCAATTTGGACGAAACTTTCTCTAATCAATTCCTTGTTCTAACATTCCCGATCCATCATAAAAAATATTACATCTCTCCTTTAAAGTTTCATGAACCTTGATGGTTTTTTAAGAGTCATCTGCTATATTTGTGTTAGCATGTCGTTGCAAATCCTTTCTGGAAAAGTTGTCTCGCAGCACTCTCCAAACTCGCTCCTTGATAAAATTAAATACTTAG

mRNA sequence

ATGCCTCCTTCCAAGATCAGTGCCAGCGCTCGTCTTCTAACCCAAAAAATTCAACTGAAATCTCATCTCTGCAAGTTCCTCGGCATTCCTCTTGTCTCTCCCCGCGGCGATATTCCCATCCTGATTTCCAGGTTCCTCAAGCTCTATCGACCTCAGAGCCCTGGGATCAGAAAGGACAAGATATGGGAGGAAAACTTAAAAGCCATATTACATGGTAAAGACGGAGTCGGGATAGCAGAGATTAACAAAATTCTCTCTCCCCAATTCAATGATCCAAGTCTAAGAAATAAGGAAATGGAACGTCAGAAAGATAACAGAAAAATAAAAAAGTGGAATGAAGAACCCATTAAGACTGGGCGGTCTAAATTTAACCCGAGATACTACTGCAGAGAATCCAGGCCCCATGTTTCATTATATTTCTATGGTTCCACTGTTCTAAAGCTTCTACTTTTAGAGTCATCTGCTATATTTGTGTTAGCATGTCGTTGCAAATCCTTTCTGGAAAAGTTGTCTCGCAGCACTCTCCAAACTCGCTCCTTGATAAAATTAAATACTTAG

Coding sequence (CDS)

ATGCCTCCTTCCAAGATCAGTGCCAGCGCTCGTCTTCTAACCCAAAAAATTCAACTGAAATCTCATCTCTGCAAGTTCCTCGGCATTCCTCTTGTCTCTCCCCGCGGCGATATTCCCATCCTGATTTCCAGGTTCCTCAAGCTCTATCGACCTCAGAGCCCTGGGATCAGAAAGGACAAGATATGGGAGGAAAACTTAAAAGCCATATTACATGGTAAAGACGGAGTCGGGATAGCAGAGATTAACAAAATTCTCTCTCCCCAATTCAATGATCCAAGTCTAAGAAATAAGGAAATGGAACGTCAGAAAGATAACAGAAAAATAAAAAAGTGGAATGAAGAACCCATTAAGACTGGGCGGTCTAAATTTAACCCGAGATACTACTGCAGAGAATCCAGGCCCCATGTTTCATTATATTTCTATGGTTCCACTGTTCTAAAGCTTCTACTTTTAGAGTCATCTGCTATATTTGTGTTAGCATGTCGTTGCAAATCCTTTCTGGAAAAGTTGTCTCGCAGCACTCTCCAAACTCGCTCCTTGATAAAATTAAATACTTAG

Protein sequence

MPPSKISASARLLTQKIQLKSHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEMERQKDNRKIKKWNEEPIKTGRSKFNPRYYCRESRPHVSLYFYGSTVLKLLLLESSAIFVLACRCKSFLEKLSRSTLQTRSLIKLNT

Homology

[Close]

BLAST of PI0024150 vs. ExPASy TrEMBL
Match: A0A6J1C7G5 (uncharacterized protein LOC111008113 OS=Momordica charantia OX=3673 GN=LOC111008113 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.5e-39
Identity = 82/106 (77.36%), Postives = 95/106 (89.62%), Query Frame = 0


Query: 1   MPPSKISASARLLTQKIQLKSHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDK 60
           M P+KI+ +A +L++K+Q K  LCKFLGIPLVSPRGDIPILIS+FLKLY+PQSPG+RKD+
Sbjct: 1   MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDR 60

Query: 61  IWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEMERQKDNR 107
           IWEENLKAIL GKDGVG+ E+NKILSPQFND SLRN EMERQKD R
Sbjct: 61  IWEENLKAILCGKDGVGMPEVNKILSPQFNDSSLRNMEMERQKDIR 106

[Close]

BLAST of PI0024150 vs. ExPASy TrEMBL
Match: A0A4P1QT43 (SWIB domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_25457 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.7e-15
Identity = 48/101 (47.52%), Postives = 68/101 (67.33%), Query Frame = 0


Query: 21  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAE 80
           S LCKF+GIP  S R +I ++IS+FLKLY  +SPGI+KDKIWE+NL+ +L GK+ +G  E
Sbjct: 45  SELCKFIGIPQQS-RSEIALIISKFLKLYNFKSPGIKKDKIWEQNLQTLLRGKNSIGFPE 104

Query: 81  INKILSPQFNDPSLRNKEMERQKDNRKIKKWNEEPIKTGRS 122
           + KILSP+F+  ++  KE         +K  N +  K G+S
Sbjct: 105 VAKILSPEFSQGAINIKESNTDSFADNVKGKNSQ--KKGKS 142

[Close]

BLAST of PI0024150 vs. ExPASy TrEMBL
Match: A0A6A4Q0B8 (Putative transcription regulator SWI/SNF-BAF60b family OS=Lupinus albus OX=3870 GN=Lal_00026358 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 4.6e-15
Identity = 46/91 (50.55%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 21  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAE 80
           S LCKF+GIP  S R +I ++IS+FLKLY  +SPGI+KDKIWE+NL+ +L GK+ +G  E
Sbjct: 45  SELCKFIGIPQQS-RSEIALIISKFLKLYNFKSPGIKKDKIWEQNLQTLLRGKNSIGFPE 104

Query: 81  INKILSPQFNDPSLRNKEMERQK--DNRKIK 110
           + KILSP+F+  ++  K+       DN K K
Sbjct: 105 VAKILSPEFSQGAINIKDSNTDSFADNTKGK 134

[Close]

BLAST of PI0024150 vs. ExPASy TrEMBL
Match: A0A6A5MEA5 (Putative transcription regulator SWI/SNF-BAF60b family OS=Lupinus albus OX=3870 GN=Lal_00027299 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 4.6e-15
Identity = 46/91 (50.55%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 21  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAE 80
           S LCKF+GIP  S R +I ++IS+FLKLY  +SPGI+KDKIWE+NL+ +L GK+ +G  E
Sbjct: 45  SELCKFIGIPQQS-RSEIALIISKFLKLYNFKSPGIKKDKIWEQNLQTLLRGKNSIGFPE 104

Query: 81  INKILSPQFNDPSLRNKEMERQK--DNRKIK 110
           + KILSP+F+  ++  K+       DN K K
Sbjct: 105 VAKILSPEFSQGAINIKDSSTDSFADNMKGK 134

[Close]

BLAST of PI0024150 vs. ExPASy TrEMBL
Match: A0A2N9FY31 (SWIB domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23399 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 6.1e-15
Identity = 50/102 (49.02%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 21  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAE 80
           S   KFLGIP  S R    +LIS+FLKLY  QSPGI+KD IWE+NL  +LHGKD VG+ E
Sbjct: 55  SEFRKFLGIPGTS-RSPNALLISKFLKLYTAQSPGIKKDNIWEDNLNKLLHGKDRVGLPE 114

Query: 81  INKILSPQFNDPSLRNKEMERQKDNRKIKKWNEEPIKTGRSK 123
           I K+LSPQFN     N E + + + +  K   +   K  + K
Sbjct: 115 IAKLLSPQFNQKGGMNAESKTEDNKQHHKGGGKAKAKAKKKK 155

[Close]

BLAST of PI0024150 vs. NCBI nr
Match: XP_022136393.1 (uncharacterized protein LOC111008113 [Momordica charantia])

HSP 1 Score: 171.4 bits (433), Expect = 7.3e-39
Identity = 82/106 (77.36%), Postives = 95/106 (89.62%), Query Frame = 0


Query: 1   MPPSKISASARLLTQKIQLKSHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDK 60
           M P+KI+ +A +L++K+Q K  LCKFLGIPLVSPRGDIPILIS+FLKLY+PQSPG+RKD+
Sbjct: 1   MAPAKITVAAHILSKKLQFKPQLCKFLGIPLVSPRGDIPILISKFLKLYQPQSPGLRKDR 60

Query: 61  IWEENLKAILHGKDGVGIAEINKILSPQFNDPSLRNKEMERQKDNR 107
           IWEENLKAIL GKDGVG+ E+NKILSPQFND SLRN EMERQKD R
Sbjct: 61  IWEENLKAILCGKDGVGMPEVNKILSPQFNDSSLRNMEMERQKDIR 106

[Close]

BLAST of PI0024150 vs. NCBI nr
Match: KAG7015106.1 (hypothetical protein SDJN02_22739 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-21
Identity = 54/72 (75.00%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 1  MPPSKISASARLLTQKIQLKSHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDK 60
          M P+KIS  ARLL+QKIQLK  LCKFLGIPL++PRGDIPILI++FLK Y+ QSPGI KD 
Sbjct: 1  MAPAKISVGARLLSQKIQLKPQLCKFLGIPLIAPRGDIPILITKFLKFYQHQSPGIGKDW 60

Query: 61 IWEENLKAILHG 73
           WEENLKA LHG
Sbjct: 61 TWEENLKATLHG 72

[Close]

BLAST of PI0024150 vs. NCBI nr
Match: KAG6577105.1 (hypothetical protein SDJN03_24679, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-16
Identity = 49/71 (69.01%), Postives = 57/71 (80.28%), Query Frame = 0


Query: 3  PSKISASARLLT-QKIQLKSHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKI 62
          P  I+ +  L+T +KIQLK  LCKFLGIPLV+PRGDIPILI++FLK Y+ QSPGI KD  
Sbjct: 21 PITITINHDLVTAKKIQLKPQLCKFLGIPLVAPRGDIPILITKFLKFYQHQSPGIGKDWT 80

Query: 63 WEENLKAILHG 73
          WEENLKA LHG
Sbjct: 81 WEENLKATLHG 91

[Close]

BLAST of PI0024150 vs. NCBI nr
Match: XP_019421169.1 (PREDICTED: uncharacterized protein LOC109331245 [Lupinus angustifolius] >OIV94395.1 hypothetical protein TanjilG_25457 [Lupinus angustifolius])

HSP 1 Score: 92.0 bits (227), Expect = 5.6e-15
Identity = 48/101 (47.52%), Postives = 68/101 (67.33%), Query Frame = 0


Query: 21  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAE 80
           S LCKF+GIP  S R +I ++IS+FLKLY  +SPGI+KDKIWE+NL+ +L GK+ +G  E
Sbjct: 45  SELCKFIGIPQQS-RSEIALIISKFLKLYNFKSPGIKKDKIWEQNLQTLLRGKNSIGFPE 104

Query: 81  INKILSPQFNDPSLRNKEMERQKDNRKIKKWNEEPIKTGRS 122
           + KILSP+F+  ++  KE         +K  N +  K G+S
Sbjct: 105 VAKILSPEFSQGAINIKESNTDSFADNVKGKNSQ--KKGKS 142

[Close]

BLAST of PI0024150 vs. NCBI nr
Match: KAE9606954.1 (putative transcription regulator SWI/SNF-BAF60b family [Lupinus albus] >KAF1861883.1 hypothetical protein Lal_00026358 [Lupinus albus])

HSP 1 Score: 91.3 bits (225), Expect = 9.6e-15
Identity = 46/91 (50.55%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 21  SHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAE 80
           S LCKF+GIP  S R +I ++IS+FLKLY  +SPGI+KDKIWE+NL+ +L GK+ +G  E
Sbjct: 45  SELCKFIGIPQQS-RSEIALIISKFLKLYNFKSPGIKKDKIWEQNLQTLLRGKNSIGFPE 104

Query: 81  INKILSPQFNDPSLRNKEMERQK--DNRKIK 110
           + KILSP+F+  ++  K+       DN K K
Sbjct: 105 VAKILSPEFSQGAINIKDSNTDSFADNTKGK 134

[Close]

BLAST of PI0024150 vs. TAIR 10
Match: AT1G31760.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.5e-05
Identity = 23/55 (41.82%), Postives = 33/55 (60.00%), Query Frame = 0


Query: 35  RGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILSPQF 90
           RG     +  ++KL+  Q+P  +K+   ++ LK I  GKD VGI EI K+LSP F
Sbjct: 54  RGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIFDGKDKVGITEIMKLLSPHF 108

[Close]

BLAST of PI0024150 vs. TAIR 10
Match: AT3G03590.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 4.3e-05
Identity = 27/67 (40.30%), Postives = 38/67 (56.72%), Query Frame = 0


Query: 23  LCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEIN 82
           L +FLG    S R D    I  ++K +  Q+P  +++   +E LK I  GKD VG  EI+
Sbjct: 74  LAQFLGTGETS-RTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEGKDKVGFLEIS 133

Query: 83  KILSPQF 90
           K+LSP F
Sbjct: 134 KLLSPHF 139

[Close]

BLAST of PI0024150 vs. TAIR 10
Match: AT2G35605.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 2.8e-04
Identity = 26/73 (35.62%), Postives = 39/73 (53.42%), Query Frame = 0


Query: 17  IQLKSHLCKFLGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGV 76
           + +   L  F+G   VS R      I  ++KL   Q+P  +++ + +E LK I  GKD V
Sbjct: 34  VPVSKPLANFIGENEVS-RTTAVKKIWEYIKLNNLQNPVNKREILCDEQLKTIFSGKDTV 93

Query: 77  GIAEINKILSPQF 90
           G  EI+K+LS  F
Sbjct: 94  GFLEISKLLSQHF 105

[Close]

BLAST of PI0024150 vs. TAIR 10
Match: AT4G34290.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 42.0 bits (97), Expect = 6.2e-04
Identity = 22/63 (34.92%), Postives = 35/63 (55.56%), Query Frame = 0


Query: 27  LGIPLVSPRGDIPILISRFLKLYRPQSPGIRKDKIWEENLKAILHGKDGVGIAEINKILS 86
           +G+P + PR      I  ++K +  Q P  ++D + +E LK I  GK+ VG  EI K++ 
Sbjct: 82  VGVPEI-PRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGKERVGFLEIAKLIG 141

Query: 87  PQF 90
           P F
Sbjct: 142 PHF 143

The following BLAST results are available for this feature:

BLAST of PI0024150 vs.


Match Name	E-value	Identity	Description

BLAST of PI0024150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C7G5	3.5e-39	77.36	uncharacterized protein LOC111008113 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A4P1QT43	2.7e-15	47.52	SWIB domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_25457...	[more]
A0A6A4Q0B8	4.6e-15	50.55	Putative transcription regulator SWI/SNF-BAF60b family OS=Lupinus albus OX=3870 ...	[more]
A0A6A5MEA5	4.6e-15	50.55	Putative transcription regulator SWI/SNF-BAF60b family OS=Lupinus albus OX=3870 ...	[more]
A0A2N9FY31	6.1e-15	49.02	SWIB domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23399 PE=...	[more]

BLAST of PI0024150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136393.1	7.3e-39	77.36	uncharacterized protein LOC111008113 [Momordica charantia]	[more]
KAG7015106.1	1.4e-21	75.00	hypothetical protein SDJN02_22739 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6577105.1	1.0e-16	69.01	hypothetical protein SDJN03_24679, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_019421169.1	5.6e-15	47.52	PREDICTED: uncharacterized protein LOC109331245 [Lupinus angustifolius] >OIV9439...	[more]
KAE9606954.1	9.6e-15	50.55	putative transcription regulator SWI/SNF-BAF60b family [Lupinus albus] >KAF18618...	[more]

BLAST of PI0024150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31760.1	1.5e-05	41.82	SWIB/MDM2 domain superfamily protein	[more]
AT3G03590.1	4.3e-05	40.30	SWIB/MDM2 domain superfamily protein	[more]
AT2G35605.1	2.8e-04	35.62	SWIB/MDM2 domain superfamily protein	[more]
AT4G34290.1	6.2e-04	34.92	SWIB/MDM2 domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	PANTHER	PTHR13844	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	coord: 15..109
None	No IPR available	PANTHER	PTHR13844:SF42	TRANSCRIPTION REGULATOR SWI/SNF-BAF60B FAMILY-RELATED	coord: 15..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0024150.1	PI0024150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane