PI0023625 (gene) Melon (PI 482460) v1

Overview
NamePI0023625
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr02: 24467857 .. 24468190 (-)
RNA-Seq ExpressionPI0023625
SyntenyPI0023625
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGTCGCCATGGAAGCAAAGGTATCGGTGAAGTAGGTGCCATTTTTCAGTAGCAGGTGAAACCCAGCGGATGACGTTTGACAAATTGCGGCTTTTATTCTGTTTGGATCAGCCATTAAATCTGGGCCTGGCCCAACTTATACCAGCCCAATTTCATTGCTCGAGAAAGACAAAAGTACGGCTGCTACCGGCGGTGTTCGAGCTTTGTTCTCCTTGCTTGTCCTCACGGCCACGGCGGTTCTGAAAGACGAAAATTTCAGCAAAGTAAATTATGGGTATCGAAATTTGTGGAAAAATAGACAAAGTAAATGGAAAAGAACTGAGTTATAA

mRNA sequence

ATGGCGGGTCGCCATGGAAGCAAAGGTATCGGTGAAGTAGGTGCCATTTTTCACCCAATTTCATTGCTCGAGAAAGACAAAAGTACGGCTGCTACCGGCGGTGTTCGAGCTTTGTTCTCCTTGCTTGTCCTCACGGCCACGGCGGTTCTGAAAGACGAAAATTTCAGCAAAGTAAATTATGGGTATCGAAATTTGTGGAAAAATAGACAAAGTAAATGGAAAAGAACTGAGTTATAA

Coding sequence (CDS)

ATGGCGGGTCGCCATGGAAGCAAAGGTATCGGTGAAGTAGGTGCCATTTTTCACCCAATTTCATTGCTCGAGAAAGACAAAAGTACGGCTGCTACCGGCGGTGTTCGAGCTTTGTTCTCCTTGCTTGTCCTCACGGCCACGGCGGTTCTGAAAGACGAAAATTTCAGCAAAGTAAATTATGGGTATCGAAATTTGTGGAAAAATAGACAAAGTAAATGGAAAAGAACTGAGTTATAA

Protein sequence

MAGRHGSKGIGEVGAIFHPISLLEKDKSTAATGGVRALFSLLVLTATAVLKDENFSKVNYGYRNLWKNRQSKWKRTEL
Homology
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BLAST of PI0023625 vs. ExPASy TrEMBL
Match: A0A0A0LRF6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004260 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.9e-29
Identity = 68/78 (87.18%), Postives = 71/78 (91.03%), Query Frame = 0 

Query: 1  MAGRHGSKGIGEVGAIFHPISLLEKDKSTAATGGVRALFSLLVLTATAVLKDENFSKVNY 60
          MAGRHGSK IGEVGAIFHPISLLEK++STAATG V  L SLLVLTATAVLKDENFSK N 
Sbjct: 1  MAGRHGSKAIGEVGAIFHPISLLEKNRSTAATGDVPPLVSLLVLTATAVLKDENFSKAND 60

Query: 61 GYRNLWKNRQSKWKRTEL 79
          GYRNLWKNRQSKW+RTEL
Sbjct: 61 GYRNLWKNRQSKWERTEL 78

The following BLAST results are available for this feature:
BLAST of PI0023625 vs.
Match NameE-valueIdentityDescription
BLAST of PI0023625 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRF66.9e-2987.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004260 PE=4 SV=1[more]
BLAST of PI0023625 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of PI0023625 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0023625.1PI0023625.1mRNA