Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTGCTGTCTAAATCTTACCTCTTTCATCCCAGCTCTTCTTTTGGCAGCTTTTTCCCTAACCATTTTCCCTTCTCATGGAATCCCCCATGAAAATCTGGTCACCATTTGCTCTAAAACCTTCAATCCGTCACTCTGTGAGAAAATCCTTAATAATGATTCCCAAACCGTCTCAGCCGACTTCCCTAAGCTCTCACTTATATGCAGCAATCTGACAAAGAAACAAGCAAATCAAAACCTTGATACCTTCTACAAACTAAGTAAGAATGAGAGTGATCCTGAGGAGAAGAAAAGTTTTGAGCATTGTGTGGAGTATTACCATGAAATTCAATCAAATATCCAAAAAGCTTATCAGTTCTCACAGCAGAAGATCTTCAGAGAGAATGGTCCATTGATAGCATCAAAGAGACTTGTTCTAGGGTGTAGTCAAGCCATTAGAATCAATTCATTGCATATTGAAGTCATGAACAAACTTATGATCCTATGTTGTGATATTTCAATAAGCGTAAATCAATGTGCTGCTGCCAATGGTCACATTCAGTAA
mRNA sequence
ATGAATTGCTGTCTAAATCTTACCTCTTTCATCCCAGCTCTTCTTTTGGCAGCTTTTTCCCTAACCATTTTCCCTTCTCATGGAATCCCCCATGAAAATCTGGTCACCATTTGCTCTAAAACCTTCAATCCGTCACTCTGTGAGAAAATCCTTAATAATGATTCCCAAACCGTCTCAGCCGACTTCCCTAAGCTCTCACTTATATGCAGCAATCTGACAAAGAAACAAGCAAATCAAAACCTTGATACCTTCTACAAACTAAGTAAGAATGAGAGTGATCCTGAGGAGAAGAAAAGTTTTGAGCATTGTGTGGAGTATTACCATGAAATTCAATCAAATATCCAAAAAGCTTATCAGTTCTCACAGCAGAAGATCTTCAGAGAGAATGGTCCATTGATAGCATCAAAGAGACTTGTTCTAGGGTGTAGTCAAGCCATTAGAATCAATTCATTGCATATTGAAGTCATGAACAAACTTATGATCCTATGTTGTGATATTTCAATAAGCGTAAATCAATGTGCTGCTGCCAATGGTCACATTCAGTAA
Coding sequence (CDS)
ATGAATTGCTGTCTAAATCTTACCTCTTTCATCCCAGCTCTTCTTTTGGCAGCTTTTTCCCTAACCATTTTCCCTTCTCATGGAATCCCCCATGAAAATCTGGTCACCATTTGCTCTAAAACCTTCAATCCGTCACTCTGTGAGAAAATCCTTAATAATGATTCCCAAACCGTCTCAGCCGACTTCCCTAAGCTCTCACTTATATGCAGCAATCTGACAAAGAAACAAGCAAATCAAAACCTTGATACCTTCTACAAACTAAGTAAGAATGAGAGTGATCCTGAGGAGAAGAAAAGTTTTGAGCATTGTGTGGAGTATTACCATGAAATTCAATCAAATATCCAAAAAGCTTATCAGTTCTCACAGCAGAAGATCTTCAGAGAGAATGGTCCATTGATAGCATCAAAGAGACTTGTTCTAGGGTGTAGTCAAGCCATTAGAATCAATTCATTGCATATTGAAGTCATGAACAAACTTATGATCCTATGTTGTGATATTTCAATAAGCGTAAATCAATGTGCTGCTGCCAATGGTCACATTCAGTAA
Protein sequence
MNCCLNLTSFIPALLLAAFSLTIFPSHGIPHENLVTICSKTFNPSLCEKILNNDSQTVSADFPKLSLICSNLTKKQANQNLDTFYKLSKNESDPEEKKSFEHCVEYYHEIQSNIQKAYQFSQQKIFRENGPLIASKRLVLGCSQAIRINSLHIEVMNKLMILCCDISISVNQCAAANGHIQ
Homology
BLAST of PI0023617 vs. ExPASy Swiss-Prot
Match:
P83326 (Pectinesterase inhibitor OS=Actinidia deliciosa OX=3627 GN=PMEI PE=1 SV=2)
HSP 1 Score: 47.8 bits (112), Expect = 1.6e-04
Identity = 33/113 (29.20%), Postives = 53/113 (46.90%), Query Frame = 0
Query: 10 FIPALLLAAFSLTIFPSHGIPHEN--LVTICSKTFNPSLCEKILNNDSQTVSADFPKLSL 69
F+ LL+ F + + EN + IC KT NPSLC + L +D ++ S D L
Sbjct: 11 FVSLLLVILFISPLSQRPSVKAENHLISEICPKTRNPSLCLQALESDPRSASKDLKGLGQ 70
Query: 70 ICSNLTKKQANQNLDTFYKLSKNESDPEEKKSFEHCVEYYHEIQSNIQKAYQF 121
++ + A Q L+ +DP+ K +E C E Y + ++ +A QF
Sbjct: 71 FSIDIAQASAKQTSKIIASLTNQATDPKLKGRYETCSENYADAIDSLGQAKQF 123
BLAST of PI0023617 vs. ExPASy TrEMBL
Match:
A0A5A7U3I1 (Pectinesterase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001900 PE=4 SV=1)
HSP 1 Score: 342.0 bits (876), Expect = 1.5e-90
Identity = 172/181 (95.03%), Postives = 175/181 (96.69%), Query Frame = 0
Query: 1 MNCCLNLTSFIPALLLAAFSLTIFPSHGIPHENLVTICSKTFNPSLCEKILNNDSQTVSA 60
MNCCLNLTSFIPALLLA FSLTIFPSHGIPHENLVTICSKT NPSLCEKILNNDS+TVSA
Sbjct: 1 MNCCLNLTSFIPALLLATFSLTIFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA 60
Query: 61 DFPKLSLICSNLTKKQANQNLDTFYKLSKNESDPEEKKSFEHCVEYYHEIQSNIQKAYQF 120
D PKLSLICSNL KKQA+QNLDTFYKLSKNESDPE KKSFEHCVEYYHEIQSNIQKAYQF
Sbjct: 61 DLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEVKKSFEHCVEYYHEIQSNIQKAYQF 120
Query: 121 SQQKIFRENGPLIASKRLVLGCSQAIRINSLHIEVMNKLMILCCDISISVNQCAAANGHI 180
SQQKIFRENGPL+ASKRLVL CSQAIRINSLHIEVMNKLMILCCDISISVNQCAAANGHI
Sbjct: 121 SQQKIFRENGPLVASKRLVLRCSQAIRINSLHIEVMNKLMILCCDISISVNQCAAANGHI 180
Query: 181 Q 182
Q
Sbjct: 181 Q 181
BLAST of PI0023617 vs. ExPASy TrEMBL
Match:
A0A0A0LK13 (PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G034700 PE=4 SV=1)
HSP 1 Score: 335.1 bits (858), Expect = 1.8e-88
Identity = 167/179 (93.30%), Postives = 174/179 (97.21%), Query Frame = 0
Query: 1 MNCCLNLTSFIPALLLAAFSLTIFPSHGIPHENLVTICSKTFNPSLCEKILNNDSQTVSA 60
MNCCLNLTSFIPALLLAAFSLT+FPSHGIPHENLVTICSKT NPSLCEKILNNDS+TVSA
Sbjct: 1 MNCCLNLTSFIPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA 60
Query: 61 DFPKLSLICSNLTKKQANQNLDTFYKLSKNESDPEEKKSFEHCVEYYHEIQSNIQKAYQF 120
+ PKLSLICSNL KKQA+QNLDTFYKLSKNESDPEEKKSFEHCV+YYHEIQSNIQKAYQF
Sbjct: 61 NLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQF 120
Query: 121 SQQKIFRENGPLIASKRLVLGCSQAIRINSLHIEVMNKLMILCCDISISVNQCAAANGH 180
SQQKIFRENGPL+ASKRLVL CSQ IRINSL+IEVMNKLMILCCDISISVNQCAAANGH
Sbjct: 121 SQQKIFRENGPLVASKRLVLKCSQTIRINSLYIEVMNKLMILCCDISISVNQCAAANGH 179
BLAST of PI0023617 vs. ExPASy TrEMBL
Match:
A0A6A1UMD5 (Pectinesterase inhibitor OS=Morella rubra OX=262757 GN=CJ030_MR0G004165 PE=4 SV=1)
HSP 1 Score: 127.9 bits (320), Expect = 4.4e-26
Identity = 73/168 (43.45%), Postives = 101/168 (60.12%), Query Frame = 0
Query: 8 TSFIPALLLAAFSLTIFPSHGIPHENLVTICSKTFNPSLCEKILNNDSQTVSADFPKLSL 67
T + +L+ S I+PS G+ H+ L TICSKT N CE+ L +DS+T SAD PKLSL
Sbjct: 5 TLAVSVTVLSVASFLIYPSSGVSHDILTTICSKTQNHDACERSLESDSRTRSADLPKLSL 64
Query: 68 ICSNLTKKQANQNLDTFYKLSKNESDPEEKKSFEHCVEYYHEIQSNIQKAYQFSQQKIFR 127
I LT KQA+ N TF L N +DP + SF +CV +Y E+Q+ I+ AY SQ++ ++
Sbjct: 65 ISIELTMKQADHNHRTFSDLRDNATDPRLEDSFRNCVGFYKEMQAQIRAAYHLSQKRQYQ 124
Query: 128 ENGPLIASKRLVLGCSQAIRINSLHIEVMNKLMILCCDISISVNQCAA 176
+ L+ S+RL C+ I IN L I+ + M+L S SVNQ A
Sbjct: 125 KITELVQSERLAQECASGIPINCLEIDALTTTMLLAIKTSESVNQYIA 172
BLAST of PI0023617 vs. ExPASy TrEMBL
Match:
A0A061F340 (PMEI domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_026801 PE=4 SV=1)
HSP 1 Score: 124.8 bits (312), Expect = 3.7e-25
Identity = 72/173 (41.62%), Postives = 101/173 (58.38%), Query Frame = 0
Query: 7 LTSFIPAL----LLAAFSLTIFPSHGIPHENLVTICSKTFNPSLCEKILNNDSQTVSADF 66
+ S+ P L LL AFS+ I PS +P+E LV ICSKT+NP LC IL D +T SAD
Sbjct: 1 MASYTPRLLALTLLVAFSV-IHPSSSVPNETLVAICSKTYNPILCASILRGDPRTSSADL 60
Query: 67 PKLSLICSNLTKKQANQNLDTFYKLSKNESDPEEKKSFEHCVEYYHEIQSNIQKAYQFSQ 126
P+LSL+ NLT +QA N F + N +DP KK F CVE Y ++ N+ KAY S+
Sbjct: 61 PELSLVSINLTIEQAANNSQVFVEFHDNTTDPALKKGFNSCVELYQLMEDNLDKAYHRSE 120
Query: 127 QKIFRENGPLIASKRLVLGCSQAIRINSLHIEVMNKLMILCCDISISVNQCAA 176
+R L+ S + C+ A+ IN + I+ + + ++ C+ S+SVNQ A
Sbjct: 121 GGDYRNITELVQSSNQAVECASALAINLVTIDALTRAVVSKCETSVSVNQYIA 172
BLAST of PI0023617 vs. ExPASy TrEMBL
Match:
A0A438CFW3 (PMEI domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_097019 PE=4 SV=1)
HSP 1 Score: 109.4 bits (272), Expect = 1.6e-20
Identity = 67/164 (40.85%), Postives = 94/164 (57.32%), Query Frame = 0
Query: 9 SFIPALLLAAFSLTIFPSHGIPHENLVTICSKTFNPSLCEKILNNDSQTVSADFPKLSLI 68
+F+ A LL FSL P+ G+ E L +ICS+T N +CE IL +D T SAD LSLI
Sbjct: 8 TFMFAALLMVFSLFTSPTSGVTQETLASICSQTQNQEICEGILESDPGTTSADLHGLSLI 67
Query: 69 CSNLTKKQANQNLDTFYKLSKNESDPEEKKSFEHCVEYYHEIQSNIQKAYQFSQQKIFRE 128
NLT KQ + N DTF K N +D K+SF +CV Y+ I ++ AYQ S++K +
Sbjct: 68 SINLTMKQGSSNYDTFTKFMDNSTDTALKESFRNCVSLYNSIMEMLKVAYQLSEKKEYES 127
Query: 129 NGPLIASKRLVLGCSQAIRINSLHIEVMNKLMILCCDISISVNQ 173
S+ L C+ + I+S + +++ MIL C+ S SVNQ
Sbjct: 128 ITQPGESQTLAYNCANGLPIDS-PTDGISRDMILTCETSASVNQ 170
BLAST of PI0023617 vs. NCBI nr
Match:
KAA0048111.1 (pectinesterase inhibitor [Cucumis melo var. makuwa])
HSP 1 Score: 342.0 bits (876), Expect = 3.0e-90
Identity = 172/181 (95.03%), Postives = 175/181 (96.69%), Query Frame = 0
Query: 1 MNCCLNLTSFIPALLLAAFSLTIFPSHGIPHENLVTICSKTFNPSLCEKILNNDSQTVSA 60
MNCCLNLTSFIPALLLA FSLTIFPSHGIPHENLVTICSKT NPSLCEKILNNDS+TVSA
Sbjct: 1 MNCCLNLTSFIPALLLATFSLTIFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA 60
Query: 61 DFPKLSLICSNLTKKQANQNLDTFYKLSKNESDPEEKKSFEHCVEYYHEIQSNIQKAYQF 120
D PKLSLICSNL KKQA+QNLDTFYKLSKNESDPE KKSFEHCVEYYHEIQSNIQKAYQF
Sbjct: 61 DLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEVKKSFEHCVEYYHEIQSNIQKAYQF 120
Query: 121 SQQKIFRENGPLIASKRLVLGCSQAIRINSLHIEVMNKLMILCCDISISVNQCAAANGHI 180
SQQKIFRENGPL+ASKRLVL CSQAIRINSLHIEVMNKLMILCCDISISVNQCAAANGHI
Sbjct: 121 SQQKIFRENGPLVASKRLVLRCSQAIRINSLHIEVMNKLMILCCDISISVNQCAAANGHI 180
Query: 181 Q 182
Q
Sbjct: 181 Q 181
BLAST of PI0023617 vs. NCBI nr
Match:
KAE8651630.1 (hypothetical protein Csa_021165 [Cucumis sativus])
HSP 1 Score: 336.7 bits (862), Expect = 1.3e-88
Identity = 168/179 (93.85%), Postives = 175/179 (97.77%), Query Frame = 0
Query: 1 MNCCLNLTSFIPALLLAAFSLTIFPSHGIPHENLVTICSKTFNPSLCEKILNNDSQTVSA 60
MNCCLNLTSFIPALLLAAFSLT+FPSHGIPHENLVTICSKT NPSLCEKILNNDS+TVSA
Sbjct: 490 MNCCLNLTSFIPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSA 549
Query: 61 DFPKLSLICSNLTKKQANQNLDTFYKLSKNESDPEEKKSFEHCVEYYHEIQSNIQKAYQF 120
+ PKLSLICSNL KKQA+QNLDTFYKLSKNESDPEEKKSFEHCV+YYHEIQSNIQKAYQF
Sbjct: 550 NLPKLSLICSNLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQF 609
Query: 121 SQQKIFRENGPLIASKRLVLGCSQAIRINSLHIEVMNKLMILCCDISISVNQCAAANGH 180
SQQKIFRENGPL+ASKRLVL CSQAIRINSL+IEVMNKLMILCCDISISVNQCAAANGH
Sbjct: 610 SQQKIFRENGPLVASKRLVLKCSQAIRINSLYIEVMNKLMILCCDISISVNQCAAANGH 668
BLAST of PI0023617 vs. NCBI nr
Match:
KAG6599172.1 (hypothetical protein SDJN03_08950, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030110.1 hypothetical protein SDJN02_08457, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 228.4 bits (581), Expect = 4.9e-56
Identity = 119/171 (69.59%), Postives = 138/171 (80.70%), Query Frame = 0
Query: 11 IPALLLAAFSLTIFPSHGIPHENLVTICSKTFNPSLCEKILNNDSQTVSADFPKLSLICS 70
IP LLLA F L IFPSHGI H NL TIC KT +P C++IL N T+SAD PKLSLI
Sbjct: 7 IPVLLLAVFYLAIFPSHGILHGNLATICYKTPDPFSCQRILGNVPGTISADLPKLSLISI 66
Query: 71 NLTKKQANQNLDTFYKLSKNESDPEEKKSFEHCVEYYHEIQSNIQKAYQFSQQKIFRENG 130
NLTK QA+QNLD+F KLSKNESDPE KKSF+HCV+YYHEIQ++IQKA++ S++KIFR+N
Sbjct: 67 NLTKNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIQAHIQKAFKLSRKKIFRDNH 126
Query: 131 PLIASKRLVLGCSQAIRINSLHIEVMNKLMILCCDISISVNQCAAANGHIQ 182
PL+ SK+LV C+QAIRINSL IEVMNK MIL CDIS+SVN A AN HIQ
Sbjct: 127 PLVTSKKLVKRCNQAIRINSLDIEVMNKRMILSCDISMSVNHYATANAHIQ 177
BLAST of PI0023617 vs. NCBI nr
Match:
KAB1201343.1 (Pectinesterase inhibitor [Morella rubra] >KAB1224060.1 Pectinesterase inhibitor [Morella rubra])
HSP 1 Score: 127.9 bits (320), Expect = 9.0e-26
Identity = 73/168 (43.45%), Postives = 101/168 (60.12%), Query Frame = 0
Query: 8 TSFIPALLLAAFSLTIFPSHGIPHENLVTICSKTFNPSLCEKILNNDSQTVSADFPKLSL 67
T + +L+ S I+PS G+ H+ L TICSKT N CE+ L +DS+T SAD PKLSL
Sbjct: 5 TLAVSVTVLSVASFLIYPSSGVSHDILTTICSKTQNHDACERSLESDSRTRSADLPKLSL 64
Query: 68 ICSNLTKKQANQNLDTFYKLSKNESDPEEKKSFEHCVEYYHEIQSNIQKAYQFSQQKIFR 127
I LT KQA+ N TF L N +DP + SF +CV +Y E+Q+ I+ AY SQ++ ++
Sbjct: 65 ISIELTMKQADHNHRTFSDLRDNATDPRLEDSFRNCVGFYKEMQAQIRAAYHLSQKRQYQ 124
Query: 128 ENGPLIASKRLVLGCSQAIRINSLHIEVMNKLMILCCDISISVNQCAA 176
+ L+ S+RL C+ I IN L I+ + M+L S SVNQ A
Sbjct: 125 KITELVQSERLAQECASGIPINCLEIDALTTTMLLAIKTSESVNQYIA 172
BLAST of PI0023617 vs. NCBI nr
Match:
XP_007031213.2 (PREDICTED: pectinesterase inhibitor [Theobroma cacao])
HSP 1 Score: 127.5 bits (319), Expect = 1.2e-25
Identity = 74/173 (42.77%), Postives = 102/173 (58.96%), Query Frame = 0
Query: 7 LTSFIPAL----LLAAFSLTIFPSHGIPHENLVTICSKTFNPSLCEKILNNDSQTVSADF 66
+ S+ P L LL AFS+ I PS +P+E LV ICSKT+NP LCE IL D +T SAD
Sbjct: 1 MASYTPRLLALTLLVAFSV-IHPSSSVPNETLVAICSKTYNPILCESILRGDPRTSSADL 60
Query: 67 PKLSLICSNLTKKQANQNLDTFYKLSKNESDPEEKKSFEHCVEYYHEIQSNIQKAYQFSQ 126
P+LSL+ NLT +QA N F + N +DP KK F CVE Y ++ N+ KAY S+
Sbjct: 61 PELSLVSINLTIEQAANNSQVFVEFHDNTTDPALKKGFNSCVELYQLMEDNLDKAYHRSE 120
Query: 127 QKIFRENGPLIASKRLVLGCSQAIRINSLHIEVMNKLMILCCDISISVNQCAA 176
+R L+ S + C+ A+ IN + I+ + + ++ C+ SISVNQ A
Sbjct: 121 GGDYRNITELVQSSNQAVECASALAINLVTIDALTRAVVSKCETSISVNQYIA 172
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P83326 | 1.6e-04 | 29.20 | Pectinesterase inhibitor OS=Actinidia deliciosa OX=3627 GN=PMEI PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7U3I1 | 1.5e-90 | 95.03 | Pectinesterase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... | [more] |
A0A0A0LK13 | 1.8e-88 | 93.30 | PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G034700 PE=4 S... | [more] |
A0A6A1UMD5 | 4.4e-26 | 43.45 | Pectinesterase inhibitor OS=Morella rubra OX=262757 GN=CJ030_MR0G004165 PE=4 SV=... | [more] |
A0A061F340 | 3.7e-25 | 41.62 | PMEI domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_026801 PE=4 SV=... | [more] |
A0A438CFW3 | 1.6e-20 | 40.85 | PMEI domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_097019 PE=4 S... | [more] |
Match Name | E-value | Identity | Description | |
KAA0048111.1 | 3.0e-90 | 95.03 | pectinesterase inhibitor [Cucumis melo var. makuwa] | [more] |
KAE8651630.1 | 1.3e-88 | 93.85 | hypothetical protein Csa_021165 [Cucumis sativus] | [more] |
KAG6599172.1 | 4.9e-56 | 69.59 | hypothetical protein SDJN03_08950, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAB1201343.1 | 9.0e-26 | 43.45 | Pectinesterase inhibitor [Morella rubra] >KAB1224060.1 Pectinesterase inhibitor ... | [more] |
XP_007031213.2 | 1.2e-25 | 42.77 | PREDICTED: pectinesterase inhibitor [Theobroma cacao] | [more] |
Match Name | E-value | Identity | Description | |