PI0023557 (gene) Melon (PI 482460) v1

Overview


Name	PI0023557
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Reticulon-like protein
Location	chr08: 22600329 .. 22601961 (-)
RNA-Seq Expression	PI0023557
Synteny	PI0023557

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCCTCCGATCGTTTATTTTGTAGGCAGCGAACCCTTCATGAAATTGTTGGCGGTGGTATTGGTATGTCAAGATCTTCTCATTTCTGGGTTTTTTTTTCCTTGATGGATCCTCTTTAAATTTCTTTTGGATTGCTCTGTTTCGGTTCTCTATTGAGTTTTCTGTTGAATTTCATCGCAGTGATGTTTTGTTTAGGAAAATTTTAATCTATGAACTATTTTCTTCTTTTCTTCATCGCAAATGAAATTCTTGCTGTGGATTCTGCTTTTCACTGCAGCTGCTAGAGTTCTAGGATCCATTTCTTTTGCTATAAAATCACTAAGGATTGGATTTAACTGTTGAGTTTTTAATCTGTTCAGTTGCAGATGTAATTCTTTGGAGACGGAAGAATCTAACTGTGGGGATATTGTTAGTAACGCTGGCGACTTGGCTGGTGTTTGAGAGATGTGGTTACACCCTTTTGTCTTTAATTTCCAGTGTTCTACTTCTTCTTGTTACCATTATTTTTCTCTGGGCCAAATCTGCTTCCATTCTCAATAGGTAACTAATCGGAGATTGCCTCTTGACTTGCCTGTTATAAGCTATCTCTTCAATTTGAATATCAACGAAGAATGGTAAACTGATATATAAGTTTGAGAATGCACGATCTTTAATAGATAAGAGGCATTTCCCTATTGGATTTGACAATGGTCTTGAATAATGATTAGGGCCTGGTTCAAATTCTCTAGTTTTTCAACTACTTAATCTGTTAATTTGTCCTTGCTTTCTTTTACATTTGACGAACATTTTTGGGATTTTTACTTCCATGAGTTTCACTCACTTAGTAATATTATGAGATATGTAAATGCATTTGGGAAAGATGATGAACCTGAGTCTGAGTGAGACTGAGTGAGAGACAATAGTTAGATCTTCACATGTTCTTCTAAGCGTAATAAGCTTAGAGATGAAACAATTCGGTAGTTTTCAAGCATTCTAAAACTTATCAATTTAAAATATAGTATTTAGTTTTTGTTCCACTGCTGTCTCCTGGGTTCAGAAGTGAAAATTGTTGTTCTTAAATTTCCCTATGTATTTCCAAGCTTCCTTAGTCCCATGCTAATCAAGTGTAGCTCAACTTCTAAGTACTTGGATTAAGGTTACTTCTGAATCTGGTACTTTTCTTCCTGAACAGGCCGGCACCGCCTCTTCCTGAGTTGCATCTCTCAGAAGATATGGTAAACGAAGTTGCATCTTTCATCCGTTCCCGTGTGAATACTTTGCTGTCTGTTTCACAAGATATAGCCATGGGAAAAGACCCCAGATTGTTCTTCAAAGTAGCTGCTTGCCTGTGGCTGATCTCAGTTATCAGTGGCTTGACTGATATTATCACTTTGGGTTACACCAGTAAGTTTTCAATCTTCAGTTTCCATAATTGGACGATGATCAATGGATTTCATAGACATTTTTCTCTCAATGACAGGCCTTCTACTCGTGCTTACAATCCCTGCATTGTATGAGAAGTATGAAGATTATGTAGATAGACATGCCATATTGATGTACAGAAAATTGTATCAGTTTTATGTGAAATTGGATGAGATGCGAGTTCTGACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGA

mRNA sequence

ATGGGTTCCTCCGATCGTTTATTTTGTAGGCAGCGAACCCTTCATGAAATTGTTGGCGGTGGTATTGTTGCAGATGTAATTCTTTGGAGACGGAAGAATCTAACTGTGGGGATATTGTTAGTAACGCTGGCGACTTGGCTGGTGTTTGAGAGATGTGGTTACACCCTTTTGTCTTTAATTTCCAGTGTTCTACTTCTTCTTGTTACCATTATTTTTCTCTGGGCCAAATCTGCTTCCATTCTCAATAGGCCGGCACCGCCTCTTCCTGAGTTGCATCTCTCAGAAGATATGGTAAACGAAGTTGCATCTTTCATCCGTTCCCGTGTGAATACTTTGCTGTCTGTTTCACAAGATATAGCCATGGGAAAAGACCCCAGATTGTTCTTCAAAGTAGCTGCTTGCCTGTGGCTGATCTCAGTTATCAGTGGCTTGACTGATATTATCACTTTGGGTTACACCAGCCTTCTACTCGTGCTTACAATCCCTGCATTGTATGAGAAGTATGAAGATTATGTAGATAGACATGCCATATTGATGTACAGAAAATTGTATCAGTTTTATGTGAAATTGGATGAGATGCGAGTTCTGACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGA

Coding sequence (CDS)

ATGGGTTCCTCCGATCGTTTATTTTGTAGGCAGCGAACCCTTCATGAAATTGTTGGCGGTGGTATTGTTGCAGATGTAATTCTTTGGAGACGGAAGAATCTAACTGTGGGGATATTGTTAGTAACGCTGGCGACTTGGCTGGTGTTTGAGAGATGTGGTTACACCCTTTTGTCTTTAATTTCCAGTGTTCTACTTCTTCTTGTTACCATTATTTTTCTCTGGGCCAAATCTGCTTCCATTCTCAATAGGCCGGCACCGCCTCTTCCTGAGTTGCATCTCTCAGAAGATATGGTAAACGAAGTTGCATCTTTCATCCGTTCCCGTGTGAATACTTTGCTGTCTGTTTCACAAGATATAGCCATGGGAAAAGACCCCAGATTGTTCTTCAAAGTAGCTGCTTGCCTGTGGCTGATCTCAGTTATCAGTGGCTTGACTGATATTATCACTTTGGGTTACACCAGCCTTCTACTCGTGCTTACAATCCCTGCATTGTATGAGAAGTATGAAGATTATGTAGATAGACATGCCATATTGATGTACAGAAAATTGTATCAGTTTTATGTGAAATTGGATGAGATGCGAGTTCTGACATACCAACAATGGATTTTGGAGAAAGAAAAACTGAGCTGA

Protein sequence

MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIAMGKDPRLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILMYRKLYQFYVKLDEMRVLTYQQWILEKEKLS

Homology

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BLAST of PI0023557 vs. ExPASy Swiss-Prot
Match: Q9M392 (Reticulon-like protein B12 OS=Arabidopsis thaliana OX=3702 GN=RTNLB12 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.7e-53
Identity = 107/189 (56.61%), Postives = 146/189 (77.25%), Query Frame = 0


Query: 3   SSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLISS 62
           SSD+LF R RT+HEI+GGGIVADV+LWR+KN++VGI+ VT+A+W+VFE   YT+ +LISS
Sbjct: 4   SSDKLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISS 63

Query: 63  VLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIAMG 122
           VLLLL++I+FLW+KSASILNRP+PPLPE  +SE M  E + ++R  VN LL VS DIAM 
Sbjct: 64  VLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMA 123

Query: 123 KDPRLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILMYRK 182
           +D  L+ KVA  L+L+S+I  L D  TL +TS+L+V+T+PA YE+YEDY+      +  K
Sbjct: 124 RDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFICNK 183

Query: 183 LYQFYVKLD 192
             + Y++L+
Sbjct: 184 TRELYLRLE 192

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BLAST of PI0023557 vs. ExPASy Swiss-Prot
Match: Q8GYH6 (Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-38
Identity = 90/206 (43.69%), Postives = 134/206 (65.05%), Query Frame = 0


Query: 3   SSD-RLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLIS 62
           SSD RL  RQ T+H+ +GGG  AD++LWRR++L++G+++++   WL+FE  G   LS+ S
Sbjct: 20  SSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSS 79

Query: 63  SVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIAM 122
            VLL+++ I F+ A+ ++  NR    LPEL LSE+MVN  A+  R ++N LL ++ D+ +
Sbjct: 80  DVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTV 139

Query: 123 GKDPRLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILMYR 182
           G D RLFFKV  CLWL+S I     + TL Y   +L +TIPALY KY+  VD+    ++R
Sbjct: 140 GNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHR 199

Query: 183 KLYQFYVKLDEMRVLTYQQWILEKEK 208
           +L   Y  +DE  V++   W L K+K
Sbjct: 200 RLSHHYKIVDE-NVISRLSWSLSKDK 224

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BLAST of PI0023557 vs. ExPASy Swiss-Prot
Match: Q9LT71 (Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.8e-34
Identity = 71/161 (44.10%), Postives = 110/161 (68.32%), Query Frame = 0


Query: 13  TLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLISSVLLLLVTIIF 72
           ++H+ +G G VAD++LWR +   V +L+ +   W +FER GY LLS +S+VLLLLV I F
Sbjct: 12  SVHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFF 71

Query: 73  LWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIAMGKDPRLFFKVA 132
           LWAKSA++LNRP PP+P + + E+  N+ A  +R  +N +LS++ DI + ++P    +V+
Sbjct: 72  LWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVS 131

Query: 133 ACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVD 174
             LW IS +  L + +TL Y  +LL L+ P +YEKY+D++D
Sbjct: 132 LVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID 172

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BLAST of PI0023557 vs. ExPASy Swiss-Prot
Match: Q9FFS0 (Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.5e-32
Identity = 70/187 (37.43%), Postives = 119/187 (63.64%), Query Frame = 0


Query: 6   RLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLISSVLL 65
           RLF R++ +H+++GGG  AD+ LWR K ++ G+L    A+W++FE   Y LL+ +    +
Sbjct: 51  RLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAI 110

Query: 66  LLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIAMGKDP 125
             +  +FLW+ + + +++  P +PE+H+ ED + ++ S +R  +N  L++ ++IA GKD 
Sbjct: 111 FALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDV 170

Query: 126 RLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILMYRKLYQ 185
           + F  V A LW++S+I    + +TL YT+ +L+ TIP LYEKYED VD +     R++ +
Sbjct: 171 KKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKK 230

Query: 186 FYVKLDE 193
            Y  LDE
Sbjct: 231 QYAVLDE 237

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BLAST of PI0023557 vs. ExPASy Swiss-Prot
Match: Q9SH59 (Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.8e-31
Identity = 70/186 (37.63%), Postives = 118/186 (63.44%), Query Frame = 0


Query: 6   RLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLISSVLL 65
           RLF R++ LH++ GGG  AD+ LWR K ++ G+L     +W++FE   Y LL+L   + +
Sbjct: 47  RLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISI 106

Query: 66  LLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIAMGKDP 125
           L + ++FLW+ +++ +++    +PE+H+ ED+V ++AS +R  +N   +V +DIA G+D 
Sbjct: 107 LALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDL 166

Query: 126 RLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILMYRKLYQ 185
           + F  V A LW++S +    + +TL Y + +L+ TIP LYEKYED VD       R++ +
Sbjct: 167 KKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKK 226

Query: 186 FYVKLD 192
            YV+ D
Sbjct: 227 QYVEFD 232

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BLAST of PI0023557 vs. ExPASy TrEMBL
Match: A0A5D3DMY4 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001110 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.6e-104
Identity = 202/209 (96.65%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLI 60
           MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLT GILL+TLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIA 120
           SSVLLLLVTIIFLWAKSASILNRPAPPLPEL+LSEDMVNE ASFIRS VNTLLSVSQDIA
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIA 120

Query: 121 MGKDPRLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILMY 180
           MGKDP+LFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVD+HAILMY
Sbjct: 121 MGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMY 180

Query: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           RKLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 209

[Close]

BLAST of PI0023557 vs. ExPASy TrEMBL
Match: A0A1S3B6E8 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103486331 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.6e-104
Identity = 202/209 (96.65%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLI 60
           MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLT GILL+TLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIA 120
           SSVLLLLVTIIFLWAKSASILNRPAPPLPEL+LSEDMVNE ASFIRS VNTLLSVSQDIA
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIA 120

Query: 121 MGKDPRLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILMY 180
           MGKDP+LFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVD+HAILMY
Sbjct: 121 MGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMY 180

Query: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           RKLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 209

[Close]

BLAST of PI0023557 vs. ExPASy TrEMBL
Match: A0A5A7TLS2 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G004970 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 3.9e-103
Identity = 202/210 (96.19%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLI 60
           MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLT GILL+TLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILN-RPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDI 120
           SSVLLLLVTIIFLWAKSASILN RPAPPLPEL+LSEDMVNE ASFIRS VNTLLSVSQDI
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNSRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI 120

Query: 121 AMGKDPRLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILM 180
           AMGKDP+LFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVD+HAILM
Sbjct: 121 AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM 180

Query: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           YRKLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 210

[Close]

BLAST of PI0023557 vs. ExPASy TrEMBL
Match: A0A0A0LFE7 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G732580 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 8.7e-103
Identity = 198/209 (94.74%), Postives = 205/209 (98.09%), Query Frame = 0


Query: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLI 60
           MGSSDRLFC+QRTLHEIVGGGIVADVILWRRKNLT+GILL+TLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIA 120
           SSVLLLLVTIIFLWAKSASILNRPAPPLPEL+LSEDMVNE ASFIRSRVN  LSV+QDIA
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIA 120

Query: 121 MGKDPRLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILMY 180
           MGKDPRLFFKVAACLWLISVISGLTD+ITL YTSLLLVLTIPALYEKYEDYVDRHAILMY
Sbjct: 121 MGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMY 180

Query: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           +KLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 KKLYQFYVKLDEMRVLTYQQWILEKEKLS 209

[Close]

BLAST of PI0023557 vs. ExPASy TrEMBL
Match: A0A1S4DUP5 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103486331 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.3e-102
Identity = 200/209 (95.69%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLI 60
           MGSSDRLFCRQRTLHEIVGGGI  DVILWRRKNLT GILL+TLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGI--DVILWRRKNLTAGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIA 120
           SSVLLLLVTIIFLWAKSASILNRPAPPLPEL+LSEDMVNE ASFIRS VNTLLSVSQDIA
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIA 120

Query: 121 MGKDPRLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILMY 180
           MGKDP+LFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVD+HAILMY
Sbjct: 121 MGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMY 180

Query: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           RKLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 207

[Close]

BLAST of PI0023557 vs. NCBI nr
Match: XP_038904646.1 (reticulon-like protein B12 [Benincasa hispida])

HSP 1 Score: 389.8 bits (1000), Expect = 1.5e-104
Identity = 202/209 (96.65%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLI 60
           MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILL+TLATWLVFERCGYTLLSL+
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLITLATWLVFERCGYTLLSLV 60

Query: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIA 120
           SSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNE ASFIRSRVNTLLSVSQDIA
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEAASFIRSRVNTLLSVSQDIA 120

Query: 121 MGKDPRLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILMY 180
           MGKDPRLFFKVAACLWLISVISGLTD+ITLGYTSLLLVLTIPALYEKYEDYVDRH ILMY
Sbjct: 121 MGKDPRLFFKVAACLWLISVISGLTDLITLGYTSLLLVLTIPALYEKYEDYVDRHVILMY 180

Query: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           RKL+QFYVKLDE RVLTYQQWILEKEKLS
Sbjct: 181 RKLHQFYVKLDEKRVLTYQQWILEKEKLS 209

[Close]

BLAST of PI0023557 vs. NCBI nr
Match: XP_008442476.1 (PREDICTED: reticulon-like protein B12 isoform X1 [Cucumis melo] >TYK24993.1 reticulon-like protein B12 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 388.7 bits (997), Expect = 3.3e-104
Identity = 202/209 (96.65%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLI 60
           MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLT GILL+TLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIA 120
           SSVLLLLVTIIFLWAKSASILNRPAPPLPEL+LSEDMVNE ASFIRS VNTLLSVSQDIA
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIA 120

Query: 121 MGKDPRLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILMY 180
           MGKDP+LFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVD+HAILMY
Sbjct: 121 MGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMY 180

Query: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           RKLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 209

[Close]

BLAST of PI0023557 vs. NCBI nr
Match: KAA0044144.1 (reticulon-like protein B12 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 384.0 bits (985), Expect = 8.1e-103
Identity = 202/210 (96.19%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLI 60
           MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLT GILL+TLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTAGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILN-RPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDI 120
           SSVLLLLVTIIFLWAKSASILN RPAPPLPEL+LSEDMVNE ASFIRS VNTLLSVSQDI
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNSRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDI 120

Query: 121 AMGKDPRLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILM 180
           AMGKDP+LFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVD+HAILM
Sbjct: 121 AMGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILM 180

Query: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           YRKLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 YRKLYQFYVKLDEMRVLTYQQWILEKEKLS 210

[Close]

BLAST of PI0023557 vs. NCBI nr
Match: XP_004137740.1 (reticulon-like protein B12 [Cucumis sativus] >KGN58801.1 hypothetical protein Csa_001500 [Cucumis sativus])

HSP 1 Score: 382.9 bits (982), Expect = 1.8e-102
Identity = 198/209 (94.74%), Postives = 205/209 (98.09%), Query Frame = 0


Query: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLI 60
           MGSSDRLFC+QRTLHEIVGGGIVADVILWRRKNLT+GILL+TLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCKQRTLHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIA 120
           SSVLLLLVTIIFLWAKSASILNRPAPPLPEL+LSEDMVNE ASFIRSRVN  LSV+QDIA
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIA 120

Query: 121 MGKDPRLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILMY 180
           MGKDPRLFFKVAACLWLISVISGLTD+ITL YTSLLLVLTIPALYEKYEDYVDRHAILMY
Sbjct: 121 MGKDPRLFFKVAACLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMY 180

Query: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           +KLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 KKLYQFYVKLDEMRVLTYQQWILEKEKLS 209

[Close]

BLAST of PI0023557 vs. NCBI nr
Match: XP_016899688.1 (PREDICTED: reticulon-like protein B12 isoform X2 [Cucumis melo])

HSP 1 Score: 380.6 bits (976), Expect = 8.9e-102
Identity = 200/209 (95.69%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MGSSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLI 60
           MGSSDRLFCRQRTLHEIVGGGI  DVILWRRKNLT GILL+TLATWLVFERCGYTLLSLI
Sbjct: 1   MGSSDRLFCRQRTLHEIVGGGI--DVILWRRKNLTAGILLITLATWLVFERCGYTLLSLI 60

Query: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIA 120
           SSVLLLLVTIIFLWAKSASILNRPAPPLPEL+LSEDMVNE ASFIRS VNTLLSVSQDIA
Sbjct: 61  SSVLLLLVTIIFLWAKSASILNRPAPPLPELYLSEDMVNEAASFIRSHVNTLLSVSQDIA 120

Query: 121 MGKDPRLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILMY 180
           MGKDP+LFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVD+HAILMY
Sbjct: 121 MGKDPKLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDKHAILMY 180

Query: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 210
           RKLYQFYVKLDEMRVLTYQQWILEKEKLS
Sbjct: 181 RKLYQFYVKLDEMRVLTYQQWILEKEKLS 207

[Close]

BLAST of PI0023557 vs. TAIR 10
Match: AT3G54120.1 (Reticulon family protein )

HSP 1 Score: 209.9 bits (533), Expect = 1.9e-54
Identity = 107/189 (56.61%), Postives = 146/189 (77.25%), Query Frame = 0


Query: 3   SSDRLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLISS 62
           SSD+LF R RT+HEI+GGGIVADV+LWR+KN++VGI+ VT+A+W+VFE   YT+ +LISS
Sbjct: 4   SSDKLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISS 63

Query: 63  VLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIAMG 122
           VLLLL++I+FLW+KSASILNRP+PPLPE  +SE M  E + ++R  VN LL VS DIAM 
Sbjct: 64  VLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMA 123

Query: 123 KDPRLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILMYRK 182
           +D  L+ KVA  L+L+S+I  L D  TL +TS+L+V+T+PA YE+YEDY+      +  K
Sbjct: 124 RDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFICNK 183

Query: 183 LYQFYVKLD 192
             + Y++L+
Sbjct: 184 TRELYLRLE 192

[Close]

BLAST of PI0023557 vs. TAIR 10
Match: AT3G10915.2 (Reticulon family protein )

HSP 1 Score: 161.4 bits (407), Expect = 7.9e-40
Identity = 90/206 (43.69%), Postives = 134/206 (65.05%), Query Frame = 0


Query: 3   SSD-RLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLIS 62
           SSD RL  RQ T+H+ +GGG  AD++LWRR++L++G+++++   WL+FE  G   LS+ S
Sbjct: 20  SSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSS 79

Query: 63  SVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIAM 122
            VLL+++ I F+ A+ ++  NR    LPEL LSE+MVN  A+  R ++N LL ++ D+ +
Sbjct: 80  DVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTV 139

Query: 123 GKDPRLFFKVAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILMYR 182
           G D RLFFKV  CLWL+S I     + TL Y   +L +TIPALY KY+  VD+    ++R
Sbjct: 140 GNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHR 199

Query: 183 KLYQFYVKLDEMRVLTYQQWILEKEK 208
           +L   Y  +DE  V++   W L K+K
Sbjct: 200 RLSHHYKIVDE-NVISRLSWSLSKDK 224

[Close]

BLAST of PI0023557 vs. TAIR 10
Match: AT3G10915.4 (Reticulon family protein )

HSP 1 Score: 156.8 bits (395), Expect = 2.0e-38
Identity = 90/207 (43.48%), Postives = 134/207 (64.73%), Query Frame = 0


Query: 3   SSD-RLFCRQRTLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLIS 62
           SSD RL  RQ T+H+ +GGG  AD++LWRR++L++G+++++   WL+FE  G   LS+ S
Sbjct: 20  SSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSS 79

Query: 63  SVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIAM 122
            VLL+++ I F+ A+ ++  NR    LPEL LSE+MVN  A+  R ++N LL ++ D+ +
Sbjct: 80  DVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTV 139

Query: 123 GKDPRLFFK-VAACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVDRHAILMY 182
           G D RLFFK V  CLWL+S I     + TL Y   +L +TIPALY KY+  VD+    ++
Sbjct: 140 GNDFRLFFKQVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIH 199

Query: 183 RKLYQFYVKLDEMRVLTYQQWILEKEK 208
           R+L   Y  +DE  V++   W L K+K
Sbjct: 200 RRLSHHYKIVDE-NVISRLSWSLSKDK 225

[Close]

BLAST of PI0023557 vs. TAIR 10
Match: AT3G19460.1 (Reticulon family protein )

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-35
Identity = 71/161 (44.10%), Postives = 110/161 (68.32%), Query Frame = 0


Query: 13  TLHEIVGGGIVADVILWRRKNLTVGILLVTLATWLVFERCGYTLLSLISSVLLLLVTIIF 72
           ++H+ +G G VAD++LWR +   V +L+ +   W +FER GY LLS +S+VLLLLV I F
Sbjct: 12  SVHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFF 71

Query: 73  LWAKSASILNRPAPPLPELHLSEDMVNEVASFIRSRVNTLLSVSQDIAMGKDPRLFFKVA 132
           LWAKSA++LNRP PP+P + + E+  N+ A  +R  +N +LS++ DI + ++P    +V+
Sbjct: 72  LWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVS 131

Query: 133 ACLWLISVISGLTDIITLGYTSLLLVLTIPALYEKYEDYVD 174
             LW IS +  L + +TL Y  +LL L+ P +YEKY+D++D
Sbjct: 132 LVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID 172

[Close]

BLAST of PI0023557 vs. TAIR 10
Match: AT3G10915.5 (Reticulon family protein )

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-35
Identity = 91/229 (39.74%), Postives = 135/229 (58.95%), Query Frame = 0


Query: 3   SSD-RLFCRQRTLHEIVGGG----------------------IVADVILWRRKNLTVGIL 62
           SSD RL  RQ T+H+ +GGG                      I AD++LWRR++L++G++
Sbjct: 20  SSDYRLLGRQITVHQFMGGGKGEFFFPEFHFGYSRKWKTWQFIAADLLLWRRRHLSLGVI 79

Query: 63  LVTLATWLVFERCGYTLLSLISSVLLLLVTIIFLWAKSASILNRPAPPLPELHLSEDMVN 122
           +++   WL+FE  G   LS+ S VLL+++ I F+ A+ ++  NR    LPEL LSE+MVN
Sbjct: 80  IISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVN 139

Query: 123 EVASFIRSRVNTLLSVSQDIAMGKDPRLFFK-VAACLWLISVISGLTDIITLGYTSLLLV 182
             A+  R ++N LL ++ D+ +G D RLFFK V  CLWL+S I     + TL Y   +L 
Sbjct: 140 SAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIGSYISLCTLLYIGTILS 199

Query: 183 LTIPALYEKYEDYVDRHAILMYRKLYQFYVKLDEMRVLTYQQWILEKEK 208
           +TIPALY KY+  VD+    ++R+L   Y  +DE  V++   W L K+K
Sbjct: 200 VTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDE-NVISRLSWSLSKDK 247

The following BLAST results are available for this feature:

BLAST of PI0023557 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M392	2.7e-53	56.61	Reticulon-like protein B12 OS=Arabidopsis thaliana OX=3702 GN=RTNLB12 PE=2 SV=1	[more]
Q8GYH6	1.1e-38	43.69	Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1	[more]
Q9LT71	2.8e-34	44.10	Reticulon-like protein B11 OS=Arabidopsis thaliana OX=3702 GN=RTNLB11 PE=2 SV=1	[more]
Q9FFS0	4.5e-32	37.43	Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1	[more]
Q9SH59	3.8e-31	37.63	Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1	[more]

BLAST of PI0023557 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DMY4	1.6e-104	96.65	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3...	[more]
A0A1S3B6E8	1.6e-104	96.65	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103486331 PE=4 SV=1	[more]
A0A5A7TLS2	3.9e-103	96.19	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]
A0A0A0LFE7	8.7e-103	94.74	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G732580 PE=4 SV=1	[more]
A0A1S4DUP5	4.3e-102	95.69	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103486331 PE=4 SV=1	[more]

BLAST of PI0023557 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904646.1	1.5e-104	96.65	reticulon-like protein B12 [Benincasa hispida]	[more]
XP_008442476.1	3.3e-104	96.65	PREDICTED: reticulon-like protein B12 isoform X1 [Cucumis melo] >TYK24993.1 reti...	[more]
KAA0044144.1	8.1e-103	96.19	reticulon-like protein B12 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_004137740.1	1.8e-102	94.74	reticulon-like protein B12 [Cucumis sativus] >KGN58801.1 hypothetical protein Cs...	[more]
XP_016899688.1	8.9e-102	95.69	PREDICTED: reticulon-like protein B12 isoform X2 [Cucumis melo]	[more]

BLAST of PI0023557 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54120.1	1.9e-54	56.61	Reticulon family protein	[more]
AT3G10915.2	7.9e-40	43.69	Reticulon family protein	[more]
AT3G10915.4	2.0e-38	43.48	Reticulon family protein	[more]
AT3G19460.1	2.0e-35	44.10	Reticulon family protein	[more]
AT3G10915.5	2.0e-35	39.74	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 23..176 e-value: 2.3E-49 score: 167.3
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 23..192 score: 29.858036
IPR045064	Reticulon-like protein, plant	PANTHER	PTHR10994	RETICULON	coord: 5..207
None	No IPR available	PANTHER	PTHR10994:SF65	RETICULON-LIKE PROTEIN B12	coord: 5..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023557.1	PI0023557.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009617	response to bacterium
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane