PI0023524 (gene) Melon (PI 482460) v1

Overview
NamePI0023524
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr08: 2947905 .. 2950673 (-)
RNA-Seq ExpressionPI0023524
SyntenyPI0023524
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACGATTGTTGGCCATTGAATTCCAAGCTTTCTTCCAAACCCAACATCTAAATTGGAAAGTCTTGGTATTGTCTCAAAAGCTCAATAGACTAAAGTTAGGGGAAATCCTTGAAGGTATACAACTTCCTTGTCACTGTATGATGCTTTCTTGAAGAACTGATATGTTAAGATGTAGGATAATCTTCCCCATGGATAGTCTTTGAAGGTTTCTTCGTGATCCAATATTTCTAGATGTTGGAGATTTAGATGTGGTTGTATTGCTGCTTGGGAATTAAAAAGGCTTCTAAGATATAGAGATCAACTAATTTTTTTTTTCAATGAGTCTTCCTCATTGCGTAGTGCTTCGAAAATTCTCTCTGTACCTCTTCTCGTTATAAAGTCGTCATGAGAGAAAATGACATTTTTGAAACATTTTATTTTCTTTCTCCTAAATTTAACTCTGGAAATTTGTGCCCTTCTAATCCAGTGACCAAACAAATTCTTTTTGTCTAAGTTCTGCTATATGTTCATTGAAGTTGAAAGCAAGAACATTGACTTTTTTTGTATGGCATTGCTTCCTTATTAAGAAATTCAGGAATTGTAATGGTATTTTGGCATTTTAATGTTAAGGAAATGGCTAAAAGGGTTGTTCATCAAAACTCTAGAAAGAATTGTTTGGTCTATTTTTTATTGGATATGATTCAATGTCTCTAAATTATAGTATACAGTAATTCTTAGATTTTTGTATTCATCTTCCACAATTATGTCATTTGGATGGTGTTTGACCTATGAAAAATATATAATAAATAGTATGTTATAAACCAAGAGCTAGTGCTAACAGATACACAAATATACAACACTATTCAGATTGATATTGCCAAAGATAGAGCAAACAGACAAAGATACACAAATATAGACAAAGATAGACAAAGATAGAGGACTATACAGACAGATATTGGCAATGTATTTGTTACCTTCACTTTTTTTCTTTCTTAATTTTTTTTCTTCTGCCTTTCATTTAGAATTTATTGCTTTGCTAGTTGATGTTGCTTGCTTCTTGGTCACCATCTATTTACCAAAAGAAGCTAGGGTTAAGTTACACAGAACAAGAGTGATTATTAAATTAAATAAAATAATTATAGATTCAGACTTCTTTGTATGAGAGATAGATTGAGATAGATGATAGAGATAAATGGAGATAGATTGGATTTGGAACCAAAATATTGAGCAATGAACATAATGTCGGAATCAAATTTTGGAAGATTGATGGATAATAAAATGTGAAGAACAAGACGAAGAAGAATTTCGAAAGTTTTGTTGAAGAAGGTAGGTGGAAATGAGATGCACGACAAAAATGATGTGAAGAAGACAAAGTAGTGTGAAGAAGAGAAAAAGTCTGAACAAGAAGCTTCTCCTTTTTATAGCTTGTTGATTTTGATGGTATTTTTGTAATTATGGGAGATTGAGCTTGGCTTCTATTGGACTTCTCAAACATATACAACGATCGTTCAAGTTACTCTACACGATCGTTTGTATCTAAAGCCTTTCATCATCGTTTATGCTAATCTACAAGATTGTGTATCAATTGTATCATTGTCTACACGATCGCGTATGATGATTGTTTACTAGAAGATTACTCATGCTTGTGTGGCCGATTAATCGCATGTTGATTGGGGTATTTTTGGTATTTCCCATTGTGGGACTGTGGACTTTTTACGTTTTCAAAATTGTTCTGTATAGTGTAAATATTTTACATTTTTGTTATATTTTTGAAAAACCCCTTATTTATTTTATAGACTTGTAATGCCCCAAAAATTAAGGTAATTTTTCATTTAATTATCTTAATCTTATTCTATTATGGAATTATTGGGTGTTATTTTTCTTAGGCCTTTTGTTTTAGAATTGATGTTTTGGTGGATTTATAGTTAATTAAATATTTGTTGGTTGAATGTTTAATTAATTATTGGAGTTGTATTTTTGGTGCGTTTATTTGAATGTGTGAATTTAGGAAAACTAAGTTAATTATATTATGTGTATAATTAACTAAGTCGTGGGATTGGATTATTAAGTTGTTGTTGTAAAAATATAATTATAATGGATTGTAATTATATTTGTATTGAGAGGAGTAAGGAAAAAAGTGATTGGATGAAAAAGAGTTAATGAAGTGAGAGAATGTGGTTTAAATGAGGAATGAGGAGGTTTTAATTTTTTTTTAGTAAAAAAAAGGAAAAAGGAAAAAGAATTATTAATAACAATATTATTATTATTAAATGGGCCTTGTTCTGTGTGCATCTCCATTATCCATCTTCTTCTTCTTTACAAAAAAGAACCCTAGTCGCCGCCTCACTGTTTGGCAAAGCCCCACCGTTCGCCACCGTTCGCCGCCAACCCAGCTCAGACGAGTTCGTCCGTCGAGTCGCGCCGCCAAGCCCAGCCGTACGCACAATCCTTCCTTCCGTTCGTGAAGCTGTTCGTTGCGCCACGCCGCAAGTCGCGCCTCATCCTCGTTCGCGCGTCGAAGTCCATTTGTTTCTATTCGTCTGCGAGCTGAAGCCGTCCGCACGCCGAAGTCCGTTCGTCTCTATTCGTCTGCGAGTTGCGTTTGTTCGTCGTGAAGTTCGAGCCGTCTAAGCCGTTTTCTCCTTTTTGCCAAGCCAAACAGTTTTCCTAAGCCATTTGAGTTTCTTTTTTGGTAAGTTTATGGGTTTTGGTATACCCATCAATATTAAGTTTTGGATTCTAATTAATAGTTTTGTTGTTAATTTAGGAATTATCGGATTGGTTAA

mRNA sequence

ATGTCACGATTGTTGGCCATTGAATTCCAAGCTTTCTTCCAAACCCAACATCTAAATTGGAAAGTCTTGGTATTGTCTCAAAAGCTCAATAGACTAAAGTTAGGGGAAATCCTTGAAGTCGCCGCCTCACTGTTTGGCAAAGCCCCACCGTTCGCCACCGTTCGCCGCCAACCCAGCTCAGACGAGTTCGTCCGTCGAGTCGCGCCGCCAAGCCCAGCCGTACGCACAATCCTTCCTTCCGTTCGTGAAGCTGTTCGTTGCGCCACGCCGCAAGTCGCGCCTCATCCTCGTTCGCGCGTCGAAGTCCATTTTTCGAGCCGTCTAAGCCGTTTTCTCCTTTTTGCCAAGCCAAACAGTTTTCCTAAGCCATTTGAGTTTCTTTTTTGGAATTATCGGATTGGTTAA

Coding sequence (CDS)

ATGTCACGATTGTTGGCCATTGAATTCCAAGCTTTCTTCCAAACCCAACATCTAAATTGGAAAGTCTTGGTATTGTCTCAAAAGCTCAATAGACTAAAGTTAGGGGAAATCCTTGAAGTCGCCGCCTCACTGTTTGGCAAAGCCCCACCGTTCGCCACCGTTCGCCGCCAACCCAGCTCAGACGAGTTCGTCCGTCGAGTCGCGCCGCCAAGCCCAGCCGTACGCACAATCCTTCCTTCCGTTCGTGAAGCTGTTCGTTGCGCCACGCCGCAAGTCGCGCCTCATCCTCGTTCGCGCGTCGAAGTCCATTTTTCGAGCCGTCTAAGCCGTTTTCTCCTTTTTGCCAAGCCAAACAGTTTTCCTAAGCCATTTGAGTTTCTTTTTTGGAATTATCGGATTGGTTAA

Protein sequence

MSRLLAIEFQAFFQTQHLNWKVLVLSQKLNRLKLGEILEVAASLFGKAPPFATVRRQPSSDEFVRRVAPPSPAVRTILPSVREAVRCATPQVAPHPRSRVEVHFSSRLSRFLLFAKPNSFPKPFEFLFWNYRIG
Homology
[Close]
BLAST of PI0023524 vs. ExPASy TrEMBL
Match: E5GBK6 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.2e-05
Identity = 28/39 (71.79%), Postives = 33/39 (84.62%), Query Frame = 0 

Query: 1  MSRLLAIEFQAFFQTQHLNWKVLVLSQKLNRLKLGEILE 40
          M +L+A+  QAFFQTQHLNWK+LV SQ+ NRLKLGE LE
Sbjct: 1  MLQLVALLLQAFFQTQHLNWKILVFSQEPNRLKLGETLE 39

[Close]
BLAST of PI0023524 vs. NCBI nr
Match: ADN33848.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 58.2 bits (139), Expect = 6.5e-05
Identity = 28/39 (71.79%), Postives = 33/39 (84.62%), Query Frame = 0 

Query: 1  MSRLLAIEFQAFFQTQHLNWKVLVLSQKLNRLKLGEILE 40
          M +L+A+  QAFFQTQHLNWK+LV SQ+ NRLKLGE LE
Sbjct: 1  MLQLVALLLQAFFQTQHLNWKILVFSQEPNRLKLGETLE 39

The following BLAST results are available for this feature:
BLAST of PI0023524 vs.
Match NameE-valueIdentityDescription
BLAST of PI0023524 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
E5GBK63.2e-0571.79Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
BLAST of PI0023524 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN33848.16.5e-0571.79hypothetical protein [Cucumis melo subsp. melo][more]
BLAST of PI0023524 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0023524.1PI0023524.1mRNA