
PI0023441 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAGACGATGCTTCGCCATTTTATGCCATCTACTAAGGACTACTGCTGGTTTACAGTCTACCGAAATTATCGATGTCGAAGAAATAGTGGCCATGCTCCTTCACGTACTTGTGCACGATGTGAAAAATCGTGTCATTCAACGTGACTTCCTACGGTCCGGTGACACGATTTCACGACATTTCAACCTGGTACTGCTGGCTGTTTTACGCCTTTTTGACGAGCTGTTGGCGAAACCACAACCGGTGACGAACGGTTGCACAGATGCACAATGGAGGTGGTTCGAGGTACGATTTCAATTGCCACAGTCCAAACATCAATACCGCGTATTTTTTCGGTCTCATGATCGCATTATGTACACGTTGCAGAATTACCTTAGTGCACTAGACGACACGTACATCAAGGTGAACTTGATGGCAAGTGAACGACCACGATACAGAACACGAAAGGGTGAAGTTGTAACAAGCGTGCTTGGGGTATGTGATACGAAAAGAGATTTCGTTTTCGTGTTAGCCGGCTGGGAGGGTTCCGCTGCGGACTCGCGCATCCTTCGAGATGCCATTTCTAGACCGAACGGACTGAGTGTGCCGAAGGGTAAATGCAATAACGCAATCCTTCTGAGTACGTTCTTTCCTTCTTGACTATTTGCATTAACAGTGGCGTTCGTTTCACTAGGGTATTACTACTTGTGCGACGCGGGGTACCCTAATGTAAATGGTTTTTTAGCTTCGTACCGAGGGCAACGATACCACCTACAGGAGTGGCACGGAGCGGGCAATTCACCGACAACAGCGAAAGAGTTCTTCAATATGAAGCATTCCTTCGCACGGAATGTCATTGAAAGAGCCTTCAGTCTGTTGAAGGGGCGATGTCAATCCTCCGAGGAAAGTCCTATTACCCCGTCAAAGTTCAAACTCGGACGATACTTACATGTTGTTTACTGAACAATCTCGTAAATAAGGAGATGACGAACAATGACGTACCAGATGACATTGATGAGGGTGACTCTACATACGCCACCACTGGCGGTGAAGTTATTCATTACATAGAGACCTCGAGTGCGTGGAGTCAATGGAGGGACGAGCTTGCCAAATAAATGTTCAGTGATTGGGAGTTGCGTAATCAGTAACACCCAACCTTCAAGTCCCCTAAATTGTAATTATACACCAGTTGGCATATTGTGTGTATTTCCGTACGATGACAATTAAATATATGTATTAACATAGTGATTATTGACGTAATGCAGAATTCGCACCTGGTTTTGTTTGTTACATTAATTTATTCTTATTTTCTTTTCTAGTATGACAACTTCTTCAAGGGCCCCAAAGCACCACTGGACGAAAGAGGAGGATGCCACCCTCGTTGAATGTTTGGTAGAATTGGTATCAGTTGGTGGGCAGAGGTCGAACAACGGAACGTTTAGACCCGATTACGTTAGTCATCTACAGAAAATGATCGCTGAGAGGATGTCGGGTCATTACATAACGGCTTCGACCATAGATTGTCGAATAAAGACTATGAAAAGAGCGTTCCAAGCCATATCTGAAATGAAGGACCCATCGTGTAGTGGGTTCGGTTGGAACGATGAGCTCAAATGCATTATTGTCGAGAAAAACTTGTACGACCATTGGGTGAAGGTATGTTCTTGATTCTATCCATTACTGTTTGTTTCTAATAGTAAATTGCTGATTAGTTCCTGCAACACTTTTACAGAGTCATTCAGCCGCGAATGGCCTCCTAAACAAATCCTTTCCCCATTACGACGACCTTTGCTACGTCTTTGGAAGAGATCGTGCAACAGGAGGTCGCGCTGAAACCTTTGTCGATGTTGGGTCGAACGTGCCTGGAGGGTACGATGGATTTCCCACTTATGACGGGAACGATATGAAGTTCCCCACGATGTACAGTTAGGTACTGGATATGTCACCTGATGACATGATGACATAATGGGCACACGACCTGGTCGGTTGTCTGAGGGTAGGACGGGTTCGAGCGGTTCAAAGAGGAAATGACAAGGACAGGCGTTCGAGGCGACAGAAATTATTCGCAATGCCATGGAATATGCGAACGACCAGCTGAAGGCCATTGCAGAATGGCCCAAAGAACAACGCTAAGATGCAAGCGTGACACATGTGGAAGTCGTTAAACAACTGCAGGGAATCCCGGAGCTGAGTAGACTGGACAGGGTTCGTTGTATGCGTATAGTGATGCGCAATGTGGATGACATGAAAGCATTTCTAGAAGTCCTGGACGAGCTTAAATTGGATTACTGCACGGTCATTCTCTAAGATACCGCTTGACTGCTTCCTCACTTTATTCATATGGGTTGTTTTTGTTGCTTTTTATCATTTCCTTGAGGACATTTGCTCGACTTCACTTCGTATTGTAATTCTATTATTGTACGCTTTTTTCCCACTTTCATAATGAACTTCTGTTTGACTCA ATGGACAGACGATGCTTCGCCATTTTATGCCATCTACTAAGGACTACTGCTGGTTTACAGTCTACCGAAATTATCGATGTCGAAGAAATAGTGGCCATGCTCCTTCACGTACTTGTGCACGATGTGAAAAATCGTGTCATTCAACGTGACTTCCTACGGTCCGGTGACACGATTTCACGACATTTCAACCTGGTACTGCTGGCTGTTTTACGCCTTTTTGACGAGCTGTTGGCGAAACCACAACCGGTGACGAACGGTTGCACAGATGCACAATGGAGTATGACAACTTCTTCAAGGGCCCCAAAGCACCACTGGACGAAAGAGGAGGATGCCACCCTCGTTGAATGTTTGGTAGAATTGGTATCAGTTGGTGGGCAGAGGTCGAACAACGGAACGTTTAGACCCGATTACGTTAGTCATCTACAGAAAATGATCGCTGAGAGGATGTCGGGTCATTACATAACGGCTTCGACCATAGATTGTCGAATAAAGACTATGAAAAGAGCGTTCCAAGCCATATCTGAAATGAAGGACCCATCGTGTAGTGGGTTCGGTTGGAACGATGAGCTCAAATGCATTATTGTCGAGAAAAACTTGTACGACCATTGGGTGAAGAGTCATTCAGCCGCGAATGGCCTCCTAAACAAATCCTTTCCCCATTACGACGACCTTTGCTACGTCTTTGGAAGAGATCGTGCAACAGGAGGTCGCGCTGAAACCTTTGTCGATGTTGGGTCGAACGTGCCTGGAGGGTACGATGGATTTCCCACTTATGACGGGAACGATATGAAGTTCCCCACGATGTACAGTTAGGTACTGGATATGTCACCTGATGACATGATGACATAATGGGCACACGACCTGGTCGGTTGTCTGAGGGTAGGACGGGTTCGAGCGGTTCAAAGAGGAAATGACAAGGACAGGCGTTCGAGGCGACAGAAATTATTCGCAATGCCATGGAATATGCGAACGACCAGCTGAAGGCCATTGCAGAATGGCCCAAAGAACAACGCTAAGATGCAAGCGTGACACATGTGGAAGTCGTTAAACAACTGCAGGGAATCCCGGAGCTGAGTAGACTGGACAGGGTTCGTTGTATGCGTATAGTGATGCGCAATGTGGATGACATGAAAGCATTTCTAGAAGTCCTGGACGAGCTTAAATTGGATTACTGCACGGTCATTCTCTAAGATACCGCTTGACTGCTTCCTCACTTTATTCATATGGGTTGTTTTTGTTGCTTTTTATCATTTCCTTGAGGACATTTGCTCGACTTCACTTCGTATTGTAATTCTATTATTGTACGCTTTTTTCCCACTTTCATAATGAACTTCTGTTTGACTCA ATGGACAGACGATGCTTCGCCATTTTATGCCATCTACTAAGGACTACTGCTGGTTTACAGTCTACCGAAATTATCGATGTCGAAGAAATAGTGGCCATGCTCCTTCACGTACTTGTGCACGATGTGAAAAATCGTGTCATTCAACGTGACTTCCTACGGTCCGGTGACACGATTTCACGACATTTCAACCTGGTACTGCTGGCTGTTTTACGCCTTTTTGACGAGCTGTTGGCGAAACCACAACCGGTGACGAACGGTTGCACAGATGCACAATGGAGTATGACAACTTCTTCAAGGGCCCCAAAGCACCACTGGACGAAAGAGGAGGATGCCACCCTCGTTGAATGTTTGGTAGAATTGGTATCAGTTGGTGGGCAGAGGTCGAACAACGGAACGTTTAGACCCGATTACGTTAGTCATCTACAGAAAATGATCGCTGAGAGGATGTCGGGTCATTACATAACGGCTTCGACCATAGATTGTCGAATAAAGACTATGAAAAGAGCGTTCCAAGCCATATCTGAAATGAAGGACCCATCGTGTAGTGGGTTCGGTTGGAACGATGAGCTCAAATGCATTATTGTCGAGAAAAACTTGTACGACCATTGGGTGAAGAGTCATTCAGCCGCGAATGGCCTCCTAAACAAATCCTTTCCCCATTACGACGACCTTTGCTACGTCTTTGGAAGAGATCGTGCAACAGGAGGTCGCGCTGAAACCTTTGTCGATGTTGGGTCGAACGTGCCTGGAGGGTACGATGGATTTCCCACTTATGACGGGAACGATATGAAGTTCCCCACGATGTACAGTTAG MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQWSMTTSSRAPKHHWTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCIIVEKNLYDHWVKSHSAANGLLNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVPGGYDGFPTYDGNDMKFPTMYS Homology
BLAST of PI0023441 vs. ExPASy TrEMBL
Match: A0A5A7SWD8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold515G00010 PE=3 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 1.5e-78 Identity = 184/457 (40.26%), Postives = 215/457 (47.05%), Query Frame = 0
BLAST of PI0023441 vs. ExPASy TrEMBL
Match: E5GBB2 (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 4.8e-69 Identity = 175/482 (36.31%), Postives = 216/482 (44.81%), Query Frame = 0
BLAST of PI0023441 vs. ExPASy TrEMBL
Match: A0A5D3C620 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G003010 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 6.2e-69 Identity = 141/273 (51.65%), Postives = 178/273 (65.20%), Query Frame = 0
BLAST of PI0023441 vs. ExPASy TrEMBL
Match: E5GCB5 (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 4.0e-68 Identity = 170/476 (35.71%), Postives = 204/476 (42.86%), Query Frame = 0
BLAST of PI0023441 vs. ExPASy TrEMBL
Match: A0A5A7SWU2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00190 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 7.6e-67 Identity = 152/288 (52.78%), Postives = 185/288 (64.24%), Query Frame = 0
BLAST of PI0023441 vs. NCBI nr
Match: KAA0034843.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 302.8 bits (774), Expect = 3.1e-78 Identity = 184/457 (40.26%), Postives = 215/457 (47.05%), Query Frame = 0
BLAST of PI0023441 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 271.2 bits (692), Expect = 9.9e-69 Identity = 175/482 (36.31%), Postives = 216/482 (44.81%), Query Frame = 0
BLAST of PI0023441 vs. NCBI nr
Match: TYK05796.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 270.8 bits (691), Expect = 1.3e-68 Identity = 141/273 (51.65%), Postives = 178/273 (65.20%), Query Frame = 0
BLAST of PI0023441 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 268.1 bits (684), Expect = 8.3e-68 Identity = 170/476 (35.71%), Postives = 204/476 (42.86%), Query Frame = 0
BLAST of PI0023441 vs. NCBI nr
Match: KAA0035078.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK03601.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 263.8 bits (673), Expect = 1.6e-66 Identity = 152/288 (52.78%), Postives = 185/288 (64.24%), Query Frame = 0
BLAST of PI0023441 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 60.1 bits (144), Expect = 3.2e-09 Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 0
BLAST of PI0023441 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). ) HSP 1 Score: 56.6 bits (135), Expect = 3.6e-08 Identity = 27/125 (21.60%), Postives = 57/125 (45.60%), Query Frame = 0
BLAST of PI0023441 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). ) HSP 1 Score: 56.6 bits (135), Expect = 3.6e-08 Identity = 27/125 (21.60%), Postives = 57/125 (45.60%), Query Frame = 0
BLAST of PI0023441 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 1.7e-05 Identity = 29/80 (36.25%), Postives = 41/80 (51.25%), Query Frame = 0
BLAST of PI0023441 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 2.4e-04 Identity = 41/202 (20.30%), Postives = 78/202 (38.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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