PI0023398 (gene) Melon (PI 482460) v1

Overview


Name	PI0023398
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Splicing factor YJU2
Location	chr10: 2814538 .. 2826867 (+)
RNA-Seq Expression	PI0023398
Synteny	PI0023398

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAGAGGAAGGTGCTTAACAAATACTACCCACCGGATTTTGATCCGTCAAAGCTACCAAGGGTTCGTAGACCCAAAAACCAGCAAATGAAGGTTCGTATGATGCTTCCTATGAGCATCCGGTGCAATACTTGTGGTAATTACATATACAAGGGCACAAAGTTTAATTCTCGCAAGGAGGACGTCATTGGTGAGGCAAGAGAATCTCTTTTATATATATTTTTTTATTTTTAACCTAAACTATGTTTGTTCCTTTTGCAATTGATTTTCTGATTTCTCATGTATTTTTTTCCTTTTAATTCAGACATATTTGGGAATTCAAATTTTTAGGTTCTACTTCAAGTGTACCAGATGTTCCGCTGAGCTTACCATTAAAACAGACCCCCAAAACTCAGACTATGTTGTAGAATCAGGAGCCACACGTAATTTTGAACCATGGCGTGAGGAGGATGAAGCTTCTGAGAAGGAGAAATACAAAAGGAATGCGGAAGAGATGGGGGACCCAATGAAATCTTTGGAGAATAGAACCTTGGATTCCAAACGCGAGATGGACATTCTTGCTGCTTTGGATGAGATGAAGTCTATGAAGGTTTTTGTTTTATTACCCTTTGTTTGGTCATTAAGATTTTTGGGTTGTGATTAGTTTCTTGGAGTTGTGGCTTTGAACAAGATTCTAATTTGTTTCTTGATTTTAACATCTTCAATTATTAAGTATAGTTAATTGTTTAAAATAACTTGGTGGGTGTTTGATCCACAGTCAAGACACGCAACTGTGAGTATTGATTCAATGCTTGTGGCTTTGCAACAAACTGCCGCTGAAAAGGTATGTATAGCACTGCCTTCATGAAAACAGTTTGACATGAAATGTATGTGATAAAATATTGAAAAAAGAAGCCTGGATTCTGTCTTTTAATTTCGGGCATCATTTTAACTATTTTAACATATTGAGCAATGTACACTTTGCAGGAAAAGAAGTTAGAAGAAGAAGATGAAGCACTGATAAAATCAATAGTCTTCAATGTGAGTTCATTTTTCCTATATGTTTTTCCTCTTCCATTGAAACCATTTACAGTTGTTTCTTTTTGTTTCCTAGGAATTAAAAATTTTCATATGCATTTGTCAATTCTCTTCTGCAGAACTCAAACAGTTATGTTAGAAGAATTTCAGATGATGAATTTGATGATGGTAGTCATTTTGTTCAACATTTGACTAACAATGATATAACATCGGACTTTAAAGCAAAGGTAAATGAAGTTCTTTTCTATTCCTTATAGATATGAAGATTCGGATGAATAGTGAACGTTAGAGATGTGAATGATACATTTGTAAACCGGATAGGGTCTTTGAGAATCTCAATTATTTAGCTTATTTTTAACTCCTTGACATGTTAACTATTTCTGCAGTTTTTAATCTTCGGTCAATCTGGTGAATAGGATGAATTTTCAGGATTGTCAAAAGTAATTTAAATATGCATAAAGATACTATTTGTGCCCACTAAACATCATTGGAACATTCAAACATGCATATGCCTTCTCAAAAAAAAAAAATGCATATGCCTTTTCTCTAGGCATTTCTATCTAATTGTGAATCTTTGAGTGAAGCATATAACAAAATTGCTACGTGTTTCTTTTTTTGTTTGCTAGCATGAACTTCATTTGAGTGTGTATCTAAATTTGCGGAGGATAAGAACTAAGAAGCGGAGTATGTTTGAGACTTGTCCCTGCTATTGAGTTTTAAAGTATTTGTATTATTTCTTTGCATAGAAGATTGCTAATTAAACCTATTTGTAGCATTCAAATTTGAATGTGCCTTTTCTTATTTGCATTTGAATCCATTTGGATTGCAGAAGCAAAGGGTTTCTGAAGGATCTCCTCATGATCCTACCAGTACTTTAACAAAAGCTGGTTTTCTCCATAGCCGCACGGTTGAAGGTACCCTACCTTTTATTTTTATTCTATCTACTTTTCTAAGGAATATATTGGGAAAATGGTGTGAATGTTATAAATATATACTAATCTTTAATTGATTTGCCCCTTCTCTCAATATTGCAAGAAAAAGTTTTTGGTAGAAGCTAGTGCTGGGTATAAAAAAACTTCTCTATTTTTTCTCTCTTCATGGGAAGGTTACAGTTGATAGGAAGGCCTTTTCAATTCAAAAGAGGGAAATGGTAAAATAATAGTTATTAAGGAACTTTTCCACGATTGTGAATGAATGGAAAGCGTTCTTATAGTTCTTTTGGGTGGGAATTCTCTCTCTACCTCTCTTACCCCAACCCCTACGCTGTTTGTTCTCTCTTTTTTTAATCCTTTCACGTTTCTTATAAGAAAGATTGTTGCTGAGGAATGAGGGGTTCATGGGGAGGAAAATCAAGATGATTTTGGTTTGCAGGTGTGGAATTTCAAGTTGGTAGCACTTAGTTTAAGGTAGGAAATTAGAGTTTACAAGGGATTGGGTTACGATCTCAGATGCGTCTTTTTTCCTCAAAACAAGTCAGTTTATATCTGTGCTTTTCTTTCTCAAAACAATTCGGGAACCCATCTTGAAGGGAAGGTGAAACGAAGGGACATGGAAAATTTCTTGAAAGGCATCACAAAGATTCACCCTTTATCTTCTCCTTTTGTCTTGTGTTCCGTGGGGATGGGAAGGAAACAGTTTTCGGAAGGATAAGTGGATTAGGGATAGCCCTCTCTACTGCTCTCTTTTTCCATGTCTTTACCATTCATCCTCAATGAGGAATCAATCATTTGTTGCTATCTTTCCCCATTCTTTGGATTTTATTGTAGTTTGTCCAATAAGGAAATGGCAAATGTTATTGTTATTCTTTTCTTGAATTGGGAAGTCTCGTTGTAATCCAGATGTTCGTGGTTGGAGTTCGCTCAATTGATGGTTTTTTGTGCAAGTCCTCTTTGCTTGGCAGTCCTTCTCTGTGTGAGTTCTTGGTTTTTGCCTTGTTACAGAAGTTAAAAATTATCAAGAAGGCTAAGTTTTTTACTTGATATGTTATCCACAGAATAGTTCACAAGTTGGATTGGGTGTTGAGCAAAGTGCCCAATTTGTCTGGTTTGTGGTCTTACGTTGTTTGTAGGAGGGAGGCAAAGGATCTAAACCATATATTTTGGAGCTGTGATCTTGCTTATTTGGTTTGGCCTCGTTTTGGCTAGATTTCGTGAGAAAGGTTGTTTCTTGTGGCAAGTAATGTTGTGTGCTATTTTGTGGAGCCTTTGGGTTGAGAGGAACAGTAGAGTTTTTAGAGGGGTTGAGAATTCTTCGAGTGATCTTTTTCCCTTATTAAATTTAATGCTTCGTCGTGGGCTTTTGGTCGAATCTCCTTTTTGTGAGTGTTCCTCGTTGTTCACTTGTGTATTCTTTCAATTTTTTTTCAATGAAAACTTTGTTATTCATGAAAATATCTATCTATATCTATATCTTATATAAAAGAGGCTAGGATGAGAGAATCTTTACATCCCTGTTTTGCTTGTACAATTCTTCATAATTCATATTATGTCCTCCGTCACAATGATTTGAGTCGAGGTGGTTACATGTGCAATGGTGTATTCTTTTATGTATCGGTGTGATCTAGATCATAAATATAAAACATTATGATCTAAAGTAGAGACATGTTGGAATGGACATAAAATATATTATTACTTGTTAGTTATAATCTTTTTAATTTTTTTTCTCCATGCACTAAATAAACTATAAATGTCATATGCATCACTTGTGTTATGGACTAGTATATCTGTGCTATGGAAAAGATATTTATTTTTATAATATTTTTGTAGTTATTGCGTCAAGAAAAAATAATAAAGAATTTCTCTTCTGATCCCATTTCTCTCTTATTGGTCCTCAACCCACCCTCACCTCTGTGAGATCCCTAGTTATAGAATAAAGGAGTATGGATAAAATTAATATGGTTTTAGTTGGGGACATTTTAGTAAATAGTTAGTTAGTTAGGTCTTTTTGCTATATATAGTAGGAGAGGGGTGGGGAAAGGTGTGAAGAATTTTATTAAGGTTTTCCTAATTAGGGAATTTGGGAGAGGATTTTCAGCCCTCTTGAATGTTTGAGGTACATTGTCATTTCTTCTTGATATTGTGTTAGGATCCCACCTAACAAGAATTATCTCAAGAACAAAGGAGGAACTCAAGAGCAGTTAAAAGAACAATCAAATATGAAAATATTTATATATTACAATATCACAAGAACAAGTAACAAGTAACCCCTAGCCTTTTGAGAGGGCTAGACTCTCCCCAATTTCCCAATCAGGGAAATCCCACTACAAAATTCTTCATACCTTTCCCTACTCCCTTCTCTTTCTATTTATAGCAAACATAGGCTAACCATCTTACTAACTAATTACTAATATGCCTCTCTTGAAAGCCATACCATTACTCTACTAATAATCCACTATTTTCCTATCTAGGGGCTTTACAATACTCCGCCCTTCGAAGACACCTTGTCCTCAAGGTATGCTTACAAAATATGATCACAAAAGAATAAACAGGCAGTTTTTTTTTACAAACTTTGAACTCTCCCCGTGCCCGCCTTCTTGGAAGAAATTGTCTTATGTTTAGCCTTGAAAATCAATTGAATTGTAATGATTTCACTTGCATCCAACTCATTAGACAGCCCCAGACAAAATAAACTCCCAAAATCTTCATTCTTTGCACATGGCAAGTGACCCCAGTTAACTGGCTGTAAATCCCCGAGCCCATTTCCCGACACTTGTATTGGTACTTTAATACGAAGCTCTTCTTCTCTAATGGGCTTAGCCCATAATCAACTTTATGCTCCCATCCCCAATTCAATTTCAGGGCCTATGCACCATCTTCCCTAGAATTTACCAATGAGCTTCAGCCAATTCCTGTCCATTTTCAAGTTTCTTTTTTGTCACTCTGACAAATGGGCCTCAATGAATTTAGCAAATTCAAACCCTTTAAACTCCTTTCTTCTTCGTTTATGAGGGCCATTCCCTGTTTTCAGCATCTCATGTCTGGCCCACCATCCATATTCCCATAGGGATTCAACTTCCTTAGATAAAGTCATTAGACTTTTTTTCTTTGAGAGATAATGGGCCTCCTTCACCAATTTTGTAATCAGCCCATTAAGCAACTTCTTGGCCCACTTTTGATTAGATTCTTTTCCCAATTGCCATTACACGTGGTATGATCTAACTATTCTCATCCGTGATGTTTGCATGTGCCAATCCTTCTCCCAGCCTCCAAATTGTTTTTCCAGCCATTTAATACAAATCCAACCTTCACAAAAAATTTGAGCCCCAACTTCTCCACATAAGCAAATCTGGGCCTTTTCATTCAGTTCCAAACTTCCAGCCCATTAAATAAACCAGAATTGCCAATGCAACAGTCTCTAATTCCTGGCCCCACCTTTTGACACTTCACGTGGATAGGAAGATTTTTTCCTTCCTCACGAAAATTTCCCCCTCCTTTCCAAGCTTTCTTCTTCATCCAAAGTTGCTTGACCCTCTCTGCAAGTTTCAAAGCATCCTTCATGAAGATTTTTGGTCTCACTTGCGGCTTCATAGCATCCGCATTCCGACAAACTCCGTTCGTGCCTTAGATCGACTACCGCCATCGCACCACTTCTCCATCTCCTCTTCCCACAATTGGTCTCGCCAGATTCCAATCTTCTTTCTTCGGTCGCCAGTGACTGCCTCAGTTTCTTTCCTCTACCACGACTTCTGTTCAATGCCACCTTGATTTTTCGTCATGACCCAAAACGATTCCATTCGCCAATCTCTTCGCGATCCCTCTACTAATTCCAGTGCCACTTTCTTTCTCGTTGCCACCCCTTCTATTTTCCTTTGATGACCTTGACCGTTGACATTCGTTCGTTCCTCTTCCCTTCCCTAGTTTGACATAGCCCGAACGCCACCAAAGAATAGCAAAGCAAGTACCGTACCTCAAGAAACTCATGGCCCGTGTATGATCCACCTCCCAACGCAACCACTTCAATGAGCTATTTCTTCTATTTTCATCGGTTGTATCTTGGTCGAGTTGTTCCACATAGGCATTGATGATTTGACAAGTCTTCTTTTGTTTCCTTCACTACCATTGACTGTCAATGAGAGCTTCCTTTGTCGTTTCTTCGTCAGTATTGTTCGTTTCCTCTCCCATGCTTTTGCCTCCTCTGATTGATGTTTCCATTTTGGGTATGCTCGATTAGATTTGGCTTCCTCTTCTCTCCATCCTTTTCATGGCTGTTCTTTGATTCCTTTATCTTCAAGTCACTGTTTCGTTTTTCTTTTTCTCCACCACCGTGGAGACCCTCATCACCATTTTTTTTTACTTTTGTTTCCATCGAATCGCATCTACCTTCCCTTTCAACTACCATCAGTGGTGATTTCCTCAACACTAAGCTTGCCACCTTCCCTCTTCCTCGGTGCCTTGTGACGTTTGTGAAAATCCTTCCACTGACAAGCTTTCGATTGTAAGCTCATGGGAGGTTTCAAGTCCTGCTCTGATCACCGGCTTTTTCAGTTTTTCTTCTGGTATGATTATTTGAACTTCAACATTCAATTGTTTCACACGTTGGATCAAGGATTGTAACACGTCTTTGATCTCAACCCTGTCTTTGTCAAGATCATCCAACCTTTCTTCCATCGTTTTTTGAACCTTTTTCTTTTCTTTGATTTCTCGCAACTTCTCCCGTATTTCTCGTTCAATTATCTCAAGAACAAAGGATGAAGTCAAGAATAGTTAAAGAACAATCAAATATGAAAATTATGAAATATATGCTAGAATACCACAATAAACAAGTAACAAGTAACCTCTAGCCTTTCGAGAGGGTTAGACTCTCCCCAATTTCCCAATCAAGGAAATCCCACTACAAAACTTTTCATTCCTTTCCCTACACCCCTCTCCTTCTATTTATAGCAAACATAACCTAACCATCTTACTAACTAATTACTAATATGCCCCTCTTGAAAGCCATACCATTATTCTACTAATAATCCACTATTTTCTTATCTAGGGGCCTTACATATTGCAATAAATATATCTTTATTTAGTGTTCTTTGGTGTGTTCTTTTGTTCTTGACTCTCTTTGTTAGGTGGTATCCTCCTAAAAAAAATGGTATTAGAGCTGTCAATTCGGGAAATCTGTTTTAGTGATGGATTGTGAACGGATGATGAAAGTCTTGTTGGAAATTCTGAGGGATGTTAGATCATTGCAACAAAAGCTTGCTGAATCACTGCAAAGGGATAGAGAAAAAGAAGAAAGCGGACTAGCAACCATCAAAACTGAGGAAGAAGAATCAGCGAAGAAAAGGTCAGAAAAACAGGGAACATTCATGGTGGGTGTGGAATCTGAAACTTCCCATCAGATTACAATTGGAAACTCATCTATGGAAGAATCTGTACAACCATCGCAAGGCATCAAGGAAGAAGGAAAGGTACCAAGCCCTCTTGAAGGGAAATCCCACTGAAGATGGTAGGGAGGGAAGGTGGTTTTGATGAAATTTTGAGGATGGCGAGGAGATAAAACTGATGGAAAACAAGAGAAAAGAGAGATGATGGAAGTGGAAGCGTAACAAATGGAAGTGAGCCAAATTATCAATGGGTGTGAATCAGGCTATTATACAAAGGGAGGTTAGTACTTTCTAAGACTTCAGTACTAATACCATCTCTCACCTTCCATGATTCAGTCTGAGGGGAACACTCAGGTTTTCTTTGGACCTATAAGAGGATGAGTGGTGAACTGCATTGGCTGGGAATGAAAACTGAAATTAAGAAATATGTAGAGCAGTGCGAGATTTGCCAGCAAAACAAGACCGATGCTTCAACCCCAGCTGGCCTCTTACAATTGCTGCCCGTACTTGAGTTAATTTTGGAGGATTGGAACATGGACATTATCTAAGGATTGCCAAAATTAGGGGGATTCAATTCCATAATGGTCATAGTGGACAGGCTCAGTAAATTTGCTTGTTTCATCACACTTAAACACCCTTTCACAGCTAAACAAGTTTCAGAAACTTTTATTGAGAGTGGTAAGCACGGGTCCCGAAGACCATTATCATGGATTGTGGTAAAATATTTTCGAGTAATTTATGGGAGTTATTCTCATCCATGGGTATTACCCTATAGAGAAGCACAACGTTCCACCCCAGACGGACGAGCAAACAGAGAGGGTCAACTGGTGTTTGGAAACTTATCTTCACTGTTTCTGCAATGAACAACCAACTAAATCGAATAAATACATTCCATGGGCGGAGTTATGGTATAATACCACATTTCATGCGTCATCAAAGTCTACCCCGTTTCAAAGTGTATTTGGTCCACCACCTCCGTTAGTGTCATATGGGAGCAGAAAATTGCCCAATAATAGTGCTGAATAGTTATTGATGGATAGGGATTTGGTGATTAATGCCTTGAAGGAAAACTTTGGTGATAGTTCAAAACCGAATGAAGAAACAAGCTGATTTGGATAGGAGAGAGTTGAAATTGAGGTGGGGATGAGGTTTACTTGATGTTGAGGTTGTATCGACAACGCTCTCTAGCAAGGAAGAGAAGTGAGAAATTATCCCCAAAATACTATGGCCCTTACAAGGTAACGGAGGCCATAGGGGAAGTGGCGTATAGATTCAACTACCTCCAGGGACATCTATACATAATGTTTTCCATGTCTCTCAATTAAAGCTCAAGTTGGGACATGAGCAGAGGGTGCAACACATTCCACCGTCCTTGATTGAAGATTTTGAACTGTAAGTGATGCCATAATTAGTTTTGAGAGTTCGCTGGAACAGTGAGTTGCGAGCCAATGAATGGGTAGTTAAATGGAGGGGCTGTCCTGATAGCGAGGCAACTTCGGAGTTAGTCTATTTGATGAACAAGCAATTTCCTTCGTTTCACCTTGAGGACAAGGTGCAATTCGAGGCAAAAGTTCTTGTTAGGTCCCCAATCATTCATACATGTAATAGGAGGAAATCAGTGGAGGGCATGTTGGGAAATAAACAGAAAACAAGAGGAGAGTATTCTGGAGGGGCCCACTAGGGAGAAATATATAAGGAATGTTTTTGGGGATTGGGGAGGTAGGTCATTTTGGGAAAAGCTGCCGAGGCTTTTTGGGAGAAGAATCCAGCCTTCTCGAAGGAGCTGGGAAACGAGTCTTTGCTTACTGTTTTCTTACTATCTAATCTTTTGTTGCTGTTTACATTTTCGTATTGCTCTTTTGTCGTTTGTGAACTCTCTTATATTTCATATTAATATAAAGATAGCAGAGTACTACTGTCTTTGTTTCTCCATTTGTTGTTGGGATTTTCTGATTTTCAGAGGGGAGTCCTAACAGTTTAATCAACAATCCCTTCATTTTCGAAGGGAGTAATGAAGCGGAAGTTGAAGGTGTGCTTTTAAAGAAGAAAGAGTTTTTCAGCGGCTCCCTCTTTAGAACCCAAGAAACATTCAACCTAATTCCTCTGATTTAGTCCAATTGGCTAAGTGTCAGTTTTCTGCCACTCCAAGTTCCACCGTTAGAAGATCTCTCTCCTGCTTCTTCAGCATCGGTTGTCCCTTCTGCAAAGGCCAAGTCAGTGCCCATCGTAGCTTCTTCTAAAAAAGGCCTCAAGCCTCTCCTCTTCATCTGTGTATTTATCTTCATCTCACGCTTCTTCTGCCAGATCCTATCTAAGAGATACTTCCAAAAAGCATACAAAATCAAAGTAACCCCTGCTTCCCTTTAAGACGTTCCCCAAGCATTTTGTTAGAAGGAAGCCGAAGGATCTCTTAAGAAGACACTTGTAAAGACAAAGATGTTGTCAGACCAAAATCTTCTGAATTTTTAAAGGTAAAAGACATTCAGGGCCAAACTTCTTCATCTTCAATTAGGACAGACACCCTGAATTAGAAAAAAGGGTACCTTTAAGGGAAGAATTAATTTTAGATCAAAACCCCAATTCTTTGGAGGTTATTTGCACATGGATTCAAGTTCCTTCTCTTTCAACTGGGTTAGTACCTCAAAGATCCTGCCATCCACATTTTAAATATTTTGTTTTTTCCTTACCTTCCTCAAAAGTAAAAGTTTTGAGAGGCTTTCATTGCCAAACTCCGGGCCCTCAATCCAAAAAGAAATGTACTTAGATTTTGAATCTTCTTTTATTGTGAGCAGTGTCGAAAATGATCATTTAGGATCATTCTTTGAAGGACCCCTTAGAAACTAATCTCAATGATTTGTTTCAGAATGAGGAGGAATTGAATAATGGTAATCAGACCTCTGGAATCCCCTCTCAGTCTAAGCTTTGCGAAATTCCAGCCATTTAAAGTCGATAGTAGAGAAATGCAAACTAGTTTTCGTTTGAGATCTGATTTTAGTCACCCTTTGGTTCAATAATCGGTTACTTTGCGAGGTTTGAAGGTTGCAGATAAAGTGATTGGGATTCAAGTCTCTTTAACACTTAATTGAGAACTAGTACCCCCTAGATTCATTGAAGAAGCTGGGCTCAAGAATTGTTTCCAACCGATTGATCAATTATTATTTTTTAGCAGTTTGTGGTTTTCATCTTAGTGAAGTTTCAGCAAGGATGGCTGTTGTTCTCTTGGAGGTCCCCTCTTCTCTCACCTTGAAGCTTATTTTGGGCAACATATTTTCAATGGTAAGATGCTGAAGATTAGTGTCAAAAGACGTATACGTACAGCAATCAAATTGCTGAAAAAATATTTTTCCAAGGTAATCAAGAAAAGGTAGCCTCCGATCTCATTGTGAGGACTAGAGCTGCACCATTTATACGAAGCAGCATAAGTACAGTAATAGCTGTTATGAAATAGTTGATGGAAAATGCATCGGCAGTTCAAAGATTCAAACTGAGGTTTATGGGACTGCATGTGCTTCAGATTCTTTATCGATTCTGTTGGTTTGGGAGGTTATTTGGGTATTGGATTATTTTGGCAAGACAGTTTTGAGGCTGCCGGTTTGCATCTTCTTGGGGTCTCTCTCTCCTTTCATCTCGAAGATTTGGGCGTGCAAGATTTTAGATTCAAATGGGTTCCTTTTGAGAGAGATTTTAAGTTTTGCTTTGTAGTTAATTTTCTACAGTTGTTTTGTCTTTAAGTGGCTTTGTTTAGCTCGTTATTTTTGGTTGTAATTCACTTTTAGGTTGCCATCATTTTTACGTTGAGGTATAGCCTTTGTTTTAGTCTTCGAATGTATTCTTCCCTAGTTCTCTTTGCTCTTAGTATGATACTCTTCAACTTTGAGCTTAAGTCTCATTTATTATCATTAATAAAGAGGCTTGTTTCCGTTTAAAAAAAAACCAATATTTTAATGTTCTTTGGTGTGTTCTTGTGTTTTTGAGTTTTCTTGTAGGTGGTATCCTAACAATCTTCCCTTTTCACATTTTTCCCAACCGTGGATTGTTGTCCGCATCCCACCTCTTTTCAGCTTCGAAGTAAAGAAATCGGGTGGTTATTTCACAAGGTCCTTCAACCTATGGAGCTCCACCAAACAGCCATTGTTAGCTGTGGTGTAAGGTTGGAAAAAGGATAGAGAGTGGGAACATGGACATTAAGTTGAAAATAAAATCGAAACCTTGAGGCTGTTCTTATGTTAACACCACTAATTTGACTACATTTGAAAAGCTTCTTCAACCTCTTGAATAAAAAGCATCTACCATGGGGTTTTCCTTGGTTTTTTTTCTTTAGTTGATAGGTAAGGGCAACCAATATTACTAGATCTTTTTTGGTACTCTATTCAACCTTGAGGTTCCAACCATATTGATCATTTGTCGTATTTGACTAACCGGTGCAATCATGGTTGTTGCTCTCTTTACAAGTATAACATGTTAGTGTTACAGGCATAGTACATCTTTCTAATAAAGACCTTCCAAGCCACTCTCAATTCCCTCTTTTTTCTTTCATTTTTTTTCTAGCTTAACAATGTACAGAGTAAGGATTTGAACCTTTGGGGTTATGCTTTGTCATTTGAGCTATCTCATGTTGGTTTTATTTATTATTTTAACAGGAAACACTTTTCATTCATACGAATATTGCTATTGCTGCATTAGAATCAAGAAAATAAGTAGAATACTAGTCTATGTCAGAGATGCAATTGCATCAGTTGAGTTCATTAACGAATTGAGTGCTCAAATTTTGATGTATTTGCTCTTTTATGTTACTTTATTGAACAGGTGAAGATGGCAACGTTGGGACGTCTAGTGATACAAAATTTGTTTCGAAATCTTTTCCGGTCATAGTTTCTATTAAAAAGAAACCAGAAGTGACTGCTCGGGTGGAGAATAAACAGAGCTTGCAACATCAAAGCAATGATACCAAAAGTGGACTTGAGTCATTGTGCCAATACGACAGTGACGAAGATTGA

mRNA sequence

ATGGGAGAGAGGAAGGTGCTTAACAAATACTACCCACCGGATTTTGATCCGTCAAAGCTACCAAGGGTTCGTAGACCCAAAAACCAGCAAATGAAGGTTCGTATGATGCTTCCTATGAGCATCCGGTGCAATACTTGTGGTAATTACATATACAAGGGCACAAAGTTTAATTCTCGCAAGGAGGACGTCATTGGTGAGACATATTTGGGAATTCAAATTTTTAGGTTCTACTTCAAGTGTACCAGATGTTCCGCTGAGCTTACCATTAAAACAGACCCCCAAAACTCAGACTATGTTGTAGAATCAGGAGCCACACGTAATTTTGAACCATGGCGTGAGGAGGATGAAGCTTCTGAGAAGGAGAAATACAAAAGGAATGCGGAAGAGATGGGGGACCCAATGAAATCTTTGGAGAATAGAACCTTGGATTCCAAACGCGAGATGGACATTCTTGCTGCTTTGGATGAGATGAAGTCTATGAAGTCAAGACACGCAACTGTGAGTATTGATTCAATGCTTGTGGCTTTGCAACAAACTGCCGCTGAAAAGGAAAAGAAGTTAGAAGAAGAAGATGAAGCACTGATAAAATCAATAGTCTTCAATAACTCAAACAGTTATGTTAGAAGAATTTCAGATGATGAATTTGATGATGGTAGTCATTTTGTTCAACATTTGACTAACAATGATATAACATCGGACTTTAAAGCAAAGAAGCAAAGGGTTTCTGAAGGATCTCCTCATGATCCTACCAGTACTTTAACAAAAGCTGGTTTTCTCCATAGCCGCACGGTTGAAGGTGAAGATGGCAACGTTGGGACGTCTAGTGATACAAAATTTGTTTCGAAATCTTTTCCGGTCATAGTTTCTATTAAAAAGAAACCAGAAGTGACTGCTCGGGTGGAGAATAAACAGAGCTTGCAACATCAAAGCAATGATACCAAAAGTGGACTTGAGTCATTGTGCCAATACGACAGTGACGAAGATTGA

Coding sequence (CDS)

ATGGGAGAGAGGAAGGTGCTTAACAAATACTACCCACCGGATTTTGATCCGTCAAAGCTACCAAGGGTTCGTAGACCCAAAAACCAGCAAATGAAGGTTCGTATGATGCTTCCTATGAGCATCCGGTGCAATACTTGTGGTAATTACATATACAAGGGCACAAAGTTTAATTCTCGCAAGGAGGACGTCATTGGTGAGACATATTTGGGAATTCAAATTTTTAGGTTCTACTTCAAGTGTACCAGATGTTCCGCTGAGCTTACCATTAAAACAGACCCCCAAAACTCAGACTATGTTGTAGAATCAGGAGCCACACGTAATTTTGAACCATGGCGTGAGGAGGATGAAGCTTCTGAGAAGGAGAAATACAAAAGGAATGCGGAAGAGATGGGGGACCCAATGAAATCTTTGGAGAATAGAACCTTGGATTCCAAACGCGAGATGGACATTCTTGCTGCTTTGGATGAGATGAAGTCTATGAAGTCAAGACACGCAACTGTGAGTATTGATTCAATGCTTGTGGCTTTGCAACAAACTGCCGCTGAAAAGGAAAAGAAGTTAGAAGAAGAAGATGAAGCACTGATAAAATCAATAGTCTTCAATAACTCAAACAGTTATGTTAGAAGAATTTCAGATGATGAATTTGATGATGGTAGTCATTTTGTTCAACATTTGACTAACAATGATATAACATCGGACTTTAAAGCAAAGAAGCAAAGGGTTTCTGAAGGATCTCCTCATGATCCTACCAGTACTTTAACAAAAGCTGGTTTTCTCCATAGCCGCACGGTTGAAGGTGAAGATGGCAACGTTGGGACGTCTAGTGATACAAAATTTGTTTCGAAATCTTTTCCGGTCATAGTTTCTATTAAAAAGAAACCAGAAGTGACTGCTCGGGTGGAGAATAAACAGAGCTTGCAACATCAAAGCAATGATACCAAAAGTGGACTTGAGTCATTGTGCCAATACGACAGTGACGAAGATTGA

Protein sequence

MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEKEKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHFVQHLTNNDITSDFKAKKQRVSEGSPHDPTSTLTKAGFLHSRTVEGEDGNVGTSSDTKFVSKSFPVIVSIKKKPEVTARVENKQSLQHQSNDTKSGLESLCQYDSDED

Homology

[Close]

BLAST of PI0023398 vs. ExPASy Swiss-Prot
Match: Q54WR5 (Splicing factor YJU2 OS=Dictyostelium discoideum OX=44689 GN=yju2 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.7e-57
Identity = 136/336 (40.48%), Postives = 201/336 (59.82%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKV++KYYPPDFDPSK+ +++  +    KV  MLPMSIRCNTCG YI +GTKFN++K
Sbjct: 1   MGERKVISKYYPPDFDPSKVAKIKVKRPTFTKVTTMLPMSIRCNTCGEYIGRGTKFNAKK 60

Query: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           E V  E YLGI+I+RF+ +C +C+AELTIKTDP+NS+YV ESGATRN+EPW+E DE    
Sbjct: 61  ETVQNEDYLGIKIYRFFLRCKKCAAELTIKTDPKNSEYVCESGATRNYEPWKETDEEKSN 120

Query: 121 EKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180
              K   EE  D M +LENRTL+SKREM++L AL+E+KS+ SR++ +  + +L    Q  
Sbjct: 121 RMTKEQEEEQ-DAMIALENRTLESKREMEMLDALEEIKSLNSRNSEIDTEQLLEYNLQKQ 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHFVQHLTNNDITSDFKAKKQR 240
             +EK  +EED+ L+KSI FNN N    ++  ++ +D +    ++ +N I       K+ 
Sbjct: 181 ELEEKLQDEEDDLLVKSI-FNNKN----KLELNQINDNNSINNNIDSNKI-------KRI 240

Query: 241 VSEGSPHDPTSTLTKAGFLHSRTVEGEDGNVGTSSDTKFVSKSFPVIVSIKKKPEVTAR- 300
            ++    D  ++L      +++ +   + N   + +T  +S +     +  +K  +    
Sbjct: 241 ENDDDDGDKFNSLFSNNNKNNKNIINNNNNNNNNINTTSISNTIETTPTTNQKTSILGNK 300

Query: 301 ---VENKQSLQHQSNDTKSGLES----LCQYDSDED 329
              V NKQ      N+  S   S    +  Y  DE+
Sbjct: 301 VKVVINKQEEPIPKNNNNSEPNSFSSFMSAYSDDEE 323

[Close]

BLAST of PI0023398 vs. ExPASy Swiss-Prot
Match: A8WHR3 (Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 7.1e-56
Identity = 109/217 (50.23%), Postives = 152/217 (70.05%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RK
Sbjct: 1   MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60

Query: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           E V  E YLG+ IFRFY KCTRC AE+T KTDP+N+DY +E GATRNF+  +  +E  +K
Sbjct: 61  ETVQNELYLGLPIFRFYIKCTRCLAEITFKTDPENTDYAMEHGATRNFQAEKLIEEEEKK 120

Query: 121 EKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180
            + +R  EE+ +PMK LENRT DSK EM++L  L E+K +  R A V  + ML   ++  
Sbjct: 121 IQQEREDEELNNPMKVLENRTRDSKLEMEVLENLQELKELNQRQAQVDFEGMLGQYKELE 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDD 218
             ++++ +EEDE   K ++     + V+R+ D + ++
Sbjct: 181 QRQKQREQEEDEQETKEML---ERALVKRLRDSDSEE 214

[Close]

BLAST of PI0023398 vs. ExPASy Swiss-Prot
Match: Q9BW85 (Splicing factor YJU2 OS=Homo sapiens OX=9606 GN=YJU2 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 4.6e-55
Identity = 105/192 (54.69%), Postives = 141/192 (73.44%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RK
Sbjct: 1   MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60

Query: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           E V  E YLG+ IFRFY KCTRC AE+T KTDP+N+DY +E GATRNF+  +  +E  ++
Sbjct: 61  ETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKR 120

Query: 121 EKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180
            + +R  EE+ +PMK LENRT DSK EM++L  L E+K +  R A V  ++ML   + + 
Sbjct: 121 VQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQHRLSE 180

Query: 181 AEKEKKLEEEDE 193
            E+ ++ +EEDE
Sbjct: 181 EERRRQQQEEDE 192

[Close]

BLAST of PI0023398 vs. ExPASy Swiss-Prot
Match: Q9D6J3 (Splicing factor YJU2 OS=Mus musculus OX=10090 GN=Yju2 PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 7.8e-55
Identity = 109/217 (50.23%), Postives = 151/217 (69.59%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RK
Sbjct: 1   MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60

Query: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           E V  E YLG+ IFRFY KCTRC AE+T KTDP+N+DY +E GATRNF+  +  +E  ++
Sbjct: 61  ETVQNEAYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKR 120

Query: 121 EKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180
            + +R  EE+ +PMK LENRT DSK EM++L  L E+K +  R A V  ++ML   + + 
Sbjct: 121 VQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQHRMSQ 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDD 218
            + +++ EEEDE    +++      + R + D E +D
Sbjct: 181 EQWQQQQEEEDERETAALL--EEARHRRLLEDSESED 215

[Close]

BLAST of PI0023398 vs. ExPASy Swiss-Prot
Match: Q9P7C5 (Splicing factor YJU2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cwf16 PE=1 SV=2)

HSP 1 Score: 187.2 bits (474), Expect = 3.0e-46
Identity = 104/226 (46.02%), Postives = 143/226 (63.27%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQ-----QMKVRMMLPMSIRCNTCGNYIYKGTK 60
           M ERKVLNKY PPD+DPS  P  ++ K Q     ++ VR+M P S+RC+TCG YIYKG K
Sbjct: 1   MSERKVLNKYIPPDYDPSIRPPKKKKKFQGPNGGKLTVRLMTPFSMRCHTCGEYIYKGKK 60

Query: 61  FNSRKEDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREE- 120
           FN+RKE   GE Y  I I RFY +CTRC+AE+T  TDP+++DY  ESGA+RN+EPW E+ 
Sbjct: 61  FNARKEKT-GEKYFSIDILRFYIRCTRCAAEITFITDPKHADYAAESGASRNYEPWHEKR 120

Query: 121 -DEASEKEKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML 180
             E  E E  +RN     D M+ LE +TLD+KR+M I  ALDE++   +R + V+ID  +
Sbjct: 121 LQEYEENELAERNDIPEEDEMEKLEQKTLDTKRQMQISDALDELREKSARRSRVNIDDAI 180

Query: 181 VALQQTA--------AEKEKKLEEEDEALIKSIVFNNSNSYVRRIS 212
             L++ A        ++K K  EEE +   KS+  +     +RR++
Sbjct: 181 ALLKEDAYGSIEEEESKKRKFEEEEIDREAKSLFSSQDGEIIRRLN 225

[Close]

BLAST of PI0023398 vs. ExPASy TrEMBL
Match: A0A6J1HNB0 (Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111465203 PE=3 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 5.3e-155
Identity = 288/329 (87.54%), Postives = 305/329 (92.71%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM VRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           EDVIGETYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY VESGATRNFEPWR+EDEASEK
Sbjct: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120

Query: 121 EKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180
           EK+KRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHFVQHLTNNDITSDFKAKKQR 240
           AEKEKKLEEEDEALIKSIVFNNSN+YVRRISDDEFDD +HFVQH T+ND T DF+AKKQ+
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVRRISDDEFDDNNHFVQHSTSNDETFDFRAKKQK 240

Query: 241 VSEGSPHDPTSTLTKAGFLHSRTVEGEDGNVGTSSDTKFVSKSFPVIVSIKKKPEVTARV 300
           +SE  PHDPT+T TKA  LH+   EG DGNVGTSS +KFVSKS PV VSI KKPE+TARV
Sbjct: 241 ISEEFPHDPTNTSTKAAVLHALKGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300

Query: 301 ENKQSLQHQSNDTKSGLESLCQ-YDSDED 329
           ENKQSL+ Q +DT +GLESLCQ Y SDED
Sbjct: 301 ENKQSLEVQISDTNTGLESLCQYYASDED 329

[Close]

BLAST of PI0023398 vs. ExPASy TrEMBL
Match: A0A6J1E6Q8 (Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111431206 PE=3 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 1.2e-154
Identity = 287/329 (87.23%), Postives = 305/329 (92.71%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM VRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           EDVIGETYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY VESGATRNFEPWR+EDEASEK
Sbjct: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120

Query: 121 EKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180
           EK+KRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML ALQQTA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHFVQHLTNNDITSDFKAKKQR 240
           AEKEKKLEEEDEALIKSIVFN SN+YVRRISDDEFDD +HFVQH TNND T DF+AKKQ+
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240

Query: 241 VSEGSPHDPTSTLTKAGFLHSRTVEGEDGNVGTSSDTKFVSKSFPVIVSIKKKPEVTARV 300
           +SE  PHDPT+T TKA  L++ T EG DGNVGTSS +KFVSKS PV VSI KKPE+TARV
Sbjct: 241 ISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300

Query: 301 ENKQSLQHQSNDTKSGLESLCQ-YDSDED 329
           ENKQSL+ Q++DT +GLESLCQ Y SDED
Sbjct: 301 ENKQSLEVQTSDTNTGLESLCQYYASDED 329

[Close]

BLAST of PI0023398 vs. ExPASy TrEMBL
Match: A0A6J1EW00 (Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111438528 PE=3 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 7.2e-144
Identity = 271/329 (82.37%), Postives = 290/329 (88.15%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+KVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           EDV+GETYLGIQ+FRFYFKCTRCSAELTIKTDPQNSDY+VESGATRNFEPWREEDE SEK
Sbjct: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120

Query: 121 EKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180
           EK+KR+AEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML+ALQQTA
Sbjct: 121 EKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHFVQHLTNNDITSDFKAKKQR 240
           AEKEKKLEEEDEALIKSIVFNNSN+YV+RISDD+FDD S   Q  TNND TS+  AKKQ+
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAKKQK 240

Query: 241 VSEGSPHDPTSTLTKAGFLHSRTVEGEDGNVGTSSDTKFVSKSFPVIVSIKKKPEVTARV 300
           +SE SPHD  +T TK   LHS T EG DGN  TS D K +SKS  + VSI KKPE+T RV
Sbjct: 241 LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSGDAKLISKSLSIKVSIIKKPELTPRV 300

Query: 301 ENKQSLQHQSNDTKSGLESLCQ-YDSDED 329
           E KQ L+ Q  DT +GLESLCQ Y SDED
Sbjct: 301 ETKQKLEVQIGDTNNGLESLCQNYGSDED 329

[Close]

BLAST of PI0023398 vs. ExPASy TrEMBL
Match: A0A6J1HYT1 (Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111469322 PE=3 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 1.2e-143
Identity = 272/329 (82.67%), Postives = 290/329 (88.15%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+KVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           EDV+GETYLGIQ+FRFYFKCTRCSAELTIKTDPQNSDY+VESGATRNFEPWREEDE SEK
Sbjct: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120

Query: 121 EKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180
           EK+KRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML+ALQQTA
Sbjct: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHFVQHLTNNDITSDFKAKKQR 240
           AEKEKKLEEEDEALIKSIVFNNSN+YVRRISDD+FD  S   Q  TNND TS+  AKKQ+
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVRRISDDQFDGSSPSEQPSTNNDKTSNINAKKQK 240

Query: 241 VSEGSPHDPTSTLTKAGFLHSRTVEGEDGNVGTSSDTKFVSKSFPVIVSIKKKPEVTARV 300
           +SE SPHD  +T  K   LHS T EG DGN  TSSD KF+SKS  + VSI KKPE+T RV
Sbjct: 241 LSEESPHDDPTTTPKDVILHSLTGEGGDGNGATSSDAKFISKSLSIKVSIIKKPELTPRV 300

Query: 301 ENKQSLQHQSNDTKSGLESLCQ-YDSDED 329
           E KQ L+ Q  DT +GLESLCQ Y S+ED
Sbjct: 301 ETKQKLEVQIGDTNNGLESLCQNYGSEED 329

[Close]

BLAST of PI0023398 vs. ExPASy TrEMBL
Match: A0A6J1E3A4 (Splicing factor YJU2 OS=Momordica charantia OX=3673 GN=LOC111025649 PE=3 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 1.2e-143
Identity = 278/329 (84.50%), Postives = 291/329 (88.45%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+KVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK
Sbjct: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120

Query: 121 EKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180
           EK+KRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML+ALQQTA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHFVQHLTNNDITSDFKAKKQR 240
           AEKEKKLEEEDEALIKSIVFNNS  YVRRI DDEFDDGSHFV   TNND TS   AKKQ+
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSKDYVRRIPDDEFDDGSHFV---TNNDKTSGTSAKKQK 240

Query: 241 VSEGSPHDPTSTLTKAGFLHSRTVEGEDGNVGTSSDTKFVSKSFPVIVSIKKKPEVTARV 300
           V E SPHDPTST TKA  L+S T EG D +VGTS D +FVSKS  + VSI KKPE+T  V
Sbjct: 241 VLEESPHDPTSTSTKAVILNSLTDEGNDSSVGTSDDARFVSKSLSIKVSIIKKPELTNPV 300

Query: 301 ENKQSLQHQSNDTKSGLESLCQ-YDSDED 329
           +N+     Q+ D  +GL SLCQ Y SDED
Sbjct: 301 DNE-----QTEDMNTGLLSLCQNYVSDED 321

[Close]

BLAST of PI0023398 vs. NCBI nr
Match: XP_004149128.1 (splicing factor YJU2 [Cucumis sativus] >KGN50783.2 hypothetical protein Csa_018408 [Cucumis sativus])

HSP 1 Score: 604.7 bits (1558), Expect = 4.6e-169
Identity = 313/328 (95.43%), Postives = 319/328 (97.26%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK
Sbjct: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120

Query: 121 EKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180
           EK+KRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQ+TA
Sbjct: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHFVQHLTNNDITSDFKAKKQR 240
           AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGS  VQHLTNNDI SDFKAKKQR
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGS-IVQHLTNNDIASDFKAKKQR 240

Query: 241 VSEGSPHDPTSTLTKAGFLHSRTVEGEDGNVGTSSDTKFVSKSFPVIVSIKKKPEVTARV 300
           VSEGSPHDPTST +KAGFLHSR  EGEDGN+GTS+DTKFVSKSFPVIVSIKKKPEVTARV
Sbjct: 241 VSEGSPHDPTSTSSKAGFLHSRMGEGEDGNIGTSTDTKFVSKSFPVIVSIKKKPEVTARV 300

Query: 301 ENKQSLQHQSNDTKSGLESLCQYDSDED 329
           ENKQSLQ QSN TK+GLESLCQYDSDED
Sbjct: 301 ENKQSLQLQSNGTKTGLESLCQYDSDED 327

[Close]

BLAST of PI0023398 vs. NCBI nr
Match: XP_031745804.1 (LOW QUALITY PROTEIN: splicing factor YJU2-like [Cucumis sativus])

HSP 1 Score: 602.4 bits (1552), Expect = 2.3e-168
Identity = 312/328 (95.12%), Postives = 318/328 (96.95%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           EDVIGETYLGIQIFRFYFKCTRCSAEL IKTDPQNSDYVVESGATRNFEPWREEDEASEK
Sbjct: 61  EDVIGETYLGIQIFRFYFKCTRCSAELXIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120

Query: 121 EKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180
           EK+KRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQ+TA
Sbjct: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHFVQHLTNNDITSDFKAKKQR 240
           AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGS  VQHLTNNDI SDFKAKKQR
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGS-IVQHLTNNDIASDFKAKKQR 240

Query: 241 VSEGSPHDPTSTLTKAGFLHSRTVEGEDGNVGTSSDTKFVSKSFPVIVSIKKKPEVTARV 300
           VSEGSPHDPTST +KAGFLHSR  EGEDGN+GTS+DTKFVSKSFPVIVSIKKKPEVTARV
Sbjct: 241 VSEGSPHDPTSTSSKAGFLHSRMGEGEDGNIGTSTDTKFVSKSFPVIVSIKKKPEVTARV 300

Query: 301 ENKQSLQHQSNDTKSGLESLCQYDSDED 329
           ENKQSLQ QSN TK+GLESLCQYDSDED
Sbjct: 301 ENKQSLQLQSNGTKTGLESLCQYDSDED 327

[Close]

BLAST of PI0023398 vs. NCBI nr
Match: XP_038895471.1 (splicing factor YJU2 [Benincasa hispida] >XP_038895472.1 splicing factor YJU2 [Benincasa hispida])

HSP 1 Score: 579.3 bits (1492), Expect = 2.1e-161
Identity = 299/328 (91.16%), Postives = 310/328 (94.51%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEA EK
Sbjct: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEAFEK 120

Query: 121 EKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180
           EK+KRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHA VSIDSML+ALQ+T 
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLMALQRTT 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHFVQHLTNNDITSDFKAKKQR 240
           AEKEKKLEEEDEALIKSIVFNNSN++VRRISD+EFDD SHFVQHLTNN  TSDFKAKKQ+
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNFVRRISDEEFDDSSHFVQHLTNNVKTSDFKAKKQK 240

Query: 241 VSEGSPHDPTSTLTKAGFLHSRTVEGEDGNVGTSSDTKFVSKSFPVIVSIKKKPEVTARV 300
           VSE SPHDPTST  KA  L+S T EG+DGNVGTSSD KFVSKS PVIVSIKKKPE+TARV
Sbjct: 241 VSEESPHDPTSTSEKAVVLNSLTGEGKDGNVGTSSDAKFVSKSLPVIVSIKKKPELTARV 300

Query: 301 ENKQSLQHQSNDTKSGLESLCQYDSDED 329
           ENKQSL  QSNDT +GLESLCQYDSDED
Sbjct: 301 ENKQSLDIQSNDTNTGLESLCQYDSDED 328

[Close]

BLAST of PI0023398 vs. NCBI nr
Match: KAG6577830.1 (Splicing factor YJU2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 558.9 bits (1439), Expect = 2.9e-155
Identity = 288/329 (87.54%), Postives = 306/329 (93.01%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM VRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           EDVIGETYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY VESGATRNFEPWR+EDEASEK
Sbjct: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120

Query: 121 EKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180
           EK+KRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML+ALQQTA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHFVQHLTNNDITSDFKAKKQR 240
           AEKEKKLEEEDEALIKSIVFN SN+YVRRISDDEFDD +HFVQH TNND T DF+AKKQ+
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240

Query: 241 VSEGSPHDPTSTLTKAGFLHSRTVEGEDGNVGTSSDTKFVSKSFPVIVSIKKKPEVTARV 300
           +SE  PHDPT+T TKA  LH+ T EG DGNVGTSS +KFVSKS PV VSI KKPE+TARV
Sbjct: 241 ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300

Query: 301 ENKQSLQHQSNDTKSGLESLCQ-YDSDED 329
           ENKQSL+ Q++DT +GLESLCQ Y SDED
Sbjct: 301 ENKQSLEVQTSDTNTGLESLCQYYASDED 329

[Close]

BLAST of PI0023398 vs. NCBI nr
Match: XP_023552633.1 (coiled-coil domain-containing protein 94 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 558.1 bits (1437), Expect = 4.9e-155
Identity = 288/329 (87.54%), Postives = 305/329 (92.71%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM VRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           EDVIGETYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY VESGATRNFEPWR+EDEASEK
Sbjct: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120

Query: 121 EKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180
           EK+KRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML+ALQQTA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSHFVQHLTNNDITSDFKAKKQR 240
           AEKEKKLEEEDEALIKSIVFN SN+YVRRISDDEFDD +HFVQH TNND T DF+AKKQ+
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240

Query: 241 VSEGSPHDPTSTLTKAGFLHSRTVEGEDGNVGTSSDTKFVSKSFPVIVSIKKKPEVTARV 300
           +SE  PHDPT+T TKA  LH+ T EG DGNVGTSS +KFVSKS PV VSI KKPE+TARV
Sbjct: 241 ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300

Query: 301 ENKQSLQHQSNDTKSGLESLCQ-YDSDED 329
           ENKQSL+ Q +DT +GLESLCQ Y SDED
Sbjct: 301 ENKQSLEVQPSDTNTGLESLCQYYASDED 329

[Close]

BLAST of PI0023398 vs. TAIR 10
Match: AT1G17130.1 (Family of unknown function (DUF572) )

HSP 1 Score: 364.4 bits (934), Expect = 9.7e-101
Identity = 209/342 (61.11%), Postives = 251/342 (73.39%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDP+KL R+RRPKNQQ+KVRMMLPMS+RC TCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPAKLQRLRRPKNQQIKVRMMLPMSVRCGTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           EDVIGETYLGIQIFRFYFKCT+CSAELT+KTDPQNSDY+VESGA+RN+EPWR EDE  +K
Sbjct: 61  EDVIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGASRNYEPWRAEDEEVDK 120

Query: 121 EKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180
           +K KR+AEEMGD MKSLENRTLDSKREMDI+AALDEMKSMKSRHATVS+D+ML ALQ+T 
Sbjct: 121 DKQKRDAEEMGDAMKSLENRTLDSKREMDIIAALDEMKSMKSRHATVSVDAMLEALQRTG 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDG------SHFVQHLTNNDITSDF 240
           AEK K++EEEDEA+IKSI F      +RRI+D+E DD         +         +S  
Sbjct: 181 AEKVKRIEEEDEAVIKSI-FGKQKEVIRRIADEEIDDDYDDDDIDDYPSLQKEKKGSSSD 240

Query: 241 KAKKQRVSEGSPHDPTSTLTKAGFLHSRTVEGEDGNVGTSSDTKFVSKSFPVIVSIKKKP 300
            +KK++ +E SP +PT  LT +   + +  + +       + +K   KS  + V IKK+P
Sbjct: 241 LSKKRKATEVSPSNPTDILTSSSAENPKEPKKQ-------AISKQPFKSVHIKV-IKKQP 300

Query: 301 EVT-------ARVENKQSLQHQSNDTKSGLESLCQ-YDSDED 329
           + T       A+ E K+S         + L SL Q Y SDED
Sbjct: 301 QPTSSSTPAPAKPEEKKS----DGAANTSLASLFQNYGSDED 329

[Close]

BLAST of PI0023398 vs. TAIR 10
Match: AT1G17130.2 (Family of unknown function (DUF572) )

HSP 1 Score: 357.5 bits (916), Expect = 1.2e-98
Identity = 209/349 (59.89%), Postives = 251/349 (71.92%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDP+KL R+RRPKNQQ+KVRMMLPMS+RC TCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPAKLQRLRRPKNQQIKVRMMLPMSVRCGTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGE-------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWRE 120
           EDVIGE       TYLGIQIFRFYFKCT+CSAELT+KTDPQNSDY+VESGA+RN+EPWR 
Sbjct: 61  EDVIGENFSFDVQTYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGASRNYEPWRA 120

Query: 121 EDEASEKEKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML 180
           EDE  +K+K KR+AEEMGD MKSLENRTLDSKREMDI+AALDEMKSMKSRHATVS+D+ML
Sbjct: 121 EDEEVDKDKQKRDAEEMGDAMKSLENRTLDSKREMDIIAALDEMKSMKSRHATVSVDAML 180

Query: 181 VALQQTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDG------SHFVQHLTN 240
            ALQ+T AEK K++EEEDEA+IKSI F      +RRI+D+E DD         +      
Sbjct: 181 EALQRTGAEKVKRIEEEDEAVIKSI-FGKQKEVIRRIADEEIDDDYDDDDIDDYPSLQKE 240

Query: 241 NDITSDFKAKKQRVSEGSPHDPTSTLTKAGFLHSRTVEGEDGNVGTSSDTKFVSKSFPVI 300
              +S   +KK++ +E SP +PT  LT +   + +  + +       + +K   KS  + 
Sbjct: 241 KKGSSSDLSKKRKATEVSPSNPTDILTSSSAENPKEPKKQ-------AISKQPFKSVHIK 300

Query: 301 VSIKKKPEVT-------ARVENKQSLQHQSNDTKSGLESLCQ-YDSDED 329
           V IKK+P+ T       A+ E K+S         + L SL Q Y SDED
Sbjct: 301 V-IKKQPQPTSSSTPAPAKPEEKKS----DGAANTSLASLFQNYGSDED 336

[Close]

BLAST of PI0023398 vs. TAIR 10
Match: AT2G32050.1 (Family of unknown function (DUF572) )

HSP 1 Score: 245.0 bits (624), Expect = 8.6e-65
Identity = 128/217 (58.99%), Postives = 161/217 (74.19%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERK LNKYYPP+FDP ++PR+R+PKNQQ K+R M+P+ IRCNTCGNY+ +GTK N R+
Sbjct: 1   MGERKGLNKYYPPNFDPKQIPRIRKPKNQQRKIRSMVPLRIRCNTCGNYMSEGTKINCRE 60

Query: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           E+VIGETYLGI+I RFYFKC++C  EL +KTDP+NS YV ESGAT  ++   EE++    
Sbjct: 61  ENVIGETYLGIKIHRFYFKCSKCCTELILKTDPKNSSYVAESGATCVYDQHEEEEQ---- 120

Query: 121 EKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180
                 AE+ GD M SLE RTL SKRE+D++AALDEMKSMKSR  +VS+DSML  L +  
Sbjct: 121 ------AEDGGDRMSSLEKRTLVSKREVDVMAALDEMKSMKSRRVSVSVDSMLEDLSKRH 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDD 218
            E+E+  +EED ALIKS  F       RRI D+E D+
Sbjct: 181 KEEEEVAKEEDAALIKSTKFGKQ----RRIVDEETDE 203

[Close]

BLAST of PI0023398 vs. TAIR 10
Match: AT3G43250.1 (Family of unknown function (DUF572) )

HSP 1 Score: 225.7 bits (574), Expect = 5.4e-59
Identity = 122/214 (57.01%), Postives = 157/214 (73.36%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERK LNKYYPPDFDP K+ R+++PKNQQ K+R MLP+ +RCNTCGNY+ +GTKFN R+
Sbjct: 1   MGERKNLNKYYPPDFDPKKIHRIKKPKNQQKKIRFMLPVRVRCNTCGNYMSEGTKFNCRQ 60

Query: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           EDVI ETYLG++I RFY KCT+C AELTIKTDP+N  Y VESGA+  +     ED   EK
Sbjct: 61  EDVITETYLGLKIHRFYIKCTKCLAELTIKTDPKNHSYTVESGASCLYN--GHEDIEEEK 120

Query: 121 EKYKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180
           +K   NA      ++SLENRT+ SKRE++++A+LDE+KSMKSR A++S+D ML  L +  
Sbjct: 121 KKKHENA------LESLENRTVVSKREIEVMASLDELKSMKSRRASLSVDYMLEDLSRRK 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDE 215
            ++E+ +EE  E LIKSI F       +RI  DE
Sbjct: 181 KQEEENVEE--ELLIKSIKFG------KRIRTDE 198

[Close]

BLAST of PI0023398 vs. TAIR 10
Match: AT2G29430.1 (Family of unknown function (DUF572) )

HSP 1 Score: 102.4 bits (254), Expect = 6.9e-22
Identity = 45/76 (59.21%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 35  MMLPMSIRCNTCGNYIYKGTKFNSRKEDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQ 94
           + LPM ++CN C N + KGTKF SR EDVIGETYLGI+IFRF  +CT  S E+  +TDP+
Sbjct: 8   LSLPMRLQCNNCDNIMSKGTKFTSRVEDVIGETYLGIKIFRFQIQCTNGSHEMKFRTDPK 67

Query: 95  NSDYVVESGATRNFEP 111
           N+D+++ESGATR   P
Sbjct: 68  NADFIIESGATRLLLP 83

The following BLAST results are available for this feature:

BLAST of PI0023398 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54WR5	1.7e-57	40.48	Splicing factor YJU2 OS=Dictyostelium discoideum OX=44689 GN=yju2 PE=3 SV=1	[more]
A8WHR3	7.1e-56	50.23	Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV=1	[more]
Q9BW85	4.6e-55	54.69	Splicing factor YJU2 OS=Homo sapiens OX=9606 GN=YJU2 PE=1 SV=1	[more]
Q9D6J3	7.8e-55	50.23	Splicing factor YJU2 OS=Mus musculus OX=10090 GN=Yju2 PE=1 SV=1	[more]
Q9P7C5	3.0e-46	46.02	Splicing factor YJU2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2...	[more]

BLAST of PI0023398 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HNB0	5.3e-155	87.54	Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111465203 PE=3 SV=1	[more]
A0A6J1E6Q8	1.2e-154	87.23	Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111431206 PE=3 SV=1	[more]
A0A6J1EW00	7.2e-144	82.37	Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111438528 PE=3 SV=1	[more]
A0A6J1HYT1	1.2e-143	82.67	Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111469322 PE=3 SV=1	[more]
A0A6J1E3A4	1.2e-143	84.50	Splicing factor YJU2 OS=Momordica charantia OX=3673 GN=LOC111025649 PE=3 SV=1	[more]

BLAST of PI0023398 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149128.1	4.6e-169	95.43	splicing factor YJU2 [Cucumis sativus] >KGN50783.2 hypothetical protein Csa_0184...	[more]
XP_031745804.1	2.3e-168	95.12	LOW QUALITY PROTEIN: splicing factor YJU2-like [Cucumis sativus]	[more]
XP_038895471.1	2.1e-161	91.16	splicing factor YJU2 [Benincasa hispida] >XP_038895472.1 splicing factor YJU2 [B...	[more]
KAG6577830.1	2.9e-155	87.54	Splicing factor YJU2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023552633.1	4.9e-155	87.54	coiled-coil domain-containing protein 94 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0023398 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17130.1	9.7e-101	61.11	Family of unknown function (DUF572)	[more]
AT1G17130.2	1.2e-98	59.89	Family of unknown function (DUF572)	[more]
AT2G32050.1	8.6e-65	58.99	Family of unknown function (DUF572)	[more]
AT3G43250.1	5.4e-59	57.01	Family of unknown function (DUF572)	[more]
AT2G29430.1	6.9e-22	59.21	Family of unknown function (DUF572)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 173..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..320
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 297..328
None	No IPR available	PANTHER	PTHR12111:SF7	BNAA02G14200D PROTEIN	coord: 1..328
IPR007590	Saf4/Yju2 protein	PFAM	PF04502	DUF572	coord: 9..328 e-value: 5.0E-94 score: 315.6
IPR007590	Saf4/Yju2 protein	PANTHER	PTHR12111	SPLICING FACTOR YJU2	coord: 1..328
IPR043701	Splicing factor Yju2	HAMAP	MF_03226	YJU2	coord: 1..327 score: 24.366844

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0023398.1	PI0023398.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000349	generation of catalytic spliceosome for first transesterification step
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071006	U2-type catalytic step 1 spliceosome
molecular_function	GO:0046872	metal ion binding