PI0023169 (gene) Melon (PI 482460) v1

Overview
NamePI0023169
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionProtein no-on-transient A-like
Locationchr01: 24530172 .. 24530925 (-)
RNA-Seq ExpressionPI0023169
SyntenyPI0023169
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATATATTTAGAAACTAATGAAGAGATGAACTTTCAAATAAAAAATAAAAAGTGGTCCAATGAAATTATGAAACGTGATGGACGGCGAAAGATGGTAGCTGCCAACACGCAAGTTCTACTCAATTGAAAATGGAATAATAAGCTGAGATGGATATAATTGAAAACACGCACTGGAGAAATTCAAAGGTCGTCAATGGCGGCTGAAACTCAAACCCATCTTCCTAATTTCTCTAATTATATATAAATTTCAATCAATTATCTCCAATTCCTTCTATTTTCTTCTCTATCTAACAAAAACCCCTAAAAATGGCTGCCATAAAATCCCTAATTTTCATATCTCTTCTCGCCCTTCTCTTCTTCTCCGAATCCCTATCCACTTCTGCCGCCGATTGCCTCGGCGCTTCCAATTCTGCTACCGGAATGCTCCGCCGTAACATCCTTCAGACGGCGACTCATGAAATTGCAGATTCGGAACGGAAGATGAATGTTCATATCAAAAGAAGGGGAGGGGGGCGGATTCGACCTATAGCGACTGGCACTGGCACTCGCAACAGTAAATCAGCGGCGAATCGGAGCCGAGTCGCTTCTCTTGGCCTCGGATTTCTCCTCTTCTTCTTCGGATTGTTCTTGTAAAATCTGATTGATTTAATTCGTTTCTGTAAAAGATTGAGATTTATCTTGGATTTTATTAATTCATTTAGTTTCTTTTTTATTTGATGATAAAAATTTGATATGTGTCACTGTGTTATATAT

mRNA sequence

AAATATATTTAGAAACTAATGAAGAGATGAACTTTCAAATAAAAAATAAAAAGTGGTCCAATGAAATTATGAAACGTGATGGACGGCGAAAGATGGTAGCTGCCAACACGCAAGTTCTACTCAATTGAAAATGGAATAATAAGCTGAGATGGATATAATTGAAAACACGCACTGGAGAAATTCAAAGGTCGTCAATGGCGGCTGAAACTCAAACCCATCTTCCTAATTTCTCTAATTATATATAAATTTCAATCAATTATCTCCAATTCCTTCTATTTTCTTCTCTATCTAACAAAAACCCCTAAAAATGGCTGCCATAAAATCCCTAATTTTCATATCTCTTCTCGCCCTTCTCTTCTTCTCCGAATCCCTATCCACTTCTGCCGCCGATTGCCTCGGCGCTTCCAATTCTGCTACCGGAATGCTCCGCCGTAACATCCTTCAGACGGCGACTCATGAAATTGCAGATTCGGAACGGAAGATGAATGTTCATATCAAAAGAAGGGGAGGGGGGCGGATTCGACCTATAGCGACTGGCACTGGCACTCGCAACAGTAAATCAGCGGCGAATCGGAGCCGAGTCGCTTCTCTTGGCCTCGGATTTCTCCTCTTCTTCTTCGGATTGTTCTTGTAAAATCTGATTGATTTAATTCGTTTCTGTAAAAGATTGAGATTTATCTTGGATTTTATTAATTCATTTAGTTTCTTTTTTATTTGATGATAAAAATTTGATATGTGTCACTGTGTTATATAT

Coding sequence (CDS)

ATGGCTGCCATAAAATCCCTAATTTTCATATCTCTTCTCGCCCTTCTCTTCTTCTCCGAATCCCTATCCACTTCTGCCGCCGATTGCCTCGGCGCTTCCAATTCTGCTACCGGAATGCTCCGCCGTAACATCCTTCAGACGGCGACTCATGAAATTGCAGATTCGGAACGGAAGATGAATGTTCATATCAAAAGAAGGGGAGGGGGGCGGATTCGACCTATAGCGACTGGCACTGGCACTCGCAACAGTAAATCAGCGGCGAATCGGAGCCGAGTCGCTTCTCTTGGCCTCGGATTTCTCCTCTTCTTCTTCGGATTGTTCTTGTAA

Protein sequence

MAAIKSLIFISLLALLFFSESLSTSAADCLGASNSATGMLRRNILQTATHEIADSERKMNVHIKRRGGGRIRPIATGTGTRNSKSAANRSRVASLGLGFLLFFFGLFL
Homology
BLAST of PI0023169 vs. ExPASy TrEMBL
Match: A0A5A7VLE5 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00010 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 9.6e-37
Identity = 93/109 (85.32%), Postives = 98/109 (89.91%), Query Frame = 0

Query: 1   MAAIKSLIFISLLALLFFSESLSTSAADCLGASNSATGMLRRNILQTATHEIADSERKMN 60
           MAAIKSL+FISLLALLFFSESLSTSAADC GASNS TGMLRRN+LQTATHEIADSE KMN
Sbjct: 1   MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIADSEGKMN 60

Query: 61  VHIKRRGGGRIRPIATGTG-TRNSKSAANRSRVASLGLGFLLFFFGLFL 109
           VHIKR GGGRIRP+A GTG T N KSAA+RS+VAS GLGFLLFF  LFL
Sbjct: 61  VHIKRGGGGRIRPVAAGTGFTGNRKSAASRSQVASFGLGFLLFFSRLFL 109

BLAST of PI0023169 vs. ExPASy TrEMBL
Match: A0A0A0KAQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.8e-33
Identity = 88/108 (81.48%), Postives = 90/108 (83.33%), Query Frame = 0

Query: 1   MAAIKSLIFISLLALLFFSESLSTSAADCLGASNSATGMLRRNILQTATHEIADSERKMN 60
           MAAIKSLI ISLLALLFFSESLSTSAA+C GASNS T MLRRNILQTATHEIADSE KMN
Sbjct: 1   MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIADSEGKMN 60

Query: 61  VHIKRRGGGRIRPIATGTGTRNSKSAANRSRVASLGLGFLLFFFGLFL 109
           V IK+ G GR RPI  GTGT    SAANRSRV S GLGFLLFFFGL L
Sbjct: 61  VRIKKGGLGRFRPIGAGTGTGTRSSAANRSRVDSFGLGFLLFFFGLVL 108

BLAST of PI0023169 vs. ExPASy TrEMBL
Match: A0A1S3BRF6 (protein no-on-transient A-like OS=Cucumis melo OX=3656 GN=LOC103492900 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.7e-12
Identity = 70/142 (49.30%), Postives = 79/142 (55.63%), Query Frame = 0

Query: 1   MAAIKSLIFISLLALLFFSESLSTSAADCLGA-SNSATGMLRRNILQTATHEIA------ 60
           MAAIK+ IFISLLALLFF E L        GA SNS TG+L R ILQTA H+ A      
Sbjct: 1   MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60

Query: 61  DSERKM-NVHIK--------------------RRGGGRIRPIAT------GTGTRNSKSA 109
            SERKM NVH+K                     RGGG  R  ++      G GT + KSA
Sbjct: 61  SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSA 120

BLAST of PI0023169 vs. ExPASy TrEMBL
Match: A0A5D3D3Y6 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001920 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-07
Identity = 58/119 (48.74%), Postives = 71/119 (59.66%), Query Frame = 0

Query: 1   MAAIKSLIFISLLALLFFSESLSTSAADCLGASNSATGMLRRNILQTATHEIADS----- 60
           MAAI+ L+ I+LLALLFFSESL T        S+S TG+  RNIL T  H I +      
Sbjct: 1   MAAIRPLVSIALLALLFFSESLLT--------SHSLTGIPHRNILHTVAHRIVNGSVESS 60

Query: 61  -ERKMN-VHIKRRGGGRIRPI-ATGTGTRNSKSAANRSRVASLGLGFLL---FFFGLFL 109
            +RK N +H K R   RIRPI  +G+   + KSA NRSRVAS  +G +L    F GLFL
Sbjct: 61  YQRKSNKLHTKDR--RRIRPILISGSNGMHHKSAENRSRVASFEVGSMLCICIFLGLFL 109

BLAST of PI0023169 vs. ExPASy TrEMBL
Match: A0A1S3BT53 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo OX=3656 GN=LOC103492883 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.0e-06
Identity = 51/102 (50.00%), Postives = 62/102 (60.78%), Query Frame = 0

Query: 1  MAAIKSLIFISLLALLFFSESLSTSAADCLGASNSATGMLRRNILQTATHEIADS----- 60
          MAAI+ L+ I+LLALLFFSESL T        S+S TG+  RNIL T  H I +      
Sbjct: 1  MAAIRPLVSIALLALLFFSESLLT--------SHSLTGIPHRNILHTVAHRIVNGSVESS 60

Query: 61 -ERKMN-VHIKRRGGGRIRPI-ATGTGTRNSKSAANRSRVAS 95
           +RK N +H K R   RIRPI  +G+   + KSA NRSRVAS
Sbjct: 61 YQRKSNKLHTKDR--RRIRPILISGSNGMHHKSAENRSRVAS 92

BLAST of PI0023169 vs. NCBI nr
Match: KAA0068047.1 (protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no-on-transient A-like [Cucumis melo var. makuwa])

HSP 1 Score: 162.5 bits (410), Expect = 2.0e-36
Identity = 93/109 (85.32%), Postives = 98/109 (89.91%), Query Frame = 0

Query: 1   MAAIKSLIFISLLALLFFSESLSTSAADCLGASNSATGMLRRNILQTATHEIADSERKMN 60
           MAAIKSL+FISLLALLFFSESLSTSAADC GASNS TGMLRRN+LQTATHEIADSE KMN
Sbjct: 1   MAAIKSLLFISLLALLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIADSEGKMN 60

Query: 61  VHIKRRGGGRIRPIATGTG-TRNSKSAANRSRVASLGLGFLLFFFGLFL 109
           VHIKR GGGRIRP+A GTG T N KSAA+RS+VAS GLGFLLFF  LFL
Sbjct: 61  VHIKRGGGGRIRPVAAGTGFTGNRKSAASRSQVASFGLGFLLFFSRLFL 109

BLAST of PI0023169 vs. NCBI nr
Match: KGN44886.1 (hypothetical protein Csa_015765 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 7.8e-33
Identity = 88/108 (81.48%), Postives = 90/108 (83.33%), Query Frame = 0

Query: 1   MAAIKSLIFISLLALLFFSESLSTSAADCLGASNSATGMLRRNILQTATHEIADSERKMN 60
           MAAIKSLI ISLLALLFFSESLSTSAA+C GASNS T MLRRNILQTATHEIADSE KMN
Sbjct: 1   MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIADSEGKMN 60

Query: 61  VHIKRRGGGRIRPIATGTGTRNSKSAANRSRVASLGLGFLLFFFGLFL 109
           V IK+ G GR RPI  GTGT    SAANRSRV S GLGFLLFFFGL L
Sbjct: 61  VRIKKGGLGRFRPIGAGTGTGTRSSAANRSRVDSFGLGFLLFFFGLVL 108

BLAST of PI0023169 vs. NCBI nr
Match: KAG6575859.1 (hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014393.1 hypothetical protein SDJN02_24570, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-21
Identity = 71/114 (62.28%), Postives = 85/114 (74.56%), Query Frame = 0

Query: 1   MAAIKSLIFISLLALLFFSESLSTSAADCLGASNSATGMLRRNILQTATHEIADS----- 60
           MAA+KSL+ ++LLALL FSESL+ SA D  G SNS TGMLRRN+LQTA H+IAD+     
Sbjct: 1   MAALKSLVSVALLALLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESS 60

Query: 61  -ERKMNVHIKRRGGGRIRPIATGTGTRNSKSAANRSRVASLGLGFLLFFFGLFL 109
            ERKMNVHIKR    R+RP+ATGT      SAANRSR+AS+G+G +L   GLFL
Sbjct: 61  PERKMNVHIKR----RMRPVATGT----RSSAANRSRIASIGVGSVLVVLGLFL 106

BLAST of PI0023169 vs. NCBI nr
Match: KAG6593163.1 (hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 82.8 bits (203), Expect = 2.0e-12
Identity = 61/111 (54.95%), Postives = 73/111 (65.77%), Query Frame = 0

Query: 1   MAAIKSLIFISLLALLFFSESLSTSAADCLGASNSATGMLRRNILQTATHEIADSERKMN 60
           MAAIK+L+ I+L+ALL F ESL TSAA   GAS S  G+LRRNI+QT       +E+K N
Sbjct: 1   MAAIKALLSIALIALLLFFESLPTSAAVHRGASTSLAGILRRNIVQTTADHHQVAEKKFN 60

Query: 61  VHIKRRGGGRIRPIATGTGTRNSKSAANRSRVASLGLGFLLFFF---GLFL 109
           VHIKRR   R+RP+  G   R   SAANRSR A  G+G +L  F   GLFL
Sbjct: 61  VHIKRR--MRMRPVLIG---RPKTSAANRSREAFCGVGSMLCIFVLLGLFL 106

BLAST of PI0023169 vs. NCBI nr
Match: XP_008451666.1 (PREDICTED: protein no-on-transient A-like [Cucumis melo])

HSP 1 Score: 80.9 bits (198), Expect = 7.6e-12
Identity = 70/142 (49.30%), Postives = 79/142 (55.63%), Query Frame = 0

Query: 1   MAAIKSLIFISLLALLFFSESLSTSAADCLGA-SNSATGMLRRNILQTATHEIA------ 60
           MAAIK+ IFISLLALLFF E L        GA SNS TG+L R ILQTA H+ A      
Sbjct: 1   MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60

Query: 61  DSERKM-NVHIK--------------------RRGGGRIRPIAT------GTGTRNSKSA 109
            SERKM NVH+K                     RGGG  R  ++      G GT + KSA
Sbjct: 61  SSERKMNNVHMKIGTSGGGGGGRGGGGGGGRGGRGGGGGRDRSSKRTNLGGGGTGHHKSA 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VLE59.6e-3785.32Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A0A0KAQ73.8e-3381.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1[more]
A0A1S3BRF63.7e-1249.30protein no-on-transient A-like OS=Cucumis melo OX=3656 GN=LOC103492900 PE=4 SV=1[more]
A0A5D3D3Y61.2e-0748.74E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3BT533.0e-0650.00E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo OX=3656 GN=LOC103492883 P... [more]
Match NameE-valueIdentityDescription
KAA0068047.12.0e-3685.32protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no... [more]
KGN44886.17.8e-3381.48hypothetical protein Csa_015765 [Cucumis sativus][more]
KAG6575859.11.1e-2162.28hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6593163.12.0e-1254.95hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_008451666.17.6e-1249.30PREDICTED: protein no-on-transient A-like [Cucumis melo][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0023169.1PI0023169.1mRNA