PI0023060 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTACATCCTCATCTTCCTTTCCCACTCCGACTAATGTCTCTCTTCCACCTATTTCTTCTATCATTGCACCCACCCCCAAGGACCATAATGAAGTTTTGCACAACTCTATTCCAGTTACTACTAATTCTAAGAATCCAAATTCTACTAATGTGTATCCTTTAGATACAGGTTCTCATGTAGTTTTGCAGGACCAAGACTATCCTTCTTCCCCTATGCCAACTATCTCATTGATGGGGAATTATGAATCTTCATCCTCTATGGTTCATTCCCCTATTGATGCTCTTCATGCTATCAATGCTCATCCTATGATGACTCGTGGTAAGTGTGACATTTTTAAATCTAAGGCATACTTAGTTGATTATACCTAA ATGTCTACATCCTCATCTTCCTTTCCCACTCCGACTAATGTCTCTCTTCCACCTATTTCTTCTATCATTGCACCCACCCCCAAGGACCATAATGAAGTTTTGCACAACTCTATTCCAGTTACTACTAATTCTAAGAATCCAAATTCTACTAATGTGTATCCTTTAGATACAGGTTCTCATGTAGTTTTGCAGGACCAAGACTATCCTTCTTCCCCTATGCCAACTATCTCATTGATGGGGAATTATGAATCTTCATCCTCTATGGTTCATTCCCCTATTGATGCTCTTCATGCTATCAATGCTCATCCTATGATGACTCGTGGTAAGTGTGACATTTTTAAATCTAAGGCATACTTAGTTGATTATACCTAA ATGTCTACATCCTCATCTTCCTTTCCCACTCCGACTAATGTCTCTCTTCCACCTATTTCTTCTATCATTGCACCCACCCCCAAGGACCATAATGAAGTTTTGCACAACTCTATTCCAGTTACTACTAATTCTAAGAATCCAAATTCTACTAATGTGTATCCTTTAGATACAGGTTCTCATGTAGTTTTGCAGGACCAAGACTATCCTTCTTCCCCTATGCCAACTATCTCATTGATGGGGAATTATGAATCTTCATCCTCTATGGTTCATTCCCCTATTGATGCTCTTCATGCTATCAATGCTCATCCTATGATGACTCGTGGTAAGTGTGACATTTTTAAATCTAAGGCATACTTAGTTGATTATACCTAA MSTSSSSFPTPTNVSLPPISSIIAPTPKDHNEVLHNSIPVTTNSKNPNSTNVYPLDTGSHVVLQDQDYPSSPMPTISLMGNYESSSSMVHSPIDALHAINAHPMMTRGKCDIFKSKAYLVDYT Homology
BLAST of PI0023060 vs. ExPASy TrEMBL
Match: A0A5D3CTU1 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00670 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 4.4e-22 Identity = 67/95 (70.53%), Postives = 73/95 (76.84%), Query Frame = 0
BLAST of PI0023060 vs. ExPASy TrEMBL
Match: A0A0A0KYW3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G432470 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 5.4e-20 Identity = 63/95 (66.32%), Postives = 70/95 (73.68%), Query Frame = 0
BLAST of PI0023060 vs. ExPASy TrEMBL
Match: A0A5A7VFQ6 (Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00150 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.8e-07 Identity = 45/120 (37.50%), Postives = 66/120 (55.00%), Query Frame = 0
BLAST of PI0023060 vs. ExPASy TrEMBL
Match: A0A5D3D5W0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G001310 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 6.9e-07 Identity = 44/120 (36.67%), Postives = 65/120 (54.17%), Query Frame = 0
BLAST of PI0023060 vs. ExPASy TrEMBL
Match: A0A5D3DJG8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001450 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 3.8e-05 Identity = 45/120 (37.50%), Postives = 61/120 (50.83%), Query Frame = 0
BLAST of PI0023060 vs. NCBI nr
Match: KAA0032169.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK14414.1 putative mitochondrial protein [Cucumis melo var. makuwa]) HSP 1 Score: 114.0 bits (284), Expect = 9.2e-22 Identity = 67/95 (70.53%), Postives = 73/95 (76.84%), Query Frame = 0
BLAST of PI0023060 vs. NCBI nr
Match: KGN54718.1 (hypothetical protein Csa_012961 [Cucumis sativus]) HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19 Identity = 63/95 (66.32%), Postives = 70/95 (73.68%), Query Frame = 0
BLAST of PI0023060 vs. NCBI nr
Match: KAA0067212.1 (retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]) HSP 1 Score: 65.5 bits (158), Expect = 3.7e-07 Identity = 45/120 (37.50%), Postives = 66/120 (55.00%), Query Frame = 0
BLAST of PI0023060 vs. NCBI nr
Match: TYK18915.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 63.5 bits (153), Expect = 1.4e-06 Identity = 44/120 (36.67%), Postives = 65/120 (54.17%), Query Frame = 0
BLAST of PI0023060 vs. NCBI nr
Match: KAA0045110.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK23628.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 57.8 bits (138), Expect = 7.8e-05 Identity = 45/120 (37.50%), Postives = 61/120 (50.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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