PI0022959 (gene) Melon (PI 482460) v1

Overview


Name	PI0022959
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr01: 6310009 .. 6310797 (+)
RNA-Seq Expression	PI0022959
Synteny	PI0022959

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACCCAAAAAAAGGTTGTGAGAAGGATCTTACTCCCAATATAAATATTGGCATTTCAAAACTTTTGTCTCAACAAGCAATCGTACTTGATTGAACTCGTAAAACAGAAACGAGCAATTGTAGTACGAAGAAATTTATCGTATCTACATATTTTTTTTTCTTTCATTTGTTATGGGTATCTCCAAGAAAAACATGTTTGTTTTTGTTGGGTTTCTTCTTATTAGCACAACCCTAATTGACATTACAAAAGCAACGACAAGAGCCATAAATTATGGTGCTCCTCAAGGTGTGGAGATTGTATGTAGCCCAGAAGATCCAAGAGTTTTCAAACTACATTATGCAAATGATGAATCAAGTGAATATAATTCAGTTGATGATTGCAAAACTCTAAAACGTAGCATCACTGTTGATCGATTGCGAAATGTGGCTCCTCAAAACTCACAAGAAACCAAAGGAGTTGCTCCTTCACCAAATATGAATTAAATTCATGTGGCAAGTTCATGCTTTTGTTTTTTTAATTAAATGATTGTTTGTTTGTTGTGTTATCCATATAAATTGCAATGAAAAAAAACCAGAATTTTTTATTTTTATGTGAAATTGTGGAATTGTGAAATACTTTTTAATTGTAAAAGAAAAGGTGAAGAAACAGAAAAGGAAAAAAATAGTTGAATTAAAGTTGAAAAGAAAAACAAATTGAAAGTAGAGACTGGAGGATGGACAAATTAATTTTCTGGTATTGGATGCTTTTGTAATTGAAAGGTCAAATGAATAGTGTTCTCTGCTCCTAAA

mRNA sequence

CAACCCAAAAAAAGGTTGTGAGAAGGATCTTACTCCCAATATAAATATTGGCATTTCAAAACTTTTGTCTCAACAAGCAATCGTACTTGATTGAACTCGTAAAACAGAAACGAGCAATTGTAGTACGAAGAAATTTATCGTATCTACATATTTTTTTTTCTTTCATTTGTTATGGGTATCTCCAAGAAAAACATGTTTGTTTTTGTTGGGTTTCTTCTTATTAGCACAACCCTAATTGACATTACAAAAGCAACGACAAGAGCCATAAATTATGGTGCTCCTCAAGGTGTGGAGATTGTATGTAGCCCAGAAGATCCAAGAGTTTTCAAACTACATTATGCAAATGATGAATCAAGTGAATATAATTCAGTTGATGATTGCAAAACTCTAAAACGTAGCATCACTGTTGATCGATTGCGAAATGTGGCTCCTCAAAACTCACAAGAAACCAAAGGAGTTGCTCCTTCACCAAATATGAATTAAATTCATGTGGCAAGTTCATGCTTTTGTTTTTTTAATTAAATGATTGTTTGTTTGTTGTGTTATCCATATAAATTGCAATGAAAAAAAACCAGAATTTTTTATTTTTATGTGAAATTGTGGAATTGTGAAATACTTTTTAATTGTAAAAGAAAAGGTGAAGAAACAGAAAAGGAAAAAAATAGTTGAATTAAAGTTGAAAAGAAAAACAAATTGAAAGTAGAGACTGGAGGATGGACAAATTAATTTTCTGGTATTGGATGCTTTTGTAATTGAAAGGTCAAATGAATAGTGTTCTCTGCTCCTAAA

Coding sequence (CDS)

ATGGGTATCTCCAAGAAAAACATGTTTGTTTTTGTTGGGTTTCTTCTTATTAGCACAACCCTAATTGACATTACAAAAGCAACGACAAGAGCCATAAATTATGGTGCTCCTCAAGGTGTGGAGATTGTATGTAGCCCAGAAGATCCAAGAGTTTTCAAACTACATTATGCAAATGATGAATCAAGTGAATATAATTCAGTTGATGATTGCAAAACTCTAAAACGTAGCATCACTGTTGATCGATTGCGAAATGTGGCTCCTCAAAACTCACAAGAAACCAAAGGAGTTGCTCCTTCACCAAATATGAATTAA

Protein sequence

MGISKKNMFVFVGFLLISTTLIDITKATTRAINYGAPQGVEIVCSPEDPRVFKLHYANDESSEYNSVDDCKTLKRSITVDRLRNVAPQNSQETKGVAPSPNMN

Homology

[Close]

BLAST of PI0022959 vs. ExPASy TrEMBL
Match: A0A0A0K4C8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269040 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.7e-31
Identity = 73/101 (72.28%), Postives = 82/101 (81.19%), Query Frame = 0


Query: 1   MGISKKNMFVFVGFLLISTTLIDITKATTRAINYGAPQGVEIVCSPEDPRVFKLHYANDE 60
           M I+KKNMFVFVG LLISTTLI+ITKATTR++NYGAPQGVEIVCSPEDPRVF+LHYANDE
Sbjct: 1   MDITKKNMFVFVGLLLISTTLIEITKATTRSMNYGAPQGVEIVCSPEDPRVFRLHYANDE 60

Query: 61  SSEYNSVDDCKTLKRSITVD----------RLRNVAPQNSQ 92
           SSEYN+VDDC TLK ++  D            +NVAPQ SQ
Sbjct: 61  SSEYNAVDDCATLKSNLNFDGRSQNVPAQSPSQNVAPQTSQ 101

[Close]

BLAST of PI0022959 vs. ExPASy TrEMBL
Match: A0A5D3BWB1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2392G00270 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.7e-28
Identity = 70/104 (67.31%), Postives = 79/104 (75.96%), Query Frame = 0


Query: 8   MFVFVGFLLISTTLIDITKATTRAINYGAPQGVEIVCSPEDPRVFKLHYANDESSEYNSV 67
           M V VG LLISTTLI+ITKAT+R +NYGAPQGVEIVCSPEDPRVFKLHYANDESSE+N+V
Sbjct: 1   MVVLVGVLLISTTLIEITKATSRIVNYGAPQGVEIVCSPEDPRVFKLHYANDESSEFNAV 60

Query: 68  DDCKTLKRSI---------------TVDRLRNVAPQNSQETKGV 97
           DDCKTL R++                  +  NVAPQ+SQETKGV
Sbjct: 61  DDCKTLNRNLNFGGRSQDVTPQSPNVAPQSPNVAPQSSQETKGV 104

[Close]

BLAST of PI0022959 vs. ExPASy TrEMBL
Match: A0A0A0K7P8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269030 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.3e-27
Identity = 76/105 (72.38%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 1   MGISKKNMFVFVGFLLISTTLIDITKA-TTRAINYG-APQGVEIVCSPEDPRVFKLHYAN 60
           MGISKKNM VFVG LLISTTLI+ITKA TTR  +YG   QGVEIVCSPEDPRVFKLHYAN
Sbjct: 1   MGISKKNMLVFVGVLLISTTLIEITKATTTRTRDYGPLDQGVEIVCSPEDPRVFKLHYAN 60

Query: 61  DESSEYNSVDDCKTLKRSITVD-RLRNVAPQNSQETKGVAPSPNM 103
           DESSEYNSVDDCKTLK     + +  N+APQ+SQ       SPNM
Sbjct: 61  DESSEYNSVDDCKTLKSKTNFNGQSPNMAPQSSQ-------SPNM 98

[Close]

BLAST of PI0022959 vs. ExPASy TrEMBL
Match: A0A6J1DYH7 (uncharacterized protein LOC111025777 OS=Momordica charantia OX=3673 GN=LOC111025777 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.2e-04
Identity = 34/72 (47.22%), Postives = 42/72 (58.33%), Query Frame = 0


Query: 1  MGISKKNMFVFVGFLLISTTLIDITKATTRAINYGAPQG-VEIVCSPEDPRVFKLHYAND 60
          M ISK +MF+FVG LL    +IDIT A TR I+Y   +G V   CSP  P + KLH AN 
Sbjct: 1  MAISKGSMFIFVGILLYCMGMIDITNA-TRFIHYDPLRGDVSPGCSPTHPELCKLHSANP 60

Query: 61 ESSEYNSVDDCK 72
                S+D C+
Sbjct: 61 YKRGCTSIDRCR 71

[Close]

BLAST of PI0022959 vs. NCBI nr
Match: KAA0036627.1 (hypothetical protein E6C27_scaffold191G001550 [Cucumis melo var. makuwa] >TYK03365.1 hypothetical protein E5676_scaffold2392G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 134.4 bits (337), Expect = 5.5e-28
Identity = 70/104 (67.31%), Postives = 79/104 (75.96%), Query Frame = 0


Query: 8   MFVFVGFLLISTTLIDITKATTRAINYGAPQGVEIVCSPEDPRVFKLHYANDESSEYNSV 67
           M V VG LLISTTLI+ITKAT+R +NYGAPQGVEIVCSPEDPRVFKLHYANDESSE+N+V
Sbjct: 1   MVVLVGVLLISTTLIEITKATSRIVNYGAPQGVEIVCSPEDPRVFKLHYANDESSEFNAV 60

Query: 68  DDCKTLKRSI---------------TVDRLRNVAPQNSQETKGV 97
           DDCKTL R++                  +  NVAPQ+SQETKGV
Sbjct: 61  DDCKTLNRNLNFGGRSQDVTPQSPNVAPQSPNVAPQSSQETKGV 104

[Close]

BLAST of PI0022959 vs. NCBI nr
Match: KAE8646139.1 (hypothetical protein Csa_016560, partial [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 4.7e-27
Identity = 76/105 (72.38%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 1   MGISKKNMFVFVGFLLISTTLIDITKA-TTRAINYG-APQGVEIVCSPEDPRVFKLHYAN 60
           MGISKKNM VFVG LLISTTLI+ITKA TTR  +YG   QGVEIVCSPEDPRVFKLHYAN
Sbjct: 25  MGISKKNMLVFVGVLLISTTLIEITKATTTRTRDYGPLDQGVEIVCSPEDPRVFKLHYAN 84

Query: 61  DESSEYNSVDDCKTLKRSITVD-RLRNVAPQNSQETKGVAPSPNM 103
           DESSEYNSVDDCKTLK     + +  N+APQ+SQ       SPNM
Sbjct: 85  DESSEYNSVDDCKTLKSKTNFNGQSPNMAPQSSQ-------SPNM 122

[Close]

BLAST of PI0022959 vs. NCBI nr
Match: XP_022159360.1 (uncharacterized protein LOC111025777 [Momordica charantia])

HSP 1 Score: 55.8 bits (133), Expect = 2.5e-04
Identity = 34/72 (47.22%), Postives = 42/72 (58.33%), Query Frame = 0


Query: 1  MGISKKNMFVFVGFLLISTTLIDITKATTRAINYGAPQG-VEIVCSPEDPRVFKLHYAND 60
          M ISK +MF+FVG LL    +IDIT A TR I+Y   +G V   CSP  P + KLH AN 
Sbjct: 1  MAISKGSMFIFVGILLYCMGMIDITNA-TRFIHYDPLRGDVSPGCSPTHPELCKLHSANP 60

Query: 61 ESSEYNSVDDCK 72
                S+D C+
Sbjct: 61 YKRGCTSIDRCR 71

The following BLAST results are available for this feature:

BLAST of PI0022959 vs.


Match Name	E-value	Identity	Description

BLAST of PI0022959 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4C8	5.7e-31	72.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269040 PE=4 SV=1	[more]
A0A5D3BWB1	2.7e-28	67.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K7P8	2.3e-27	72.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G269030 PE=4 SV=1	[more]
A0A6J1DYH7	1.2e-04	47.22	uncharacterized protein LOC111025777 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of PI0022959 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036627.1	5.5e-28	67.31	hypothetical protein E6C27_scaffold191G001550 [Cucumis melo var. makuwa] >TYK033...	[more]
KAE8646139.1	4.7e-27	72.38	hypothetical protein Csa_016560, partial [Cucumis sativus]	[more]
XP_022159360.1	2.5e-04	47.22	uncharacterized protein LOC111025777 [Momordica charantia]	[more]

BLAST of PI0022959 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0022959.1	PI0022959.1	mRNA