PI0022697 (gene) Melon (PI 482460) v1

Overview


Name	PI0022697
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Gag-pol
Location	chr07: 15312642 .. 15313443 (-)
RNA-Seq Expression	PI0022697
Synteny	PI0022697

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGACCTCTGCGATACGGACTTTGATGCTGAAGATTTAAGAGAGGCAGAGGACTCGACTCTAGTTCCTGATGAGTCGCGGCATGAAGAGGTTCTTGAAGAGCCAATTGATGACCCACTCCCCAAAGGTAAAGAAATAGCCTTTGAGGAAGCTAGTGAAACGCGAGCTCCTCCATCGCCGAAGCAAATAGTTGACCAGCAAGAAGTCGCGGCGGAAGAGAATGAAGATGAAGATTTTTACAAGTTCATCAATGAGGCAATTGGAAAGCCAATGATGGATGGACTTGAAGACATCTTCCAAAACAAAGCAGATCTGCATGAACGCGCGATGAGACATGAGAAGCAGATTTCAGACTTGGAGTTGAAAATTGACAATCATCATCAATCCCAACATGATCAACTCACCTCTAAGGTTGCGAGCTTGAAGGAGCAAAGCAAGGTAATGGTGGCGTTGATCAAGAAAGCTTCTTTGCGATCTGACAGGCAGTACAAATCCATGATGAACTACATCCACGCGGCCATCACAAGTCTCATGCCAAAGCATGTCATACCGCCTGAGTTCGAAGAACCCCTTTCAGACGTTGAATTGGACACGCACCAGGACCTTCCGAAACGCAGCTATAATCTAAATTTGGGGGTGTTCTTTGTATTTTTCCTACTTTGTGATTTCAATTTTGTACTTATGTAAATTTTATTCTTTTGTAATTACTTATTTCGCAATACAAGTACATATTTCAAATCTTCATTTTGCGTTTCACTTTTCTTGTTTCAAGTAATAGTTTTAGCGTCTAAGTGTTTAA

mRNA sequence

ATGCAAGACCTCTGCGATACGGACTTTGATGCTGAAGATTTAAGAGAGGCAGAGGACTCGACTCTAGTTCCTGATGAGTCGCGGCATGAAGAGGTTCTTGAAGAGCCAATTGATGACCCACTCCCCAAAGGTAAAGAAATAGCCTTTGAGGAAGCTAGTGAAACGCGAGCTCCTCCATCGCCGAAGCAAATAGTTGACCAGCAAGAAGTCGCGGCGGAAGAGAATGAAGATGAAGATTTTTACAAGTTCATCAATGAGGCAATTGGAAAGCCAATGATGGATGGACTTGAAGACATCTTCCAAAACAAAGCAGATCTGCATGAACGCGCGATGAGACATGAGAAGCAGATTTCAGACTTGGAGTTGAAAATTGACAATCATCATCAATCCCAACATGATCAACTCACCTCTAAGGTTGCGAGCTTGAAGGAGCAAAGCAAGGTAATGGTGGCGTTGATCAAGAAAGCTTCTTTGCGATCTGACAGGCAGTACAAATCCATGATGAACTACATCCACGCGGCCATCACAAGTCTCATGCCAAAGCATGTCATACCGCCTGAGTTCGAAGAACCCCTTTCAGACGTTGAATTGGACACGCACCAGGACCTTCCGAAACGCAGCTATAATCTAAATTTGGGGCGTCTAAGTGTTTAA

Coding sequence (CDS)

ATGCAAGACCTCTGCGATACGGACTTTGATGCTGAAGATTTAAGAGAGGCAGAGGACTCGACTCTAGTTCCTGATGAGTCGCGGCATGAAGAGGTTCTTGAAGAGCCAATTGATGACCCACTCCCCAAAGGTAAAGAAATAGCCTTTGAGGAAGCTAGTGAAACGCGAGCTCCTCCATCGCCGAAGCAAATAGTTGACCAGCAAGAAGTCGCGGCGGAAGAGAATGAAGATGAAGATTTTTACAAGTTCATCAATGAGGCAATTGGAAAGCCAATGATGGATGGACTTGAAGACATCTTCCAAAACAAAGCAGATCTGCATGAACGCGCGATGAGACATGAGAAGCAGATTTCAGACTTGGAGTTGAAAATTGACAATCATCATCAATCCCAACATGATCAACTCACCTCTAAGGTTGCGAGCTTGAAGGAGCAAAGCAAGGTAATGGTGGCGTTGATCAAGAAAGCTTCTTTGCGATCTGACAGGCAGTACAAATCCATGATGAACTACATCCACGCGGCCATCACAAGTCTCATGCCAAAGCATGTCATACCGCCTGAGTTCGAAGAACCCCTTTCAGACGTTGAATTGGACACGCACCAGGACCTTCCGAAACGCAGCTATAATCTAAATTTGGGGCGTCTAAGTGTTTAA

Protein sequence

MQDLCDTDFDAEDLREAEDSTLVPDESRHEEVLEEPIDDPLPKGKEIAFEEASETRAPPSPKQIVDQQEVAAEENEDEDFYKFINEAIGKPMMDGLEDIFQNKADLHERAMRHEKQISDLELKIDNHHQSQHDQLTSKVASLKEQSKVMVALIKKASLRSDRQYKSMMNYIHAAITSLMPKHVIPPEFEEPLSDVELDTHQDLPKRSYNLNLGRLSV

Homology

[Close]

BLAST of PI0022697 vs. ExPASy TrEMBL
Match: A0A5D3D8Q5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold811G00610 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.0e-13
Identity = 51/113 (45.13%), Postives = 70/113 (61.95%), Query Frame = 0


Query: 4   LCDTDFDAED-LREAEDSTLVPDESRHEEVLEEPIDDPLPKGKEIAFEEASETRAPPSPK 63
           +CD     ED ++  ED +LVP  S  +EVLE+ +DDPL KGK I  + ASET  P  PK
Sbjct: 11  VCDPFTPIEDEIKNLEDVSLVPVGSPRKEVLEKVVDDPLLKGKGITSKIASETHPPSPPK 70

Query: 64  QIVDQQEVAAEENEDEDFYKFINEAIGKPMMDGLEDIFQNKADLHERAMRHEK 116
           +   Q + A E +E ++++KFI    GKPM DG ED+FQ +A+  E  +R EK
Sbjct: 71  ETSKQHDTAKESDEKDEYFKFIENNFGKPMRDGFEDMFQCQANFQESQLRSEK 123

[Close]

BLAST of PI0022697 vs. ExPASy TrEMBL
Match: A0A5A7VKU1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00210 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 5.1e-13
Identity = 60/185 (32.43%), Postives = 96/185 (51.89%), Query Frame = 0


Query: 12  EDLREAEDSTLVPDESRHEEVLEEPIDDPLPKGKEIAFEEASETRAPPSPKQIVDQQEVA 71
           +++++ +D+ LVP  S  +EVLE+ IDD L KGK+I FE   +T  P  PKQ   QQ+  
Sbjct: 58  DEIKDPKDAPLVPVGSPRKEVLEKNIDDSLLKGKQIVFEVVGQTYPPSPPKQRSKQQDTT 117

Query: 72  AEENEDEDFYKFINEAIGKPMMDGLEDIFQNKADLHERAMRHEKQISDLELKIDNHHQSQ 131
            E ++++++ KF                              EK  SD+ +         
Sbjct: 118 KESDDEDEYVKF------------------------------EKIESDIAM--------- 177

Query: 132 HDQLTSKVASLKEQSKVMVALIKKASLRSDRQYKSMMNYIHAAITSLMPKHVIPPEFEEP 191
              L ++  +++ Q + M   IK+ASL ++ Q +++MNYIH  I SL+P  + PPE EEP
Sbjct: 178 ---LKTQNEAMQTQIQTMKTFIKQASLWTEMQCRTLMNYIHVTIVSLVPTPIFPPELEEP 200

Query: 192 LSDVE 197
           L++VE
Sbjct: 238 LTEVE 200

[Close]

BLAST of PI0022697 vs. ExPASy TrEMBL
Match: A0A5A7U0L9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00960 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 6.7e-13
Identity = 47/80 (58.75%), Postives = 59/80 (73.75%), Query Frame = 0


Query: 54  ETRAPPSPKQIVDQQEVAAEENEDED-FYKFINEAIGKPMMDGLEDIFQNKADLHERAMR 113
           ET AP   KQI +QQ+ AA E+++ED ++KFI +  GKP+MDG +D+FQN+ DL E   R
Sbjct: 13  ETHAPLPLKQINNQQKNAAGESDNEDHYFKFIGDTFGKPVMDGFKDVFQNQVDLQECTWR 72

Query: 114 HEKQISDLELKIDN---HHQ 130
           HEKQI DLELKIDN   HHQ
Sbjct: 73  HEKQIQDLELKIDNCNQHHQ 92

[Close]

BLAST of PI0022697 vs. ExPASy TrEMBL
Match: A0A5A7T7V1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001610 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.5e-12
Identity = 49/113 (43.36%), Postives = 70/113 (61.95%), Query Frame = 0


Query: 4   LCDTDFDAED-LREAEDSTLVPDESRHEEVLEEPIDDPLPKGKEIAFEEASETRAPPSPK 63
           +CD     ED ++  ED +LVP  S  +EVLE+ +DDPL KGK I  + ASET  P  PK
Sbjct: 11  VCDPFTPIEDEIKNLEDVSLVPVGSPRKEVLEKVVDDPLLKGKGITSKIASETHPPSPPK 70

Query: 64  QIVDQQEVAAEENEDEDFYKFINEAIGKPMMDGLEDIFQNKADLHERAMRHEK 116
           +   Q + A E ++ ++++KFI    GKPM DG ED+FQ +A+  E  +R +K
Sbjct: 71  ETSKQHDTAKESDDKDEYFKFIENNFGKPMRDGFEDMFQCQANFQESQLRSQK 123

[Close]

BLAST of PI0022697 vs. ExPASy TrEMBL
Match: A0A5D3E1H0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2208G00350 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 4.3e-12
Identity = 53/136 (38.97%), Postives = 87/136 (63.97%), Query Frame = 0


Query: 1   MQD-LCD-TDFDAEDLREAEDSTLVPDESRHEEVLEEPIDDPLPKGKEIAFEEASETRAP 60
           +QD LCD   F  +  +E+E++TL      ++ +LE+ IDDPL K K++  E+AS+TR P
Sbjct: 55  LQDSLCDLLAFIGDTCKESENTTLTLVVLSNKNILEKAIDDPLQKRKQVDSEDASKTRQP 114

Query: 61  PSPKQI-------VDQQEVAAEENEDEDFY-KFINEAIGKPMMDGLEDIFQNKADLHERA 120
             PKQ          Q+E   ++++D+++Y KFINE + +P+  G ED+FQ +A+L E  
Sbjct: 115 SPPKQSPKPTMQDTKQKEAIRDDDDDDEYYFKFINENVSQPLRYGFEDVFQCQANLQETQ 174

Query: 121 MRHEKQISDLELKIDN 127
           ++++K + DLELK D+
Sbjct: 175 LQNQKPLQDLELKPDS 190

[Close]

BLAST of PI0022697 vs. NCBI nr
Match: TYK19850.1 (hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 6.2e-13
Identity = 51/113 (45.13%), Postives = 70/113 (61.95%), Query Frame = 0


Query: 4   LCDTDFDAED-LREAEDSTLVPDESRHEEVLEEPIDDPLPKGKEIAFEEASETRAPPSPK 63
           +CD     ED ++  ED +LVP  S  +EVLE+ +DDPL KGK I  + ASET  P  PK
Sbjct: 11  VCDPFTPIEDEIKNLEDVSLVPVGSPRKEVLEKVVDDPLLKGKGITSKIASETHPPSPPK 70

Query: 64  QIVDQQEVAAEENEDEDFYKFINEAIGKPMMDGLEDIFQNKADLHERAMRHEK 116
           +   Q + A E +E ++++KFI    GKPM DG ED+FQ +A+  E  +R EK
Sbjct: 71  ETSKQHDTAKESDEKDEYFKFIENNFGKPMRDGFEDMFQCQANFQESQLRSEK 123

[Close]

BLAST of PI0022697 vs. NCBI nr
Match: KAA0067817.1 (hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-12
Identity = 60/185 (32.43%), Postives = 96/185 (51.89%), Query Frame = 0


Query: 12  EDLREAEDSTLVPDESRHEEVLEEPIDDPLPKGKEIAFEEASETRAPPSPKQIVDQQEVA 71
           +++++ +D+ LVP  S  +EVLE+ IDD L KGK+I FE   +T  P  PKQ   QQ+  
Sbjct: 58  DEIKDPKDAPLVPVGSPRKEVLEKNIDDSLLKGKQIVFEVVGQTYPPSPPKQRSKQQDTT 117

Query: 72  AEENEDEDFYKFINEAIGKPMMDGLEDIFQNKADLHERAMRHEKQISDLELKIDNHHQSQ 131
            E ++++++ KF                              EK  SD+ +         
Sbjct: 118 KESDDEDEYVKF------------------------------EKIESDIAM--------- 177

Query: 132 HDQLTSKVASLKEQSKVMVALIKKASLRSDRQYKSMMNYIHAAITSLMPKHVIPPEFEEP 191
              L ++  +++ Q + M   IK+ASL ++ Q +++MNYIH  I SL+P  + PPE EEP
Sbjct: 178 ---LKTQNEAMQTQIQTMKTFIKQASLWTEMQCRTLMNYIHVTIVSLVPTPIFPPELEEP 200

Query: 192 LSDVE 197
           L++VE
Sbjct: 238 LTEVE 200

[Close]

BLAST of PI0022697 vs. NCBI nr
Match: KAA0047757.1 (hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa] >TYK02391.1 hypothetical protein E5676_scaffold155G00960 [Cucumis melo var. makuwa])

HSP 1 Score: 84.3 bits (207), Expect = 1.4e-12
Identity = 47/80 (58.75%), Postives = 59/80 (73.75%), Query Frame = 0


Query: 54  ETRAPPSPKQIVDQQEVAAEENEDED-FYKFINEAIGKPMMDGLEDIFQNKADLHERAMR 113
           ET AP   KQI +QQ+ AA E+++ED ++KFI +  GKP+MDG +D+FQN+ DL E   R
Sbjct: 13  ETHAPLPLKQINNQQKNAAGESDNEDHYFKFIGDTFGKPVMDGFKDVFQNQVDLQECTWR 72

Query: 114 HEKQISDLELKIDN---HHQ 130
           HEKQI DLELKIDN   HHQ
Sbjct: 73  HEKQIQDLELKIDNCNQHHQ 92

[Close]

BLAST of PI0022697 vs. NCBI nr
Match: KAA0038296.1 (hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-12
Identity = 49/113 (43.36%), Postives = 70/113 (61.95%), Query Frame = 0


Query: 4   LCDTDFDAED-LREAEDSTLVPDESRHEEVLEEPIDDPLPKGKEIAFEEASETRAPPSPK 63
           +CD     ED ++  ED +LVP  S  +EVLE+ +DDPL KGK I  + ASET  P  PK
Sbjct: 11  VCDPFTPIEDEIKNLEDVSLVPVGSPRKEVLEKVVDDPLLKGKGITSKIASETHPPSPPK 70

Query: 64  QIVDQQEVAAEENEDEDFYKFINEAIGKPMMDGLEDIFQNKADLHERAMRHEK 116
           +   Q + A E ++ ++++KFI    GKPM DG ED+FQ +A+  E  +R +K
Sbjct: 71  ETSKQHDTAKESDDKDEYFKFIENNFGKPMRDGFEDMFQCQANFQESQLRSQK 123

[Close]

BLAST of PI0022697 vs. NCBI nr
Match: TYK29776.1 (hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 8.9e-12
Identity = 53/136 (38.97%), Postives = 87/136 (63.97%), Query Frame = 0


Query: 1   MQD-LCD-TDFDAEDLREAEDSTLVPDESRHEEVLEEPIDDPLPKGKEIAFEEASETRAP 60
           +QD LCD   F  +  +E+E++TL      ++ +LE+ IDDPL K K++  E+AS+TR P
Sbjct: 55  LQDSLCDLLAFIGDTCKESENTTLTLVVLSNKNILEKAIDDPLQKRKQVDSEDASKTRQP 114

Query: 61  PSPKQI-------VDQQEVAAEENEDEDFY-KFINEAIGKPMMDGLEDIFQNKADLHERA 120
             PKQ          Q+E   ++++D+++Y KFINE + +P+  G ED+FQ +A+L E  
Sbjct: 115 SPPKQSPKPTMQDTKQKEAIRDDDDDDEYYFKFINENVSQPLRYGFEDVFQCQANLQETQ 174

Query: 121 MRHEKQISDLELKIDN 127
           ++++K + DLELK D+
Sbjct: 175 LQNQKPLQDLELKPDS 190

The following BLAST results are available for this feature:

BLAST of PI0022697 vs.


Match Name	E-value	Identity	Description

BLAST of PI0022697 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D8Q5	3.0e-13	45.13	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VKU1	5.1e-13	32.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U0L9	6.7e-13	58.75	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T7V1	1.5e-12	43.36	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3E1H0	4.3e-12	38.97	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0022697 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK19850.1	6.2e-13	45.13	hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa]	[more]
KAA0067817.1	1.1e-12	32.43	hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa]	[more]
KAA0047757.1	1.4e-12	58.75	hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa] >TYK023...	[more]
KAA0038296.1	3.1e-12	43.36	hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]	[more]
TYK29776.1	8.9e-12	38.97	hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]	[more]

BLAST of PI0022697 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 96..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0022697.1	PI0022697.1	mRNA