PI0022630 (gene) Melon (PI 482460) v1

Overview


Name	PI0022630
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Gag-pol
Location	chr01: 8267838 .. 8268854 (+)
RNA-Seq Expression	PI0022630
Synteny	PI0022630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGTCCAGTACAAGTCCCACTCATTTGCAAGAGAAAAGGCGAGGGAGAGGCTTCAGGATCACCAAAGCAAAAGAAACATAAGGCCAAGGACCCCTGTGAACCAATGCCTCTTGCGATTGAGAGTCCCGCGAAGGTGAGAAAAATCAAAATCACCAAACCGCCTTCACCGTCGCAACCCCTTGAAGAGCCAAGCCTTCCCATAATCCAAATTCTTTCTCCCCAACAATCCAAAAGTCCAAGCTCTGCCCGCACAACCCAAATTGGCTCCACGCCAAACTCCCCGCGGCAAGAGGAAAATCCTTAATCTCTTGTCGCGCAAGCCCTTGACAATACCACATTCTCGCCAAACATAATTTCTGATGAGCAGCTCAACACGGGAATTGATGGATTTATGCAAGACCTCTGCGATACTGAGTTAGAAGATTTCATAGAGTCTCAAGACGCGACGTTGGCACCTGAGTCGCAAACCACTGTTCTTCTCGATGAGCCGGTCAATGAACCAACTCCACAAGAAAATCAAATAAATATTGTGGAAGTTGGCGAGACGCGGGCTCCTTCGCCGCCTAAGCAAACCACAAATCCACAACCCCACGCGACGGAAGAGAATGACGATGAGGAGTTCTTCAAATACATTGATGAGGCTGTCGTCAAGCCAATGACTAATGGATTTGAAGAAGTCTTTCAAACCCAAGTCAGTCTGAAAGAACTCGCGACGAACCATGAGAAGCAGATTTTAGACTTGGGAACAAAAGTGGAAAGCTATCATCAATCCCAAAAAGACCAACTCGCATCTGAAGTCGCAAGTCTGAAAGAGCAGAACAAGACGATTATGGGTTTAATCAAGAAAGCTTCGTTGCGGTCTGACAGGCAGTATAAGTCAATGATGAATTACATCCACACGACCATCACAAGCCTCGTGCCTAAGCTTGCCATTCCGCCTGAGTTCGAACAACCCCTTTCTGATGATGAAGATGACGCCACGGCAGGACCTTCTGACGCGGCTATAAACTAA

mRNA sequence

ATGGAAAGTCCAGTACAAGTCCCACTCATTTGCAAGAGAAAAGGCGAGGGAGAGGCTTCAGGATCACCAAAGCAAAAGAAACATAAGGCCAAGGACCCCTGTGAACCAATGCCTCTTGCGATTGAGAGTCCCGCGAAGCTCAACACGGGAATTGATGGATTTATGCAAGACCTCTGCGATACTGAGTTAGAAGATTTCATAGAGTCTCAAGACGCGACGTTGGCACCTGAGTCGCAAACCACTGTTCTTCTCGATGAGCCGGTCAATGAACCAACTCCACAAGAAAATCAAATAAATATTGTGGAAGTTGGCGAGACGCGGGCTCCTTCGCCGCCTAAGCAAACCACAAATCCACAACCCCACGCGACGGAAGAGAATGACGATGAGGAGTTCTTCAAATACATTGATGAGGCTGTCGTCAAGCCAATGACTAATGGATTTGAAGAAGTCTTTCAAACCCAAGTCAGTCTGAAAGAACTCGCGACGAACCATGAGAAGCAGATTTTAGACTTGGGAACAAAAGTGGAAAGCTATCATCAATCCCAAAAAGACCAACTCGCATCTGAAGTCGCAAGTCTGAAAGAGCAGAACAAGACGATTATGGGTTTAATCAAGAAAGCTTCGTTGCGGTCTGACAGGCAGTATAAGTCAATGATGAATTACATCCACACGACCATCACAAGCCTCGTGCCTAAGCTTGCCATTCCGCCTGAGTTCGAACAACCCCTTTCTGATGATGAAGATGACGCCACGGCAGGACCTTCTGACGCGGCTATAAACTAA

Coding sequence (CDS)

ATGGAAAGTCCAGTACAAGTCCCACTCATTTGCAAGAGAAAAGGCGAGGGAGAGGCTTCAGGATCACCAAAGCAAAAGAAACATAAGGCCAAGGACCCCTGTGAACCAATGCCTCTTGCGATTGAGAGTCCCGCGAAGCTCAACACGGGAATTGATGGATTTATGCAAGACCTCTGCGATACTGAGTTAGAAGATTTCATAGAGTCTCAAGACGCGACGTTGGCACCTGAGTCGCAAACCACTGTTCTTCTCGATGAGCCGGTCAATGAACCAACTCCACAAGAAAATCAAATAAATATTGTGGAAGTTGGCGAGACGCGGGCTCCTTCGCCGCCTAAGCAAACCACAAATCCACAACCCCACGCGACGGAAGAGAATGACGATGAGGAGTTCTTCAAATACATTGATGAGGCTGTCGTCAAGCCAATGACTAATGGATTTGAAGAAGTCTTTCAAACCCAAGTCAGTCTGAAAGAACTCGCGACGAACCATGAGAAGCAGATTTTAGACTTGGGAACAAAAGTGGAAAGCTATCATCAATCCCAAAAAGACCAACTCGCATCTGAAGTCGCAAGTCTGAAAGAGCAGAACAAGACGATTATGGGTTTAATCAAGAAAGCTTCGTTGCGGTCTGACAGGCAGTATAAGTCAATGATGAATTACATCCACACGACCATCACAAGCCTCGTGCCTAAGCTTGCCATTCCGCCTGAGTTCGAACAACCCCTTTCTGATGATGAAGATGACGCCACGGCAGGACCTTCTGACGCGGCTATAAACTAA

Protein sequence

MESPVQVPLICKRKGEGEASGSPKQKKHKAKDPCEPMPLAIESPAKLNTGIDGFMQDLCDTELEDFIESQDATLAPESQTTVLLDEPVNEPTPQENQINIVEVGETRAPSPPKQTTNPQPHATEENDDEEFFKYIDEAVVKPMTNGFEEVFQTQVSLKELATNHEKQILDLGTKVESYHQSQKDQLASEVASLKEQNKTIMGLIKKASLRSDRQYKSMMNYIHTTITSLVPKLAIPPEFEQPLSDDEDDATAGPSDAAIN

Homology

[Close]

BLAST of PI0022630 vs. ExPASy TrEMBL
Match: A0A5A7U0L9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00960 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.5e-08
Identity = 37/78 (47.44%), Postives = 53/78 (67.95%), Query Frame = 0


Query: 104 GETRAPSPPKQTTNPQPHATEENDDEE-FFKYIDEAVVKPMTNGFEEVFQTQVSLKELAT 163
           GET AP P KQ  N Q +A  E+D+E+ +FK+I +   KP+ +GF++VFQ QV L+E   
Sbjct: 12  GETHAPLPLKQINNQQKNAAGESDNEDHYFKFIGDTFGKPVMDGFKDVFQNQVDLQECTW 71

Query: 164 NHEKQILDLGTKVESYHQ 181
            HEKQI DL  K+++ +Q
Sbjct: 72  RHEKQIQDLELKIDNCNQ 89

[Close]

BLAST of PI0022630 vs. ExPASy TrEMBL
Match: A0A5D3E1H0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2208G00350 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.9e-08
Identity = 45/143 (31.47%), Postives = 75/143 (52.45%), Query Frame = 0


Query: 52  DGFMQDLCDTELEDFIESQDATLAPESQTTV---------LLDEPVNEPTPQENQINIVE 111
           D  +QDL    L D +     T      TT+         +L++ +++P  +  Q++  +
Sbjct: 48  DERLQDLLQDSLCDLLAFIGDTCKESENTTLTLVVLSNKNILEKAIDDPLQKRKQVDSED 107

Query: 112 VGETRAPSPPKQTTNPQPHAT--------EENDDEEFFKYIDEAVVKPMTNGFEEVFQTQ 171
             +TR PSPPKQ+  P    T        +++DDE +FK+I+E V +P+  GFE+VFQ Q
Sbjct: 108 ASKTRQPSPPKQSPKPTMQDTKQKEAIRDDDDDDEYYFKFINENVSQPLRYGFEDVFQCQ 167

Query: 172 VSLKELATNHEKQILDLGTKVES 178
            +L+E    ++K + DL  K +S
Sbjct: 168 ANLQETQLQNQKPLQDLELKPDS 190

[Close]

BLAST of PI0022630 vs. ExPASy TrEMBL
Match: A0A5A7TJU0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold320G00130 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.9e-08
Identity = 45/143 (31.47%), Postives = 75/143 (52.45%), Query Frame = 0


Query: 52  DGFMQDLCDTELEDFIESQDATLAPESQTTV---------LLDEPVNEPTPQENQINIVE 111
           D  +QDL    L D +     T      TT+         +L++ +++P  +  Q++  +
Sbjct: 93  DERLQDLLQDSLCDLLAFIGDTCKESENTTLTLVVLSNKNILEKAIDDPLQKRKQVDSED 152

Query: 112 VGETRAPSPPKQTTNPQPHAT--------EENDDEEFFKYIDEAVVKPMTNGFEEVFQTQ 171
             +TR PSPPKQ+  P    T        +++DDE +FK+I+E V +P+  GFE+VFQ Q
Sbjct: 153 ASKTRQPSPPKQSPKPTMQDTKQKEAIRDDDDDDEYYFKFINENVSQPLRYGFEDVFQCQ 212

Query: 172 VSLKELATNHEKQILDLGTKVES 178
            +L+E    ++K + DL  K +S
Sbjct: 213 ANLQETQLQNQKPLQDLELKPDS 235

[Close]

BLAST of PI0022630 vs. ExPASy TrEMBL
Match: A0A5A7VKU1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00210 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.2e-06
Identity = 55/185 (29.73%), Postives = 89/185 (48.11%), Query Frame = 0


Query: 64  EDFIESQDATLAP-ESQTTVLLDEPVNEPTPQENQINIVEVGETRAPSPPKQTTNPQPHA 123
           ++  + +DA L P  S    +L++ +++   +  QI    VG+T  PSPPKQ +  Q   
Sbjct: 58  DEIKDPKDAPLVPVGSPRKEVLEKNIDDSLLKGKQIVFEVVGQTYPPSPPKQRSKQQDTT 117

Query: 124 TEENDDEEFFKYIDEAVVKPMTNGFEEVFQTQVSLKELATNHEKQILDLGTKVESYHQSQ 183
            E +D++E+ K             FE++              E  I  L T+ E      
Sbjct: 118 KESDDEDEYVK-------------FEKI--------------ESDIAMLKTQNE------ 177

Query: 184 KDQLASEVASLKEQNKTIMGLIKKASLRSDRQYKSMMNYIHTTITSLVPKLAIPPEFEQP 243
                    +++ Q +T+   IK+ASL ++ Q +++MNYIH TI SLVP    PPE E+P
Sbjct: 178 ---------AMQTQIQTMKTFIKQASLWTEMQCRTLMNYIHVTIVSLVPTPIFPPELEEP 200

Query: 244 LSDDE 248
           L++ E
Sbjct: 238 LTEVE 200

[Close]

BLAST of PI0022630 vs. ExPASy TrEMBL
Match: A0A5A7URK6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00540 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 5.5e-06
Identity = 37/116 (31.90%), Postives = 60/116 (51.72%), Query Frame = 0


Query: 124 EENDDEEF-FKYIDEAVVKPMTNGFEEVFQTQVSLKELATNHEKQILDLGTKVESYHQSQ 183
           EE  DE++  K+ID+   KPM NGFE++   +  + EL T  +K                
Sbjct: 15  EETIDEDYTLKFIDDYACKPMNNGFEDIKGLKAEMNELKTQLQK---------------- 74

Query: 184 KDQLASEVASLKEQNKTIMGLIKKASLRSDRQYKSMMNYIHTTITSLVPKLAIPPE 239
                     ++EQN+T+MGL KK  + +D Q+KS + Y++  I +++P L +P E
Sbjct: 75  ----------IREQNETLMGLEKKNVMHTDVQFKSALRYLYAAIWNIIPILEVPTE 104

[Close]

BLAST of PI0022630 vs. NCBI nr
Match: KAA0047757.1 (hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa] >TYK02391.1 hypothetical protein E5676_scaffold155G00960 [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 9.3e-08
Identity = 37/78 (47.44%), Postives = 53/78 (67.95%), Query Frame = 0


Query: 104 GETRAPSPPKQTTNPQPHATEENDDEE-FFKYIDEAVVKPMTNGFEEVFQTQVSLKELAT 163
           GET AP P KQ  N Q +A  E+D+E+ +FK+I +   KP+ +GF++VFQ QV L+E   
Sbjct: 12  GETHAPLPLKQINNQQKNAAGESDNEDHYFKFIGDTFGKPVMDGFKDVFQNQVDLQECTW 71

Query: 164 NHEKQILDLGTKVESYHQ 181
            HEKQI DL  K+++ +Q
Sbjct: 72  RHEKQIQDLELKIDNCNQ 89

[Close]

BLAST of PI0022630 vs. NCBI nr
Match: TYK29776.1 (hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-07
Identity = 45/143 (31.47%), Postives = 75/143 (52.45%), Query Frame = 0


Query: 52  DGFMQDLCDTELEDFIESQDATLAPESQTTV---------LLDEPVNEPTPQENQINIVE 111
           D  +QDL    L D +     T      TT+         +L++ +++P  +  Q++  +
Sbjct: 48  DERLQDLLQDSLCDLLAFIGDTCKESENTTLTLVVLSNKNILEKAIDDPLQKRKQVDSED 107

Query: 112 VGETRAPSPPKQTTNPQPHAT--------EENDDEEFFKYIDEAVVKPMTNGFEEVFQTQ 171
             +TR PSPPKQ+  P    T        +++DDE +FK+I+E V +P+  GFE+VFQ Q
Sbjct: 108 ASKTRQPSPPKQSPKPTMQDTKQKEAIRDDDDDDEYYFKFINENVSQPLRYGFEDVFQCQ 167

Query: 172 VSLKELATNHEKQILDLGTKVES 178
            +L+E    ++K + DL  K +S
Sbjct: 168 ANLQETQLQNQKPLQDLELKPDS 190

[Close]

BLAST of PI0022630 vs. NCBI nr
Match: KAA0043584.1 (hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-07
Identity = 45/143 (31.47%), Postives = 75/143 (52.45%), Query Frame = 0


Query: 52  DGFMQDLCDTELEDFIESQDATLAPESQTTV---------LLDEPVNEPTPQENQINIVE 111
           D  +QDL    L D +     T      TT+         +L++ +++P  +  Q++  +
Sbjct: 93  DERLQDLLQDSLCDLLAFIGDTCKESENTTLTLVVLSNKNILEKAIDDPLQKRKQVDSED 152

Query: 112 VGETRAPSPPKQTTNPQPHAT--------EENDDEEFFKYIDEAVVKPMTNGFEEVFQTQ 171
             +TR PSPPKQ+  P    T        +++DDE +FK+I+E V +P+  GFE+VFQ Q
Sbjct: 153 ASKTRQPSPPKQSPKPTMQDTKQKEAIRDDDDDDEYYFKFINENVSQPLRYGFEDVFQCQ 212

Query: 172 VSLKELATNHEKQILDLGTKVES 178
            +L+E    ++K + DL  K +S
Sbjct: 213 ANLQETQLQNQKPLQDLELKPDS 235

[Close]

BLAST of PI0022630 vs. NCBI nr
Match: KAA0067817.1 (hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 62.0 bits (149), Expect = 8.7e-06
Identity = 55/185 (29.73%), Postives = 89/185 (48.11%), Query Frame = 0


Query: 64  EDFIESQDATLAP-ESQTTVLLDEPVNEPTPQENQINIVEVGETRAPSPPKQTTNPQPHA 123
           ++  + +DA L P  S    +L++ +++   +  QI    VG+T  PSPPKQ +  Q   
Sbjct: 58  DEIKDPKDAPLVPVGSPRKEVLEKNIDDSLLKGKQIVFEVVGQTYPPSPPKQRSKQQDTT 117

Query: 124 TEENDDEEFFKYIDEAVVKPMTNGFEEVFQTQVSLKELATNHEKQILDLGTKVESYHQSQ 183
            E +D++E+ K             FE++              E  I  L T+ E      
Sbjct: 118 KESDDEDEYVK-------------FEKI--------------ESDIAMLKTQNE------ 177

Query: 184 KDQLASEVASLKEQNKTIMGLIKKASLRSDRQYKSMMNYIHTTITSLVPKLAIPPEFEQP 243
                    +++ Q +T+   IK+ASL ++ Q +++MNYIH TI SLVP    PPE E+P
Sbjct: 178 ---------AMQTQIQTMKTFIKQASLWTEMQCRTLMNYIHVTIVSLVPTPIFPPELEEP 200

Query: 244 LSDDE 248
           L++ E
Sbjct: 238 LTEVE 200

[Close]

BLAST of PI0022630 vs. NCBI nr
Match: KAA0056255.1 (hypothetical protein E6C27_scaffold226G00220 [Cucumis melo var. makuwa] >TYK05244.1 hypothetical protein E5676_scaffold108G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-05
Identity = 37/116 (31.90%), Postives = 60/116 (51.72%), Query Frame = 0


Query: 124 EENDDEEF-FKYIDEAVVKPMTNGFEEVFQTQVSLKELATNHEKQILDLGTKVESYHQSQ 183
           EE  DE++  K+ID+   KPM NGFE++   +  + EL T  +K                
Sbjct: 15  EETIDEDYTLKFIDDYACKPMNNGFEDIKGLKAEMNELKTQLQK---------------- 74

Query: 184 KDQLASEVASLKEQNKTIMGLIKKASLRSDRQYKSMMNYIHTTITSLVPKLAIPPE 239
                     ++EQN+T+MGL KK  + +D Q+KS + Y++  I +++P L +P E
Sbjct: 75  ----------IREQNETLMGLEKKNVMHTDVQFKSALRYLYAAIWNIIPILEVPTE 104

The following BLAST results are available for this feature:

BLAST of PI0022630 vs.


Match Name	E-value	Identity	Description

BLAST of PI0022630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U0L9	4.5e-08	47.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3E1H0	5.9e-08	31.47	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TJU0	5.9e-08	31.47	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VKU1	4.2e-06	29.73	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7URK6	5.5e-06	31.90	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0022630 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047757.1	9.3e-08	47.44	hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa] >TYK023...	[more]
TYK29776.1	1.2e-07	31.47	hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]	[more]
KAA0043584.1	1.2e-07	31.47	hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]	[more]
KAA0067817.1	8.7e-06	29.73	hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa]	[more]
KAA0056255.1	1.1e-05	31.90	hypothetical protein E6C27_scaffold226G00220 [Cucumis melo var. makuwa] >TYK0524...	[more]

BLAST of PI0022630 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..35

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0022630.1	PI0022630.1	mRNA