Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAATCTACTCAAATCTATGGCAATATCGCAAGTCAACGCCGCAGGAGGCTCTGTGCACACGGCTAACCAGATTGATGATATGGGATGTGTGGGATGCGGCGGTCCTCATAACACTAACGCATGCCCACTCAACACTGAAACTGTCGCGTTCGTAAGGAACGAACCCTTCTCCAATATTTACAACCCTGGTTGGAGGAACCATCCCAACTTTGGATGGGGAGGATCGGGTCAACAAAATCAAGGGCGACATGGTGGTCAAGGTGACCATCGAGGGGAAGCATCTGGCTCCCACGCGAGGTACCAGAACAATAGACCCCAACACTCCCATCATCAACAACAACCCACCACCACTGCTCTATCTACCTCATCCATGGAAAACCTCCTCCGCGAATACATGCAGAAAAATGATGCTCTTCTGCAAAGTCAAGCTTCATCAATTCGTAATCTGGAGGTACAATTAGGGCAGCTCGCCAGCGATTTCTCCGGAAGACCGCAAGGATCCCTCCCAAGCAATACAGAAACACCAAATCAGGCGGGGGGATCTGGTAAAGAGAAGTGTCACATGGTGACACTACGCAGCGGAAGGAATTTAACCATCCGCGAGCTTGACTCTGAACGTAGCCACTCCAATTCTAATTCTACTGCCGAGATCGGCAGCTCAAGTAAAATTCCTACTCTTGTATATTTTCCTTTAACTGATAATGTTTCTTCCTCGTAG
mRNA sequence
ATGAACAATCTACTCAAATCTATGGCAATATCGCAAGTCAACGCCGCAGGAGGCTCTGTGCACACGGCTAACCAGATTGATGATATGGGATGTGTGGGATGCGGCGGTCCTCATAACACTAACGCATGCCCACTCAACACTGAAACTGTCGCGTTCGTAAGGAACGAACCCTTCTCCAATATTTACAACCCTGGTTGGAGGAACCATCCCAACTTTGGATGGGGAGGATCGGGTCAACAAAATCAAGGGCGACATGGTGGTCAAGGTGACCATCGAGGGGAAGCATCTGGCTCCCACGCGAGGTACCAGAACAATAGACCCCAACACTCCCATCATCAACAACAACCCACCACCACTGCTCTATCTACCTCATCCATGGAAAACCTCCTCCGCGAATACATGCAGAAAAATGATGCTCTTCTGCAAAGTCAAGCTTCATCAATTCGTAATCTGGAGGTACAATTAGGGCAGCTCGCCAGCGATTTCTCCGGAAGACCGCAAGGATCCCTCCCAAGCAATACAGAAACACCAAATCAGGCGGGGGGATCTGGTAAAGAGAAGTGTCACATGGTGACACTACGCAGCGGAAGGAATTTAACCATCCGCGAGCTTGACTCTGAACGTAGCCACTCCAATTCTAATTCTACTGCCGAGATCGGCAGCTCAAGTAAAATTCCTACTCTTGTATATTTTCCTTTAACTGATAATGTTTCTTCCTCGTAG
Coding sequence (CDS)
ATGAACAATCTACTCAAATCTATGGCAATATCGCAAGTCAACGCCGCAGGAGGCTCTGTGCACACGGCTAACCAGATTGATGATATGGGATGTGTGGGATGCGGCGGTCCTCATAACACTAACGCATGCCCACTCAACACTGAAACTGTCGCGTTCGTAAGGAACGAACCCTTCTCCAATATTTACAACCCTGGTTGGAGGAACCATCCCAACTTTGGATGGGGAGGATCGGGTCAACAAAATCAAGGGCGACATGGTGGTCAAGGTGACCATCGAGGGGAAGCATCTGGCTCCCACGCGAGGTACCAGAACAATAGACCCCAACACTCCCATCATCAACAACAACCCACCACCACTGCTCTATCTACCTCATCCATGGAAAACCTCCTCCGCGAATACATGCAGAAAAATGATGCTCTTCTGCAAAGTCAAGCTTCATCAATTCGTAATCTGGAGGTACAATTAGGGCAGCTCGCCAGCGATTTCTCCGGAAGACCGCAAGGATCCCTCCCAAGCAATACAGAAACACCAAATCAGGCGGGGGGATCTGGTAAAGAGAAGTGTCACATGGTGACACTACGCAGCGGAAGGAATTTAACCATCCGCGAGCTTGACTCTGAACGTAGCCACTCCAATTCTAATTCTACTGCCGAGATCGGCAGCTCAAGTAAAATTCCTACTCTTGTATATTTTCCTTTAACTGATAATGTTTCTTCCTCGTAG
Protein sequence
MNNLLKSMAISQVNAAGGSVHTANQIDDMGCVGCGGPHNTNACPLNTETVAFVRNEPFSNIYNPGWRNHPNFGWGGSGQQNQGRHGGQGDHRGEASGSHARYQNNRPQHSHHQQQPTTTALSTSSMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSGRPQGSLPSNTETPNQAGGSGKEKCHMVTLRSGRNLTIRELDSERSHSNSNSTAEIGSSSKIPTLVYFPLTDNVSSS
Homology
BLAST of PI0022537 vs. ExPASy TrEMBL
Match:
A0A5D3D2S0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00800 PE=4 SV=1)
HSP 1 Score: 146.7 bits (369), Expect = 1.2e-31
Identity = 91/189 (48.15%), Postives = 111/189 (58.73%), Query Frame = 0
Query: 1 MNNLLKSMAISQVNAAGGSVHTANQIDDMGCVGCGGPHNTNACPLNTETVAFVRNEPFSN 60
M LL+SMA+SQV+A G V Q+D+M VGCG PH T+AC LN E A+V++ P+SN
Sbjct: 57 MKKLLQSMALSQVDAVGNYVQAVKQVDEMRPVGCGEPHTTDACLLNAEIAAYVKSYPYSN 116
Query: 61 IYNPGWRNHPNFGWGGSGQQNQGRHGGQGDHRGEASGSHARYQNNRPQHS--HHQQQPTT 120
YN G++RGEA H + +RP +S HQQ T
Sbjct: 117 TYN------------------------AGNYRGEAP-DHRQRHYDRPHYSAPQHQQATTN 176
Query: 121 TALSTSSMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSGRPQGSLPSNTETPN 180
T S SSM LLR+YMQ+ DA +QSQ +SI NLE+ LGQLA DFSGRP GSLPSN E PN
Sbjct: 177 TPSSFSSMVALLRKYMQRKDAFMQSQTTSIINLEIHLGQLAKDFSGRPHGSLPSNIEVPN 220
Query: 181 QAGGSGKEK 188
G K K
Sbjct: 237 HNNGVHKNK 220
BLAST of PI0022537 vs. ExPASy TrEMBL
Match:
A0A5A7TGS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00540 PE=4 SV=1)
HSP 1 Score: 129.4 bits (324), Expect = 2.0e-26
Identity = 73/112 (65.18%), Postives = 85/112 (75.89%), Query Frame = 0
Query: 128 NLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSGRPQGSLPSNTETPNQAGGSGKEK 187
N ++ Q NDALLQSQASSI+NLE+QLGQL S+ S RP+GSLPSNTETPNQ GGSGKEK
Sbjct: 18 NFIQAMQQWNDALLQSQASSIKNLELQLGQLFSNISRRPKGSLPSNTETPNQVGGSGKEK 77
Query: 188 CHMVTLRSGRNLTIRELDSERSHSNSNSTAEIGSSSKIPTLVYFPLTDNVSS 240
C +VTLRS RNLTIRE ER +S S ST +IGS+S + LT+N SS
Sbjct: 78 CQVVTLRSRRNLTIREPKFERRNSTSTSTTKIGSASNDSNPLNSSLTNNTSS 129
BLAST of PI0022537 vs. ExPASy TrEMBL
Match:
A0A6J1DYG0 (uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025764 PE=4 SV=1)
HSP 1 Score: 120.9 bits (302), Expect = 7.1e-24
Identity = 82/213 (38.50%), Postives = 115/213 (53.99%), Query Frame = 0
Query: 1 MNNLLKSMAISQVNAAGGSVHTAN----------QIDDMGCVGCGGPHNTNACPLNTETV 60
MN LK M + N + Q++D+ C C H + CP N +V
Sbjct: 66 MNQRLKEMVLGLKNPLATPIQPVQSDYCTPAPVCQVNDLICSFCSENHIYDXCPHNPASV 125
Query: 61 AFV-----RN-EPFSNIYNPGWRNHPNFGWGGSGQQNQGRHGGQGDHRGEASGSHARYQN 120
+V RN P+SN YNPGWR+HPNF W G G + G + GQ + +
Sbjct: 126 FYVGHGNNRNFNPYSNTYNPGWRHHPNFSWXGQG-GSXGFNQGQSQQNKQPYVPPTQQYI 185
Query: 121 NRPQHSHHQQQPTTTAL-STSSMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFS 180
PQ ++Q+ T + S++EN+++EYM + DA++QSQA+S+RN E QLGQLA++
Sbjct: 186 PPPQQRYNQRTQTPPVQNNNSNLENMMKEYMARTDAVIQSQAASMRNFETQLGQLANELK 245
Query: 181 GRPQGSLPSNTETPNQAGGSGKEKCHMVTLRSG 197
RPQGS P +TE P + GKE+C VTLRSG
Sbjct: 246 NRPQGSFPXHTELPKR---EGKEQCKAVTLRSG 274
BLAST of PI0022537 vs. ExPASy TrEMBL
Match:
A0A6J1BDW4 (uncharacterized protein LOC110426584 OS=Herrania umbratica OX=108875 GN=LOC110426584 PE=4 SV=1)
HSP 1 Score: 119.0 bits (297), Expect = 2.7e-23
Identity = 80/198 (40.40%), Postives = 107/198 (54.04%), Query Frame = 0
Query: 31 CVGCGGPHNTNACPLNTETVAFV------RNEPFSNIYNPGWRNHPNFGW-GGSGQQNQG 90
C CG H+ + CP N+E+V FV +N P+SN YNPGWRNHPNF W +G N
Sbjct: 56 CEMCGDSHSYDQCPYNSESVQFVGNFNRQQNNPYSNTYNPGWRNHPNFSWSNNAGPSNPK 115
Query: 91 RHGGQGDHRGEASGSHARYQNNRPQHSHHQQQPTTTALSTSSMENLLREYMQKNDALLQS 150
G H Q RPQ S + Q +E LL +Y+ K DA++QS
Sbjct: 116 PIMPPGFH-----------QQARPQISEKKSQ----------LEELLLQYISKTDAIIQS 175
Query: 151 QASSIRNLEVQLGQLASDFSGRPQGSLPSNTETPNQAGGSGKEKCHMVTLRSGRNL---T 210
Q +S+RNLE Q+GQLA+ + RPQGSLPS+T Q GKE+C +TLRSG+ +
Sbjct: 176 QGASLRNLETQVGQLANSINNRPQGSLPSDT----QINPKGKEQCQAITLRSGKEIEGVN 228
Query: 211 IRELDSERSHSNSNSTAE 219
+ ++SE H + E
Sbjct: 236 QKAVESEIEHVDKEGMCE 228
BLAST of PI0022537 vs. ExPASy TrEMBL
Match:
A0A6J0ZX64 (LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica OX=108875 GN=LOC110412945 PE=4 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 1.7e-22
Identity = 76/197 (38.58%), Postives = 104/197 (52.79%), Query Frame = 0
Query: 31 CVGCGGPHNTNACPLNTETVAFV------RNEPFSNIYNPGWRNHPNFGWGGSGQQNQGR 90
C CG H+ + CP N+E+V FV +N P+SN YNPGWRNHPNF W +
Sbjct: 313 CEMCGDSHSYDQCPYNSESVQFVGNFNRQQNNPYSNTYNPGWRNHPNFSWSNNA------ 372
Query: 91 HGGQGDHRGEASGSHARYQNNRPQHSHHQQQPTTTALSTSSMENLLREYMQKNDALLQSQ 150
G + Q RPQ + Q +E LL +Y+ K DA++QSQ
Sbjct: 373 ----GPSNPKPIMPPGFQQQARPQIPEKKSQ----------LEELLLQYISKTDAIIQSQ 432
Query: 151 ASSIRNLEVQLGQLASDFSGRPQGSLPSNTETPNQAGGSGKEKCHMVTLRSGRNL---TI 210
+S+RNLE Q+GQLA+ + RPQGSLPS+T Q GKE+C +TLRSG+ +
Sbjct: 433 GASLRNLETQVGQLANSINNRPQGSLPSDT----QINPKGKEQCQAITLRSGKEIEGVNQ 485
Query: 211 RELDSERSHSNSNSTAE 219
+ ++SE H + E
Sbjct: 493 KAVESEIEHVDKEGMCE 485
BLAST of PI0022537 vs. NCBI nr
Match:
XP_030498047.1 (uncharacterized protein LOC115713707 [Cannabis sativa])
HSP 1 Score: 154.1 bits (388), Expect = 1.6e-33
Identity = 96/208 (46.15%), Postives = 124/208 (59.62%), Query Frame = 0
Query: 1 MNNLLKSMAISQVNAAGGSVHTANQID--DMGCVGCGGPHNTNACPLNTETVAFV----- 60
M N+LK+M + GGSV A I ++ CV CG H CP N +V +V
Sbjct: 111 MTNILKNMNM------GGSVQPAAAIQRAEISCVYCGDGHTFENCPSNPASVCYVGNQNF 170
Query: 61 --RNEPFSNIYNPGWRNHPNFGWGGSGQQNQGRHGGQGDHRGEASGSHARYQNNRPQHSH 120
N P+SN YNP W++HPNF WGG G + G G +G+ S Q RPQ SH
Sbjct: 171 NRNNNPYSNSYNPAWKHHPNFSWGGQGASSSGAQG-----QGKQSFPPGFSQQPRPQQSH 230
Query: 121 HQQQPTTTALSTSSMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSGRPQGSLP 180
Q TSS+E+L+R+YM KNDA++QSQA+S+RNLEVQLGQLA++ RPQG+LP
Sbjct: 231 QPQ-----GSQTSSLESLMRDYMAKNDAVIQSQAASLRNLEVQLGQLANNLKNRPQGTLP 290
Query: 181 SNTETPNQAGGSGKEKCHMVTLRSGRNL 200
S+TE P + GKE C +TLRSG+ L
Sbjct: 291 SDTENPRR---DGKEHCKAITLRSGKIL 299
BLAST of PI0022537 vs. NCBI nr
Match:
XP_030509259.1 (uncharacterized protein LOC115723937 [Cannabis sativa])
HSP 1 Score: 151.8 bits (382), Expect = 7.7e-33
Identity = 96/206 (46.60%), Postives = 120/206 (58.25%), Query Frame = 0
Query: 1 MNNLLKSMAISQVNAAGGSVHTANQID--DMGCVGCGGPHNTNACPLNTETVAFV----- 60
M N+LK+M + GGSV A I ++ CV CG H CP N +V +V
Sbjct: 271 MTNILKNMNM------GGSVQPAAAIQRAEISCVYCGDGHTFENCPSNPASVCYVGNQNF 330
Query: 61 --RNEPFSNIYNPGWRNHPNFGWGGSGQQNQGRHGGQGDHRGEASGSHARYQNNRPQHSH 120
N P+SN YNP W++HPNF WGG G + G QG S Q RPQ H
Sbjct: 331 NRNNNPYSNSYNPAWKHHPNFSWGGQGASSSGAQQAQGKQSFPPGFS----QQPRPQQPH 390
Query: 121 HQQQPTTTALSTSSMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSGRPQGSLP 180
Q TSS+E+L+R+YM KNDA++QSQA+S+RNLEVQLGQLA+D RPQG+LP
Sbjct: 391 QPQ-----GSQTSSLESLMRDYMAKNDAVIQSQAASLRNLEVQLGQLANDLKNRPQGTLP 450
Query: 181 SNTETPNQAGGSGKEKCHMVTLRSGR 198
S+TE P + GKE C VTLRSG+
Sbjct: 451 SDTENPRR---DGKEHCKAVTLRSGK 458
BLAST of PI0022537 vs. NCBI nr
Match:
XP_030507648.1 (uncharacterized protein LOC115722545 [Cannabis sativa])
HSP 1 Score: 147.1 bits (370), Expect = 1.9e-31
Identity = 93/208 (44.71%), Postives = 124/208 (59.62%), Query Frame = 0
Query: 1 MNNLLKSMAISQVNAAGGSVHTANQID--DMGCVGCGGPHNTNACPLNTETVAFV----- 60
M N+LK+M + GGSV A I ++ CV CG H CP N +V +V
Sbjct: 205 MTNILKNMNM------GGSVQPAAAIQRAEISCVYCGDGHTFENCPSNLASVCYVGNQNF 264
Query: 61 --RNEPFSNIYNPGWRNHPNFGWGGSGQQNQGRHGGQGDHRGEASGSHARYQNNRPQHSH 120
N P+SN YNP W++HPNF WGG G + G QG + G + ++++PQ S
Sbjct: 265 NRNNNPYSNSYNPAWKHHPNFSWGGQGASSSGAQQAQG-KQSFPPGFSQQPRSHQPQGS- 324
Query: 121 HQQQPTTTALSTSSMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSGRPQGSLP 180
TSS+E+L+R+YM KNDA++QSQA+S+RNLEVQLGQLA+D RPQG+LP
Sbjct: 325 ----------QTSSLESLMRDYMAKNDAVIQSQAASLRNLEVQLGQLANDLKNRPQGTLP 384
Query: 181 SNTETPNQAGGSGKEKCHMVTLRSGRNL 200
S+TE P + GKE C +TLRSG+ L
Sbjct: 385 SDTENPRR---DGKEHCKAITLRSGKIL 391
BLAST of PI0022537 vs. NCBI nr
Match:
KAA0040852.1 (hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa] >TYK17828.1 hypothetical protein E5676_scaffold306G00800 [Cucumis melo var. makuwa])
HSP 1 Score: 146.7 bits (369), Expect = 2.5e-31
Identity = 91/189 (48.15%), Postives = 111/189 (58.73%), Query Frame = 0
Query: 1 MNNLLKSMAISQVNAAGGSVHTANQIDDMGCVGCGGPHNTNACPLNTETVAFVRNEPFSN 60
M LL+SMA+SQV+A G V Q+D+M VGCG PH T+AC LN E A+V++ P+SN
Sbjct: 57 MKKLLQSMALSQVDAVGNYVQAVKQVDEMRPVGCGEPHTTDACLLNAEIAAYVKSYPYSN 116
Query: 61 IYNPGWRNHPNFGWGGSGQQNQGRHGGQGDHRGEASGSHARYQNNRPQHS--HHQQQPTT 120
YN G++RGEA H + +RP +S HQQ T
Sbjct: 117 TYN------------------------AGNYRGEAP-DHRQRHYDRPHYSAPQHQQATTN 176
Query: 121 TALSTSSMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSGRPQGSLPSNTETPN 180
T S SSM LLR+YMQ+ DA +QSQ +SI NLE+ LGQLA DFSGRP GSLPSN E PN
Sbjct: 177 TPSSFSSMVALLRKYMQRKDAFMQSQTTSIINLEIHLGQLAKDFSGRPHGSLPSNIEVPN 220
Query: 181 QAGGSGKEK 188
G K K
Sbjct: 237 HNNGVHKNK 220
BLAST of PI0022537 vs. NCBI nr
Match:
XP_030497803.1 (uncharacterized protein LOC115713460 [Cannabis sativa])
HSP 1 Score: 145.2 bits (365), Expect = 7.3e-31
Identity = 93/206 (45.15%), Postives = 115/206 (55.83%), Query Frame = 0
Query: 1 MNNLLKSMAISQVNAAGGSVHTANQID--DMGCVGCGGPHNTNACPLNTETVAFV----- 60
M N+LK+M + GGSV A I CV CG H CP N +V +V
Sbjct: 263 MTNILKNMNM------GGSVQPAAAIQRAKNSCVYCGDGHTFENCPSNLASVCYVGNQNF 322
Query: 61 --RNEPFSNIYNPGWRNHPNFGWGGSGQQNQGRHGGQGDHRGEASGSHARYQNNRPQHSH 120
N P+SN YNP W++HPNF WGG G+Q S Q RPQ H
Sbjct: 323 NRNNNPYSNSYNPAWKHHPNFSWGGQGKQ---------------SFPPGFSQQPRPQQPH 382
Query: 121 HQQQPTTTALSTSSMENLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSGRPQGSLP 180
Q TSS+E+L+R+YM KND ++QSQA+S+RNLEVQLGQLA+D RPQG+LP
Sbjct: 383 QPQ-----GSQTSSLESLMRDYMAKNDTVIQSQAASLRNLEVQLGQLANDLKNRPQGTLP 439
Query: 181 SNTETPNQAGGSGKEKCHMVTLRSGR 198
S+TE P + GKE C VTLRSG+
Sbjct: 443 SDTENPRR---DGKEHCKAVTLRSGK 439
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3D2S0 | 1.2e-31 | 48.15 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7TGS2 | 2.0e-26 | 65.18 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1DYG0 | 7.1e-24 | 38.50 | uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1BDW4 | 2.7e-23 | 40.40 | uncharacterized protein LOC110426584 OS=Herrania umbratica OX=108875 GN=LOC11042... | [more] |
A0A6J0ZX64 | 1.7e-22 | 38.58 | LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica ... | [more] |
Match Name | E-value | Identity | Description | |
XP_030498047.1 | 1.6e-33 | 46.15 | uncharacterized protein LOC115713707 [Cannabis sativa] | [more] |
XP_030509259.1 | 7.7e-33 | 46.60 | uncharacterized protein LOC115723937 [Cannabis sativa] | [more] |
XP_030507648.1 | 1.9e-31 | 44.71 | uncharacterized protein LOC115722545 [Cannabis sativa] | [more] |
KAA0040852.1 | 2.5e-31 | 48.15 | hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa] >TYK1782... | [more] |
XP_030497803.1 | 7.3e-31 | 45.15 | uncharacterized protein LOC115713460 [Cannabis sativa] | [more] |
Match Name | E-value | Identity | Description | |