Homology
BLAST of PI0022518 vs. ExPASy Swiss-Prot
Match:
Q5RC80 (RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 SV=1)
HSP 1 Score: 215.3 bits (547), Expect = 1.9e-54
Identity = 187/526 (35.55%), Postives = 257/526 (48.86%), Query Frame = 0
Query: 96 RKIGKRGQRRESGREKQERSRRSRSRSERHRSDRDDGIRERSRDNE-LREREKERESRER 155
+K R + E R K + +RSR R + R+ R+RSR E R R + R+ R R
Sbjct: 36 KKSKSRSRSHERKRSKSKERKRSRDRERKKSKSRE---RKRSRSKERRRSRSRSRDRRFR 95
Query: 156 GR-DGRYFYKLLTCSVLMQLG---SLLLHQFHLMTLLRYKDKKDETAEP---EADPERDQ 215
GR Y ++ ++G S+ L + + ++ K EP ERD
Sbjct: 96 GRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPEERDA 155
Query: 216 RTVFAYQFKG--TERDVYEFFSRAGKVCMLVKLQSAVLGAIGEKHQIKRRSRVLHSMEYV 275
RTVF Q RD+ EFFS GKV + + R SR + YV
Sbjct: 156 RTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISD-------------RNSRRSKGIAYV 215
Query: 276 EFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLY 335
EFVD SVP+AI L+GQ +L P++V+ S+AEKN+ A + S G RLY
Sbjct: 216 EFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR------AAAMANNLQKGSAGPMRLY 275
Query: 336 VGNLHPNITEDNLRQVFGAFGTVELVQMPLD-ESGHCKGFGFIQFTRLEDARNALSLNGQ 395
VG+LH NITED LR +F FG +E +Q+ +D E+G KG+GFI F+ E A+ AL
Sbjct: 276 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 335
Query: 396 LEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSI 455
E+AGR +KV VT++ +S D DE + G+ L + R LM +L
Sbjct: 336 FELAGRPMKVGHVTERTDASS-ASSFLDSDELERTGIDLGTTGRLQLMARL--------- 395
Query: 456 AGSLGTHVVNNTGATVPVAPILGGATISSLGVG------TSLAAFPAFPALGAGVQVPPV 515
TG +P A SL G T L+ AL A V P+
Sbjct: 396 --------AEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPL 455
Query: 516 TANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSA-G 575
++C L NMF+P E E +D +I+DDV EEC++ G + HIYVDKNSA G
Sbjct: 456 A---------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQG 512
Query: 576 FVYLRFEKSESALEAQRALNGRWFAGKMIGATFMDIPIYEAKFPDS 604
VY++ +A+ A AL+GRWFAGKMI A ++ +P Y FPDS
Sbjct: 516 NVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDS 512
BLAST of PI0022518 vs. ExPASy Swiss-Prot
Match:
Q14498 (RNA-binding protein 39 OS=Homo sapiens OX=9606 GN=RBM39 PE=1 SV=2)
HSP 1 Score: 213.8 bits (543), Expect = 5.5e-54
Identity = 188/529 (35.54%), Postives = 262/529 (49.53%), Query Frame = 0
Query: 96 RKIGKRGQRRESGREKQERSRRSRSRSERHRSDRDDGIRERSRDNE-LREREKERESRER 155
+K R + E R K + +RSR R + R+ R+RSR E R R + R+ R R
Sbjct: 36 KKSKSRSRSHERKRSKSKERKRSRDRERKKSKSRE---RKRSRSKERRRSRSRSRDRRFR 95
Query: 156 GR-DGRYFYKLLTCSVLMQLG---SLLLHQFHLMTLLRYKDKKDETAEP---EADPERDQ 215
GR Y ++ ++G S+ L + + ++ K EP ERD
Sbjct: 96 GRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPEERDA 155
Query: 216 RTVFAYQFKG--TERDVYEFFSRAGKVCMLVKLQSAVLGAIGEKHQIKRRSRVLHSMEYV 275
RTVF Q RD+ EFFS GKV + + R SR + YV
Sbjct: 156 RTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISD-------------RNSRRSKGIAYV 215
Query: 276 EFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLY 335
EFVD SVP+AI L+GQ +L P++V+ S+AEKN+ A + S G RLY
Sbjct: 216 EFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR------AAAMANNLQKGSAGPMRLY 275
Query: 336 VGNLHPNITEDNLRQVFGAFGTVELVQMPLD-ESGHCKGFGFIQFTRLEDARNALSLNGQ 395
VG+LH NITED LR +F FG +E +Q+ +D E+G KG+GFI F+ E A+ AL
Sbjct: 276 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 335
Query: 396 LEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKL-DRTG---- 455
E+AGR +KV VT++ +S D DE + G+ L + R LM +L + TG
Sbjct: 336 FELAGRPMKVGHVTERTDASS-ASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIP 395
Query: 456 ----AASSIAGSLGTHVVNNTGATVPVAPILGGATISSLGVGTSLAAFPAFPALGAGVQV 515
A ++GSL V + + L T +S AL A V
Sbjct: 396 PAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEAS--------------ALAAAASV 455
Query: 516 PPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNS 575
P+ ++C L NMF+P E E +D +I+DDV EEC++ G + HIYVDKNS
Sbjct: 456 QPLA---------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNS 515
Query: 576 A-GFVYLRFEKSESALEAQRALNGRWFAGKMIGATFMDIPIYEAKFPDS 604
A G VY++ +A+ A AL+GRWFAGKMI A ++ +P Y FPDS
Sbjct: 516 AQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDS 518
BLAST of PI0022518 vs. ExPASy Swiss-Prot
Match:
Q8VH51 (RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2)
HSP 1 Score: 213.8 bits (543), Expect = 5.5e-54
Identity = 188/529 (35.54%), Postives = 262/529 (49.53%), Query Frame = 0
Query: 96 RKIGKRGQRRESGREKQERSRRSRSRSERHRSDRDDGIRERSRDNE-LREREKERESRER 155
+K R + E R K + +RSR R + R+ R+RSR E R R + R+ R R
Sbjct: 36 KKSKSRSRSHERKRSKSKERKRSRDRERKKSKSRE---RKRSRSKERRRSRSRSRDRRFR 95
Query: 156 GR-DGRYFYKLLTCSVLMQLG---SLLLHQFHLMTLLRYKDKKDETAEP---EADPERDQ 215
GR Y ++ ++G S+ L + + ++ K EP ERD
Sbjct: 96 GRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPEERDA 155
Query: 216 RTVFAYQFKG--TERDVYEFFSRAGKVCMLVKLQSAVLGAIGEKHQIKRRSRVLHSMEYV 275
RTVF Q RD+ EFFS GKV + + R SR + YV
Sbjct: 156 RTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISD-------------RNSRRSKGIAYV 215
Query: 276 EFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLY 335
EFVD SVP+AI L+GQ +L P++V+ S+AEKN+ A + S G RLY
Sbjct: 216 EFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR------AAAMANNLQKGSAGPMRLY 275
Query: 336 VGNLHPNITEDNLRQVFGAFGTVELVQMPLD-ESGHCKGFGFIQFTRLEDARNALSLNGQ 395
VG+LH NITED LR +F FG +E +Q+ +D E+G KG+GFI F+ E A+ AL
Sbjct: 276 VGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG 335
Query: 396 LEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKL-DRTG---- 455
E+AGR +KV VT++ +S D DE + G+ L + R LM +L + TG
Sbjct: 336 FELAGRPMKVGHVTERTDASS-ASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIP 395
Query: 456 ----AASSIAGSLGTHVVNNTGATVPVAPILGGATISSLGVGTSLAAFPAFPALGAGVQV 515
A ++GSL V + + L T +S AL A V
Sbjct: 396 PAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEAS--------------ALAAAASV 455
Query: 516 PPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNS 575
P+ ++C L NMF+P E E +D +I+DDV EEC++ G + HIYVDKNS
Sbjct: 456 QPLA---------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNS 515
Query: 576 A-GFVYLRFEKSESALEAQRALNGRWFAGKMIGATFMDIPIYEAKFPDS 604
A G VY++ +A+ A AL+GRWFAGKMI A ++ +P Y FPDS
Sbjct: 516 AQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDS 518
BLAST of PI0022518 vs. ExPASy Swiss-Prot
Match:
O13845 (RNA-binding protein rsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rsd1 PE=1 SV=2)
HSP 1 Score: 148.3 bits (373), Expect = 2.8e-34
Identity = 150/511 (29.35%), Postives = 229/511 (44.81%), Query Frame = 0
Query: 101 RGQRRESGREKQERSRRSRSRSERHRSDRDDGIRE---RSRDNELREREKERESRERGRD 160
R R R++ RS RSR S R R DD R SR + R R +ER SR R
Sbjct: 143 RSPVRSRDRDRSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRRRYEERSSRS-SRA 202
Query: 161 GRYFYKLLTCSVLMQLGSLLLHQFHLMTLLRYKDKKDETAEPEADPERDQRTVFAYQFKG 220
Y Y+ L R + + E + ++ ERD+RTVF Q
Sbjct: 203 HDYDYEDLR------------DDDRSHERKRSRSRPRERSSKLSEEERDRRTVFVSQLAN 262
Query: 221 --TERDVYEFFSRAGKVCMLVKLQSAVLGAIGEKHQIKRRSRVLHSMEYVEFVDAMSVPM 280
T R++Y+FF +AG V A + +I RS+ + YVEF SV
Sbjct: 263 RLTSRELYDFFEQAG----------PVRDAQIVRDKISGRSK---GVAYVEFCHEDSVQA 322
Query: 281 AIALSGQLLLSQPVMVKPSEAEKN-QVQSTSAAGGPGGAMGPYSGGARRLYVGNLHPNIT 340
AIALSG+ LL PV+V+ +EAEKN + + + A P+ RL V N+H N+T
Sbjct: 323 AIALSGKRLLGLPVIVQLTEAEKNRKAREAAELARAASAEIPF----HRLCVSNIHFNLT 382
Query: 341 EDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIAGRTIKV 400
+++++ +F FG +E V + D+ KGFG+IQ+ ARNAL ++AGR ++V
Sbjct: 383 DEDVKAIFEPFGDIEFVHLQRDDQNRSKGFGYIQYRNPISARNALEKMNGFDLAGRNMRV 442
Query: 401 STVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSLGTHVVN 460
D+ + + DE +R Q R G +S+
Sbjct: 443 CLGNDKFTTETTSSMLKRFDE---------TLARQERSQPSQRNGGSSTYESQDYREAAP 502
Query: 461 NTGATVPVAPILGGATISSLGVGTSLAAFPAFPALGAGVQVPPVTANLLGVGTPSECLLL 520
+ PI + L ++ PP+ S C LL
Sbjct: 503 LSPTEEESRPITRDELMKKLARSEDISDNSKL----VSEPEPPIR---------SRCALL 562
Query: 521 KNMFDPTAESEPTFDLDIRDDVEEEC-SRFGKLKHIYVDKNSAGFVYLRFEKSESALEAQ 580
+NMF+P E+ P + ++ DV+EEC ++GK+ HI V N G ++++FE ++ A +A
Sbjct: 563 ENMFNPAEETSPNWVQELEQDVKEECDEKYGKVVHIAVVPNELGQIFVKFENADFAEKAI 601
Query: 581 RALNGRWFAGKMIGATFMDIPIYEAKFPDSR 605
L+ RWF G+ I A+ + Y KFP+++
Sbjct: 623 TGLHQRWFGGRTIKASILPETDYYFKFPNAK 601
BLAST of PI0022518 vs. ExPASy Swiss-Prot
Match:
Q86U06 (Probable RNA-binding protein 23 OS=Homo sapiens OX=9606 GN=RBM23 PE=1 SV=1)
HSP 1 Score: 110.2 bits (274), Expect = 8.5e-23
Identity = 130/404 (32.18%), Postives = 191/404 (47.28%), Query Frame = 0
Query: 91 GIEAVRKIGKRGQRRESGREKQERSRRSRSRS---ERHRSDRDDG--IRERSRDNELRER 150
G + + K+ + R + + + RSR R R+ R G R RSR + R
Sbjct: 51 GSSTIGETSKKKRSRSHNKSRDRKRSRSRDRDRYRRRNSRSRSPGRQCRHRSRSWD-RRH 110
Query: 151 EKERESRERGRDGRYFYKLLTCSVLMQLGSLLLHQFHLMTLLRYKDKKDETAEPEADPER 210
E SR+ R+ R Y+ + + G F R K E + + ER
Sbjct: 111 GSESRSRDHRREDRVHYRSPPLATGYRYGHSKSPHF------REKSPVREPVDNLSPEER 170
Query: 211 DQRTVFAYQFKG--TERDVYEFFSRAGKVCMLVKLQSAVLGAIGEKHQIKRRSRVLHSME 270
D RTVF Q RD+ +FFS GKV V++ S R SR +
Sbjct: 171 DARTVFCMQLAARIRPRDLEDFFSAVGKV-RDVRIIS------------DRNSRRSKGIA 230
Query: 271 YVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARR 330
YVEF + SVP+AI L+GQ LL P++V+ S+AEKN++ + + G +GG R
Sbjct: 231 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKG------NGGPMR 290
Query: 331 LYVGNLHPNITEDNLRQVFGAFGTVE-LVQMPLDESGHCKGFGFIQFTRLEDARNALSLN 390
LYVG+LH NITED LR +F FG ++ +V M ++G KG+GFI F+ E AR AL
Sbjct: 291 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 350
Query: 391 GQLEIAGRTIKVSTVTDQ-PGLQDVGASTGDLDEE---DGGGLSLNASSRASLMQKLDRT 450
E+AGR ++V VT++ G D+ GD + + GG L A +L T
Sbjct: 351 NGFELAGRPMRVGHVTERLDGGTDITFPDGDQELDLGSAGGRFQLMAKLAEGAGIQLPST 410
Query: 451 GAASSIAGSLGTHVVNNTGATVPVAPILGGATISSLGVGTSLAA 483
AA++ A + + N VP+ L A +++L +LA+
Sbjct: 411 AAAAAAAAAQAAALQLN--GAVPLG-ALNPAALTALSPALNLAS 425
BLAST of PI0022518 vs. ExPASy TrEMBL
Match:
A0A0A0K4Q5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014530 PE=4 SV=1)
HSP 1 Score: 851.3 bits (2198), Expect = 2.5e-243
Identity = 488/636 (76.73%), Postives = 506/636 (79.56%), Query Frame = 0
Query: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGDIGQ--- 60
MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDG+
Sbjct: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGEHRSKHL 60
Query: 61 ----------------SVRNRMMNHVTEIGIEIGLLPGIG-----------LGPERGIVI 120
S R+R + + G +R +
Sbjct: 61 KSDDESRDRDRHRDRTSSRHRSRSRERDRDRHRSSKENRGKEDREGNREERSSKDRDVDR 120
Query: 121 GIEAVRKIGKRGQRRESGREKQERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE 180
E +RG+ E RE+ E+SRRSRSRSERHRSDRDDGIRERSRDNELREREKERE
Sbjct: 121 DKERSHDRDRRGRDGERNRER-EQSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE 180
Query: 181 SRERGRDGRYFYKLLTCSVLMQLGSLLLHQFHLMTLLRYKDKKDETAEPEADPERDQRTV 240
SRERGRDGR RYKDKKDETAEPEADPERDQRTV
Sbjct: 181 SRERGRDGR----------------------------RYKDKKDETAEPEADPERDQRTV 240
Query: 241 FAYQ--FKGTERDVYEFFSRAGKVCMLVKLQSAVLGAIGEKHQIKRRSRVLHSMEYVEFV 300
FAYQ K TERDVYEFFSRAGKV + + + R SR + YVEFV
Sbjct: 241 FAYQISLKATERDVYEFFSRAGKVRDVRLI-------------MDRNSRRSKGVGYVEFV 300
Query: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN 360
DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN
Sbjct: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN 360
Query: 361 LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA 420
LHPNITEDNLRQVFGAFGTVELVQMP+DESGHCKGFGFIQFTRLEDARNALSLNGQLEIA
Sbjct: 361 LHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA 420
Query: 421 GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL
Sbjct: 421 GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
Query: 481 GTHVVNNTGATVPVAPILGGATISSLGVGTSLAAFPAFPALGAGVQVPPVTANLLGVGTP 540
GTHVVNNTGAT+P APILGGATI SL VGTSLAAFPAFP LGAGVQVPPVTANLLGVGTP
Sbjct: 481 GTHVVNNTGATMP-APILGGATIPSLSVGTSLAAFPAFPGLGAGVQVPPVTANLLGVGTP 540
Query: 541 SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKSES 600
SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVD+NSAGFVYLRFEKSES
Sbjct: 541 SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDRNSAGFVYLRFEKSES 593
Query: 601 ALEAQRALNGRWFAGKMIGATFMDIPIYEAKFPDSR 605
A+EAQRALNGRWFAGKMIGATFMDIP YEAKFPDSR
Sbjct: 601 AMEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 593
BLAST of PI0022518 vs. ExPASy TrEMBL
Match:
A0A1S3BIJ5 (RNA-binding protein 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490271 PE=4 SV=1)
HSP 1 Score: 847.8 bits (2189), Expect = 2.8e-242
Identity = 488/636 (76.73%), Postives = 503/636 (79.09%), Query Frame = 0
Query: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGDIGQ--- 60
MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKH+SRS KYKSDGKDDG+
Sbjct: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60
Query: 61 ----------------SVRNRMMNHVTEIGIEIGLLPGIG-----------LGPERGIVI 120
S R+R + + G +R +
Sbjct: 61 KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120
Query: 121 GIEAVRKIGKRGQRRESGREKQERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE 180
E +RG+ E RE+ ERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE
Sbjct: 121 DKERSHDRDRRGRDGERNRER-ERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE 180
Query: 181 SRERGRDGRYFYKLLTCSVLMQLGSLLLHQFHLMTLLRYKDKKDETAEPEADPERDQRTV 240
SRERGRDGR RYKDKKDE AEPEADPERDQRTV
Sbjct: 181 SRERGRDGR----------------------------RYKDKKDEAAEPEADPERDQRTV 240
Query: 241 FAYQ--FKGTERDVYEFFSRAGKVCMLVKLQSAVLGAIGEKHQIKRRSRVLHSMEYVEFV 300
FAYQ K TERDVYEFFSRAGKV + + + R SR + YVEFV
Sbjct: 241 FAYQISLKATERDVYEFFSRAGKVRDVRLI-------------MDRNSRRSKGVGYVEFV 300
Query: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN 360
DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN
Sbjct: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN 360
Query: 361 LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA 420
LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA
Sbjct: 361 LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA 420
Query: 421 GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL
Sbjct: 421 GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
Query: 481 GTHVVNNTGATVPVAPILGGATISSLGVGTSLAAFPAFPALGAGVQVPPVTANLLGVGTP 540
GTHVVNNTGAT+P APILGGATI SLGVGTSLAAFPAFP LGAGVQVPPVTANLLGVGTP
Sbjct: 481 GTHVVNNTGATMP-APILGGATIPSLGVGTSLAAFPAFPGLGAGVQVPPVTANLLGVGTP 540
Query: 541 SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKSES 600
SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEK ES
Sbjct: 541 SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKPES 593
Query: 601 ALEAQRALNGRWFAGKMIGATFMDIPIYEAKFPDSR 605
A EAQRALNGRWFAGKMIGATFMDIP YEAKFPDSR
Sbjct: 601 ATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 593
BLAST of PI0022518 vs. ExPASy TrEMBL
Match:
A0A1S3BJ70 (RNA-binding protein 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490271 PE=4 SV=1)
HSP 1 Score: 845.9 bits (2184), Expect = 1.0e-241
Identity = 487/636 (76.57%), Postives = 502/636 (78.93%), Query Frame = 0
Query: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGDIGQ--- 60
MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKH+SRS KYKSDGKDDG+
Sbjct: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60
Query: 61 ----------------SVRNRMMNHVTEIGIEIGLLPGIG-----------LGPERGIVI 120
S R+R + + G +R +
Sbjct: 61 KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120
Query: 121 GIEAVRKIGKRGQRRESGREKQERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE 180
E +RG+ E RE+ ERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE
Sbjct: 121 DKERSHDRDRRGRDGERNRER-ERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE 180
Query: 181 SRERGRDGRYFYKLLTCSVLMQLGSLLLHQFHLMTLLRYKDKKDETAEPEADPERDQRTV 240
SRERGRDG RYKDKKDE AEPEADPERDQRTV
Sbjct: 181 SRERGRDG-----------------------------RYKDKKDEAAEPEADPERDQRTV 240
Query: 241 FAYQ--FKGTERDVYEFFSRAGKVCMLVKLQSAVLGAIGEKHQIKRRSRVLHSMEYVEFV 300
FAYQ K TERDVYEFFSRAGKV + + + R SR + YVEFV
Sbjct: 241 FAYQISLKATERDVYEFFSRAGKVRDVRLI-------------MDRNSRRSKGVGYVEFV 300
Query: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN 360
DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN
Sbjct: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN 360
Query: 361 LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA 420
LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA
Sbjct: 361 LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA 420
Query: 421 GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL
Sbjct: 421 GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
Query: 481 GTHVVNNTGATVPVAPILGGATISSLGVGTSLAAFPAFPALGAGVQVPPVTANLLGVGTP 540
GTHVVNNTGAT+P APILGGATI SLGVGTSLAAFPAFP LGAGVQVPPVTANLLGVGTP
Sbjct: 481 GTHVVNNTGATMP-APILGGATIPSLGVGTSLAAFPAFPGLGAGVQVPPVTANLLGVGTP 540
Query: 541 SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKSES 600
SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEK ES
Sbjct: 541 SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKPES 592
Query: 601 ALEAQRALNGRWFAGKMIGATFMDIPIYEAKFPDSR 605
A EAQRALNGRWFAGKMIGATFMDIP YEAKFPDSR
Sbjct: 601 ATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 592
BLAST of PI0022518 vs. ExPASy TrEMBL
Match:
A0A6J1HYU3 (RNA-binding protein 39 OS=Cucurbita maxima OX=3661 GN=LOC111468152 PE=4 SV=1)
HSP 1 Score: 780.0 bits (2013), Expect = 7.1e-222
Identity = 450/637 (70.64%), Postives = 484/637 (75.98%), Query Frame = 0
Query: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGDIGQ--- 60
MDFDEYDYLEKTVENPEGQKVKETANGGD EMKSGDKH SRSSKYK+DGKDDG+
Sbjct: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHRSRSSKYKTDGKDDGEHRSKRS 60
Query: 61 ----------------SVRNRMMNHVTEIGIEIGLLPGIG-----------LGPERGIVI 120
S R+R + + G +R +
Sbjct: 61 KSEDESLDHDRHRDRTSSRHRSRSRDRDRDRHSSGKEFRGKEDREKNQEERSSKDRDVDR 120
Query: 121 GIEAVRKIGKRGQRRESGREKQERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE 180
E V +RG+ E RE+ ERS RSRS SERHRSDRD+ +R+R+RDNE REREKERE
Sbjct: 121 DKERVHDHDRRGRDGEKDRER-ERSHRSRSHSERHRSDRDESMRQRTRDNEFREREKERE 180
Query: 181 SRERGRDGRYFYKLLTCSVLMQLGSLLLHQFHLMTLLRYKDKKDETAEPEADPERDQRTV 240
SRERGRDGR R+K+KK++ EPEADPERDQRTV
Sbjct: 181 SRERGRDGR----------------------------RHKEKKEDGTEPEADPERDQRTV 240
Query: 241 FAYQ--FKGTERDVYEFFSRAGKVCMLVKLQSAVLGAIGEKHQIKRRSRVLHSMEYVEFV 300
FAYQ K TERDV+EFFSRAGKV + + + R SR + YVEFV
Sbjct: 241 FAYQISLKATERDVFEFFSRAGKVRDVRLI-------------MDRNSRRSKGVGYVEFV 300
Query: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN 360
DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQ QSTSAA GPGG MGPY+GGARRLYVGN
Sbjct: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQAQSTSAAAGPGGVMGPYTGGARRLYVGN 360
Query: 361 LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA 420
LHPNITEDNLRQVFGAFG VELVQMPLDESGHCKGFGFIQF+RLEDARNALSLNGQLEIA
Sbjct: 361 LHPNITEDNLRQVFGAFGIVELVQMPLDESGHCKGFGFIQFSRLEDARNALSLNGQLEIA 420
Query: 421 GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
GR IKVSTVTDQPGLQD+GASTGDLD+EDG GLSLNASSRASLMQKLDRTG ASSIAGSL
Sbjct: 421 GRMIKVSTVTDQPGLQDIGASTGDLDDEDGVGLSLNASSRASLMQKLDRTGTASSIAGSL 480
Query: 481 GTHVVNNTGATVPVAPILGGATISSLGVGTSLAAFPAFPALG-AGVQVPPVTANLLGVGT 540
GTHVVNNTGAT+P+APILG TI SLGV TSL + PAFP LG AGVQVP V ANLLGVGT
Sbjct: 481 GTHVVNNTGATMPMAPILGVGTIPSLGVATSLVSVPAFPGLGAAGVQVPTVAANLLGVGT 540
Query: 541 PSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKSE 600
PSECLLLKNMFDPTAE EPTFD+DIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRF SE
Sbjct: 541 PSECLLLKNMFDPTAELEPTFDMDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFANSE 595
Query: 601 SALEAQRALNGRWFAGKMIGATFMDIPIYEAKFPDSR 605
+A++AQRALNGRWFAGKMIGATFMDIP YEAKFPDSR
Sbjct: 601 AAMDAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 595
BLAST of PI0022518 vs. ExPASy TrEMBL
Match:
A0A6J1GM48 (RNA-binding protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111455622 PE=4 SV=1)
HSP 1 Score: 778.1 bits (2008), Expect = 2.7e-221
Identity = 450/637 (70.64%), Postives = 483/637 (75.82%), Query Frame = 0
Query: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGDIGQ--- 60
MDFDEYDYLEKTVENPEGQKVKETANGGD EMKSGDKH SRSSKYK+DGKDDG+
Sbjct: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHRSRSSKYKTDGKDDGEHRSKRS 60
Query: 61 ----------------SVRNRMMNHVTEIGIEIGLLPGIG-----------LGPERGIVI 120
S R+R + + G +R +
Sbjct: 61 KSEDESLDHDRHRDRTSSRHRSRSRDRDRDRHSSGKEFRGKEDREKNQEERSSKDRDVDR 120
Query: 121 GIEAVRKIGKRGQRRESGREKQERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE 180
E V +RG+ E RE+ ERS RSRS SERHRSDRD+ IR+R+RDNE REREKERE
Sbjct: 121 DKERVHDHDRRGRDGEKDRER-ERSHRSRSHSERHRSDRDESIRQRTRDNEFREREKERE 180
Query: 181 SRERGRDGRYFYKLLTCSVLMQLGSLLLHQFHLMTLLRYKDKKDETAEPEADPERDQRTV 240
SRERGRDGR R+K+KK++ EPEADPERDQRTV
Sbjct: 181 SRERGRDGR----------------------------RHKEKKEDGTEPEADPERDQRTV 240
Query: 241 FAYQ--FKGTERDVYEFFSRAGKVCMLVKLQSAVLGAIGEKHQIKRRSRVLHSMEYVEFV 300
FAYQ K TERDV+EFFSRAGKV + + + R SR + YVEFV
Sbjct: 241 FAYQISLKATERDVFEFFSRAGKVRDVRLI-------------MDRNSRRSKGVGYVEFV 300
Query: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN 360
DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQ QSTSAA GPGG MGPY+GGARRLYVGN
Sbjct: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQAQSTSAAAGPGGVMGPYTGGARRLYVGN 360
Query: 361 LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA 420
LHPNITEDNLRQVFGAFG VELVQMPLDESGHCKGFGFIQF+RLEDARNALSLNGQLEIA
Sbjct: 361 LHPNITEDNLRQVFGAFGIVELVQMPLDESGHCKGFGFIQFSRLEDARNALSLNGQLEIA 420
Query: 421 GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
GR IKVSTVTDQPGLQD+GASTGDLD+EDG GLSLNASSRASLMQKLDRTG ASSIAGSL
Sbjct: 421 GRMIKVSTVTDQPGLQDIGASTGDLDDEDGVGLSLNASSRASLMQKLDRTGTASSIAGSL 480
Query: 481 GTHVVNNTGATVPVAPILGGATISSLGVGTSLAAFPAFPALG-AGVQVPPVTANLLGVGT 540
GTHVVNNTGAT+ +APILG TI SLGV TSL + PAFP LG AGVQVP V ANLLGVGT
Sbjct: 481 GTHVVNNTGATMAMAPILGVGTIPSLGVATSLVSVPAFPGLGAAGVQVPTVAANLLGVGT 540
Query: 541 PSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKSE 600
PSECLLLKNMFDPTAE EPTFD+DIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRF SE
Sbjct: 541 PSECLLLKNMFDPTAELEPTFDMDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFANSE 595
Query: 601 SALEAQRALNGRWFAGKMIGATFMDIPIYEAKFPDSR 605
+A++AQRALNGRWFAGKMIGATFMDIP YEAKFPDSR
Sbjct: 601 AAMDAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 595
BLAST of PI0022518 vs. NCBI nr
Match:
XP_011658601.1 (RNA-binding protein 39 isoform X1 [Cucumis sativus] >XP_031744308.1 RNA-binding protein 39 isoform X1 [Cucumis sativus] >XP_031744309.1 RNA-binding protein 39 isoform X1 [Cucumis sativus] >KGN43267.1 hypothetical protein Csa_020331 [Cucumis sativus])
HSP 1 Score: 851.3 bits (2198), Expect = 5.2e-243
Identity = 488/636 (76.73%), Postives = 506/636 (79.56%), Query Frame = 0
Query: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGDIGQ--- 60
MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDG+
Sbjct: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGEHRSKHL 60
Query: 61 ----------------SVRNRMMNHVTEIGIEIGLLPGIG-----------LGPERGIVI 120
S R+R + + G +R +
Sbjct: 61 KSDDESRDRDRHRDRTSSRHRSRSRERDRDRHRSSKENRGKEDREGNREERSSKDRDVDR 120
Query: 121 GIEAVRKIGKRGQRRESGREKQERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE 180
E +RG+ E RE+ E+SRRSRSRSERHRSDRDDGIRERSRDNELREREKERE
Sbjct: 121 DKERSHDRDRRGRDGERNRER-EQSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE 180
Query: 181 SRERGRDGRYFYKLLTCSVLMQLGSLLLHQFHLMTLLRYKDKKDETAEPEADPERDQRTV 240
SRERGRDGR RYKDKKDETAEPEADPERDQRTV
Sbjct: 181 SRERGRDGR----------------------------RYKDKKDETAEPEADPERDQRTV 240
Query: 241 FAYQ--FKGTERDVYEFFSRAGKVCMLVKLQSAVLGAIGEKHQIKRRSRVLHSMEYVEFV 300
FAYQ K TERDVYEFFSRAGKV + + + R SR + YVEFV
Sbjct: 241 FAYQISLKATERDVYEFFSRAGKVRDVRLI-------------MDRNSRRSKGVGYVEFV 300
Query: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN 360
DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN
Sbjct: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN 360
Query: 361 LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA 420
LHPNITEDNLRQVFGAFGTVELVQMP+DESGHCKGFGFIQFTRLEDARNALSLNGQLEIA
Sbjct: 361 LHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA 420
Query: 421 GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL
Sbjct: 421 GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
Query: 481 GTHVVNNTGATVPVAPILGGATISSLGVGTSLAAFPAFPALGAGVQVPPVTANLLGVGTP 540
GTHVVNNTGAT+P APILGGATI SL VGTSLAAFPAFP LGAGVQVPPVTANLLGVGTP
Sbjct: 481 GTHVVNNTGATMP-APILGGATIPSLSVGTSLAAFPAFPGLGAGVQVPPVTANLLGVGTP 540
Query: 541 SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKSES 600
SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVD+NSAGFVYLRFEKSES
Sbjct: 541 SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDRNSAGFVYLRFEKSES 593
Query: 601 ALEAQRALNGRWFAGKMIGATFMDIPIYEAKFPDSR 605
A+EAQRALNGRWFAGKMIGATFMDIP YEAKFPDSR
Sbjct: 601 AMEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 593
BLAST of PI0022518 vs. NCBI nr
Match:
XP_011658603.1 (RNA-binding protein 39 isoform X2 [Cucumis sativus])
HSP 1 Score: 849.4 bits (2193), Expect = 2.0e-242
Identity = 487/636 (76.57%), Postives = 505/636 (79.40%), Query Frame = 0
Query: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGDIGQ--- 60
MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDG+
Sbjct: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGEHRSKHL 60
Query: 61 ----------------SVRNRMMNHVTEIGIEIGLLPGIG-----------LGPERGIVI 120
S R+R + + G +R +
Sbjct: 61 KSDDESRDRDRHRDRTSSRHRSRSRERDRDRHRSSKENRGKEDREGNREERSSKDRDVDR 120
Query: 121 GIEAVRKIGKRGQRRESGREKQERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE 180
E +RG+ E RE+ E+SRRSRSRSERHRSDRDDGIRERSRDNELREREKERE
Sbjct: 121 DKERSHDRDRRGRDGERNRER-EQSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE 180
Query: 181 SRERGRDGRYFYKLLTCSVLMQLGSLLLHQFHLMTLLRYKDKKDETAEPEADPERDQRTV 240
SRERGRDG RYKDKKDETAEPEADPERDQRTV
Sbjct: 181 SRERGRDG-----------------------------RYKDKKDETAEPEADPERDQRTV 240
Query: 241 FAYQ--FKGTERDVYEFFSRAGKVCMLVKLQSAVLGAIGEKHQIKRRSRVLHSMEYVEFV 300
FAYQ K TERDVYEFFSRAGKV + + + R SR + YVEFV
Sbjct: 241 FAYQISLKATERDVYEFFSRAGKVRDVRLI-------------MDRNSRRSKGVGYVEFV 300
Query: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN 360
DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN
Sbjct: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN 360
Query: 361 LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA 420
LHPNITEDNLRQVFGAFGTVELVQMP+DESGHCKGFGFIQFTRLEDARNALSLNGQLEIA
Sbjct: 361 LHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA 420
Query: 421 GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL
Sbjct: 421 GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
Query: 481 GTHVVNNTGATVPVAPILGGATISSLGVGTSLAAFPAFPALGAGVQVPPVTANLLGVGTP 540
GTHVVNNTGAT+P APILGGATI SL VGTSLAAFPAFP LGAGVQVPPVTANLLGVGTP
Sbjct: 481 GTHVVNNTGATMP-APILGGATIPSLSVGTSLAAFPAFPGLGAGVQVPPVTANLLGVGTP 540
Query: 541 SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKSES 600
SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVD+NSAGFVYLRFEKSES
Sbjct: 541 SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDRNSAGFVYLRFEKSES 592
Query: 601 ALEAQRALNGRWFAGKMIGATFMDIPIYEAKFPDSR 605
A+EAQRALNGRWFAGKMIGATFMDIP YEAKFPDSR
Sbjct: 601 AMEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 592
BLAST of PI0022518 vs. NCBI nr
Match:
XP_008447936.1 (PREDICTED: RNA-binding protein 39 isoform X1 [Cucumis melo] >XP_016900486.1 PREDICTED: RNA-binding protein 39 isoform X1 [Cucumis melo])
HSP 1 Score: 847.8 bits (2189), Expect = 5.7e-242
Identity = 488/636 (76.73%), Postives = 503/636 (79.09%), Query Frame = 0
Query: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGDIGQ--- 60
MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKH+SRS KYKSDGKDDG+
Sbjct: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60
Query: 61 ----------------SVRNRMMNHVTEIGIEIGLLPGIG-----------LGPERGIVI 120
S R+R + + G +R +
Sbjct: 61 KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120
Query: 121 GIEAVRKIGKRGQRRESGREKQERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE 180
E +RG+ E RE+ ERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE
Sbjct: 121 DKERSHDRDRRGRDGERNRER-ERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE 180
Query: 181 SRERGRDGRYFYKLLTCSVLMQLGSLLLHQFHLMTLLRYKDKKDETAEPEADPERDQRTV 240
SRERGRDGR RYKDKKDE AEPEADPERDQRTV
Sbjct: 181 SRERGRDGR----------------------------RYKDKKDEAAEPEADPERDQRTV 240
Query: 241 FAYQ--FKGTERDVYEFFSRAGKVCMLVKLQSAVLGAIGEKHQIKRRSRVLHSMEYVEFV 300
FAYQ K TERDVYEFFSRAGKV + + + R SR + YVEFV
Sbjct: 241 FAYQISLKATERDVYEFFSRAGKVRDVRLI-------------MDRNSRRSKGVGYVEFV 300
Query: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN 360
DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN
Sbjct: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN 360
Query: 361 LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA 420
LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA
Sbjct: 361 LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA 420
Query: 421 GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL
Sbjct: 421 GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
Query: 481 GTHVVNNTGATVPVAPILGGATISSLGVGTSLAAFPAFPALGAGVQVPPVTANLLGVGTP 540
GTHVVNNTGAT+P APILGGATI SLGVGTSLAAFPAFP LGAGVQVPPVTANLLGVGTP
Sbjct: 481 GTHVVNNTGATMP-APILGGATIPSLGVGTSLAAFPAFPGLGAGVQVPPVTANLLGVGTP 540
Query: 541 SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKSES 600
SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEK ES
Sbjct: 541 SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKPES 593
Query: 601 ALEAQRALNGRWFAGKMIGATFMDIPIYEAKFPDSR 605
A EAQRALNGRWFAGKMIGATFMDIP YEAKFPDSR
Sbjct: 601 ATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 593
BLAST of PI0022518 vs. NCBI nr
Match:
XP_008447937.1 (PREDICTED: RNA-binding protein 39 isoform X2 [Cucumis melo])
HSP 1 Score: 845.9 bits (2184), Expect = 2.2e-241
Identity = 487/636 (76.57%), Postives = 502/636 (78.93%), Query Frame = 0
Query: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGDIGQ--- 60
MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKH+SRS KYKSDGKDDG+
Sbjct: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60
Query: 61 ----------------SVRNRMMNHVTEIGIEIGLLPGIG-----------LGPERGIVI 120
S R+R + + G +R +
Sbjct: 61 KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120
Query: 121 GIEAVRKIGKRGQRRESGREKQERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE 180
E +RG+ E RE+ ERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE
Sbjct: 121 DKERSHDRDRRGRDGERNRER-ERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE 180
Query: 181 SRERGRDGRYFYKLLTCSVLMQLGSLLLHQFHLMTLLRYKDKKDETAEPEADPERDQRTV 240
SRERGRDG RYKDKKDE AEPEADPERDQRTV
Sbjct: 181 SRERGRDG-----------------------------RYKDKKDEAAEPEADPERDQRTV 240
Query: 241 FAYQ--FKGTERDVYEFFSRAGKVCMLVKLQSAVLGAIGEKHQIKRRSRVLHSMEYVEFV 300
FAYQ K TERDVYEFFSRAGKV + + + R SR + YVEFV
Sbjct: 241 FAYQISLKATERDVYEFFSRAGKVRDVRLI-------------MDRNSRRSKGVGYVEFV 300
Query: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN 360
DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN
Sbjct: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN 360
Query: 361 LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA 420
LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA
Sbjct: 361 LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA 420
Query: 421 GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL
Sbjct: 421 GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
Query: 481 GTHVVNNTGATVPVAPILGGATISSLGVGTSLAAFPAFPALGAGVQVPPVTANLLGVGTP 540
GTHVVNNTGAT+P APILGGATI SLGVGTSLAAFPAFP LGAGVQVPPVTANLLGVGTP
Sbjct: 481 GTHVVNNTGATMP-APILGGATIPSLGVGTSLAAFPAFPGLGAGVQVPPVTANLLGVGTP 540
Query: 541 SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKSES 600
SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEK ES
Sbjct: 541 SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKPES 592
Query: 601 ALEAQRALNGRWFAGKMIGATFMDIPIYEAKFPDSR 605
A EAQRALNGRWFAGKMIGATFMDIP YEAKFPDSR
Sbjct: 601 ATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 592
BLAST of PI0022518 vs. NCBI nr
Match:
XP_038887515.1 (RNA-binding protein 39-like isoform X2 [Benincasa hispida])
HSP 1 Score: 825.1 bits (2130), Expect = 4.0e-235
Identity = 473/636 (74.37%), Postives = 498/636 (78.30%), Query Frame = 0
Query: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGD------ 60
MDFDEYDYLEKTVENPEGQKVKETANGGD +MKSGDKH SRSSKYKSD KDDG+
Sbjct: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDADMKSGDKHRSRSSKYKSDSKDDGEHRSKRS 60
Query: 61 -------------------IGQSVRNRMMNHVTEIGIEIGLLPGIGLGPERG-----IVI 120
G+ R+R + G E G ER +
Sbjct: 61 KSEDESRDQDRHRDRHRSRFGERDRDRHRSSKENRGKE----DREGNHEERSSRDRDVDR 120
Query: 121 GIEAVRKIGKRGQRRESGREKQERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERE 180
E +RG+ E RE+ ERSRRSRSRSERHRSDRD+GIRERSRDNELRERE+ERE
Sbjct: 121 DKERSHDRDRRGRDGERNRER-ERSRRSRSRSERHRSDRDEGIRERSRDNELRERERERE 180
Query: 181 SRERGRDGRYFYKLLTCSVLMQLGSLLLHQFHLMTLLRYKDKKDETAEPEADPERDQRTV 240
SRERGRDGR RYKDKK+E AEPEADPERDQRTV
Sbjct: 181 SRERGRDGR----------------------------RYKDKKEEAAEPEADPERDQRTV 240
Query: 241 FAYQ--FKGTERDVYEFFSRAGKVCMLVKLQSAVLGAIGEKHQIKRRSRVLHSMEYVEFV 300
FAYQ K TERDVYEFFSRAGKV + + + R SR + YVEFV
Sbjct: 241 FAYQISLKATERDVYEFFSRAGKVRDVRLI-------------MDRNSRRSKGVGYVEFV 300
Query: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGN 360
DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQST+AAGGPGG MGPYSGGARRLYVGN
Sbjct: 301 DAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTAAAGGPGGVMGPYSGGARRLYVGN 360
Query: 361 LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIA 420
LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQF+RLEDARNALSLNGQLEIA
Sbjct: 361 LHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFSRLEDARNALSLNGQLEIA 420
Query: 421 GRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSL 480
GRTIKVSTVTDQPGLQD+GA+TGDLD+EDGGGLSLNASSRASLMQKLDRT AASSIAGSL
Sbjct: 421 GRTIKVSTVTDQPGLQDIGANTGDLDDEDGGGLSLNASSRASLMQKLDRTRAASSIAGSL 480
Query: 481 GTHVVNNTGATVPVAPILGGATISSLGVGTSLAAFPAFPALGAGVQVPPVTANLLGVGTP 540
GTHVVNNTGA +P+APILGGATI SL VGTSLAAFPAFP LGAGV VP V A+LLGVGTP
Sbjct: 481 GTHVVNNTGAAMPMAPILGGATIPSLAVGTSLAAFPAFPGLGAGVHVPAVAASLLGVGTP 540
Query: 541 SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKSES 600
SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKSES
Sbjct: 541 SECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKSES 590
Query: 601 ALEAQRALNGRWFAGKMIGATFMDIPIYEAKFPDSR 605
A+EAQRALNGRWFAGKMIGATFMDIP YE KFPDSR
Sbjct: 601 AMEAQRALNGRWFAGKMIGATFMDIPSYEVKFPDSR 590
BLAST of PI0022518 vs. TAIR 10
Match:
AT2G16940.3 (Splicing factor, CC1-like )
HSP 1 Score: 530.8 bits (1366), Expect = 1.4e-150
Identity = 346/626 (55.27%), Postives = 426/626 (68.05%), Query Frame = 0
Query: 1 MDFDEYDYLEKTVENPEGQKVKETAN-GGDGEMKSGDKHHSRSSKYKSDGK----DDGDI 60
MDFDEY+YLEKTVENP + E N GGD ++KS K SRSS+++ D K +D D
Sbjct: 1 MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDG 60
Query: 61 GQSVRNRMMNHVTEIGIEIGLLPGIGLGPERGIVIGIEAVRKIGK-----RGQRRES-GR 120
+S R+R + E +R ++ + GK R + R+S GR
Sbjct: 61 RRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEERNGKDRERDRDKDRDSKGR 120
Query: 121 E-KQERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERESRERGRDGRYFYKLLTCS 180
+ +++RSRRSRSRSERHRS + R+ L KERE+++R RD R+ LL
Sbjct: 121 DHEKDRSRRSRSRSERHRS--------QEREKSLEIEPKERETKDRDRDRRFILMLLGPL 180
Query: 181 VL--MQL-GSLLLHQFHLMTLLRYKDKKDETAEPEADPERDQRTVFAYQ--FKGTERDVY 240
VL +QL G+L F +R+KDKK++ EPEADPERDQRTVFAYQ + TERDVY
Sbjct: 181 VLPSVQLDGALPCRDF--SCFIRHKDKKEDKVEPEADPERDQRTVFAYQIALRATERDVY 240
Query: 241 EFFSRAGKVC-MLVKLQSAVLGAIGEKHQIKRRSRVLHSMEYVEFVDAMSVPMAIALSGQ 300
EFFSRAGKVC L + + I ++ I RRSR + YVEF D MSVPMAIALSGQ
Sbjct: 241 EFFSRAGKVCPFLCRFHVRDVRIIMDR--ISRRSR---GIGYVEFYDTMSVPMAIALSGQ 300
Query: 301 LLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGNLHPNITEDNLRQVF 360
LL QPVMVKPSEAEKN VQST+AA G GG +GPYSGGARRLYVGNLH N++ED+LR+VF
Sbjct: 301 PLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGARRLYVGNLHINMSEDDLRKVF 360
Query: 361 GAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPG 420
+FG+VELVQ+P DE+G CKGFGF+QF RLEDARNAL+LNGQLEIAGR IKVS VTDQ
Sbjct: 361 ESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRAIKVSAVTDQTE 420
Query: 421 LQDVG--ASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSLGTHVVNNTGATV 480
+ + G +TGDLD++DGGGLSLNA SRA LMQKLDR+G ASS TG T
Sbjct: 421 VPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGTASS------------TGLTT 480
Query: 481 PVAPILGGATISSLGVGTSL-AAFPAFPAL-GAGVQVPPVTANLLGVGTPSECLLLKNMF 540
+ G +TISSL + +FPA L G+G+ + A +G PSECLLLKNMF
Sbjct: 481 AASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFDPIGVPSECLLLKNMF 540
Query: 541 DPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKSESALEAQRALNG 600
DP+ E+E FD DI++DV+EECS+FGKL HI+VDKNS GFVYLRFE +++A+ AQRAL+G
Sbjct: 541 DPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHG 597
Query: 601 RWFAGKMIGATFMDIPIYEAKFPDSR 605
RWFAGKMI AT+M YEAKFP+S+
Sbjct: 601 RWFAGKMITATYMTTEAYEAKFPESK 597
BLAST of PI0022518 vs. TAIR 10
Match:
AT2G16940.2 (Splicing factor, CC1-like )
HSP 1 Score: 516.5 bits (1329), Expect = 2.8e-146
Identity = 339/643 (52.72%), Postives = 423/643 (65.79%), Query Frame = 0
Query: 1 MDFDEYDYLEKTVENPEGQKVKETAN-GGDGEMKSGDKHHSRSSKYKSDGK----DDGDI 60
MDFDEY+YLEKTVENP + E N GGD ++KS K SRSS+++ D K +D D
Sbjct: 1 MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDG 60
Query: 61 GQSVRNRMMNHVTEIGIEIGLLPGIGLGPERGIVIGIEAVRKIGK-----RGQRRES-GR 120
+S R+R + E +R ++ + GK R + R+S GR
Sbjct: 61 RRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEERNGKDRERDRDKDRDSKGR 120
Query: 121 E-KQERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERESRERGRDGRYFYKLLTCS 180
+ +++RSRRSRSRSERHRS + R+ L KERE+++R RD RY +L+
Sbjct: 121 DHEKDRSRRSRSRSERHRS--------QEREKSLEIEPKERETKDRDRDRRYTSELVIDF 180
Query: 181 VLMQLGSLLLHQ------FHLMTLL---------------RYKDKKDETAEPEADPERDQ 240
++ LL+ F ++ ++ R+KDKK++ EPEADPERDQ
Sbjct: 181 IIYVHWYCLLYNLMGHVPFKIIIVIEGTSRASCVYAYWRKRHKDKKEDKVEPEADPERDQ 240
Query: 241 RTVFAYQ--FKGTERDVYEFFSRAGKVCMLVKLQSAVLGAIGEKHQIKRRSRVLHSMEYV 300
RTVFAYQ + TERDVYEFFSRAGKV + + +I RRSR + YV
Sbjct: 241 RTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMD----------RISRRSR---GIGYV 300
Query: 301 EFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLY 360
EF D MSVPMAIALSGQ LL QPVMVKPSEAEKN VQST+AA G GG +GPYSGGARRLY
Sbjct: 301 EFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGARRLY 360
Query: 361 VGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQL 420
VGNLH N++ED+LR+VF +FG+VELVQ+P DE+G CKGFGF+QF RLEDARNAL+LNGQL
Sbjct: 361 VGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLNGQL 420
Query: 421 EIAGRTIKVSTVTDQPGLQDVG--ASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASS 480
EIAGR IKVS VTDQ + + G +TGDLD++DGGGLSLNA SRA LMQKLDR+G ASS
Sbjct: 421 EIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGTASS 480
Query: 481 IAGSLGTHVVNNTGATVPVAPILGGATISSLGVGTSL-AAFPAFPAL-GAGVQVPPVTAN 540
TG T + G +TISSL + +FPA L G+G+ + A
Sbjct: 481 ------------TGLTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAG 540
Query: 541 LLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYL 600
+G PSECLLLKNMFDP+ E+E FD DI++DV+EECS+FGKL HI+VDKNS GFVYL
Sbjct: 541 FDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYL 600
Query: 601 RFEKSESALEAQRALNGRWFAGKMIGATFMDIPIYEAKFPDSR 605
RFE +++A+ AQRAL+GRWFAGKMI AT+M YEAKFP+S+
Sbjct: 601 RFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPESK 608
BLAST of PI0022518 vs. TAIR 10
Match:
AT2G16940.1 (Splicing factor, CC1-like )
HSP 1 Score: 512.7 bits (1319), Expect = 4.1e-145
Identity = 334/622 (53.70%), Postives = 409/622 (65.76%), Query Frame = 0
Query: 1 MDFDEYDYLEKTVENPEGQKVKETAN-GGDGEMKSGDKHHSRSSKYKSDGK----DDGDI 60
MDFDEY+YLEKTVENP + E N GGD ++KS K SRSS+++ D K +D D
Sbjct: 1 MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDEDG 60
Query: 61 GQSVRNRMMNHVTEIGIEIGLLPGIGLGPERGIVIGIEAVRKIGK-----RGQRRES-GR 120
+S R+R + E +R ++ + GK R + R+S GR
Sbjct: 61 RRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEERNGKDRERDRDKDRDSKGR 120
Query: 121 E-KQERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERESRERGRDGRYFYKLLTCS 180
+ +++RSRRSRSRSERHRS + R+ L KERE+++R RD R
Sbjct: 121 DHEKDRSRRSRSRSERHRS--------QEREKSLEIEPKERETKDRDRDRR--------- 180
Query: 181 VLMQLGSLLLHQFHLMTLLRYKDKKDETAEPEADPERDQRTVFAYQ--FKGTERDVYEFF 240
R+KDKK++ EPEADPERDQRTVFAYQ + TERDVYEFF
Sbjct: 181 -------------------RHKDKKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFF 240
Query: 241 SRAGKVCMLVKLQSAVLGAIGEKHQIKRRSRVLHSMEYVEFVDAMSVPMAIALSGQLLLS 300
SRAGKV + + +I RRSR + YVEF D MSVPMAIALSGQ LL
Sbjct: 241 SRAGKVRDVRIIMD----------RISRRSR---GIGYVEFYDTMSVPMAIALSGQPLLG 300
Query: 301 QPVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFG 360
QPVMVKPSEAEKN VQST+AA G GG +GPYSGGARRLYVGNLH N++ED+LR+VF +FG
Sbjct: 301 QPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGARRLYVGNLHINMSEDDLRKVFESFG 360
Query: 361 TVELVQMPLDESGHCKGFGFIQFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDV 420
+VELVQ+P DE+G CKGFGF+QF RLEDARNAL+LNGQLEIAGR IKVS VTDQ + +
Sbjct: 361 SVELVQVPRDETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRAIKVSAVTDQTEVPEA 420
Query: 421 G--ASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSLGTHVVNNTGATVPVAP 480
G +TGDLD++DGGGLSLNA SRA LMQKLDR+G ASS TG T +
Sbjct: 421 GQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGTASS------------TGLTTAASF 480
Query: 481 ILGGATISSLGVGTSL-AAFPAFPAL-GAGVQVPPVTANLLGVGTPSECLLLKNMFDPTA 540
G +TISSL + +FPA L G+G+ + A +G PSECLLLKNMFDP+
Sbjct: 481 NGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFDPIGVPSECLLLKNMFDPST 540
Query: 541 ESEPTFDLDIRDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKSESALEAQRALNGRWFA 600
E+E FD DI++DV+EECS+FGKL HI+VDKNS GFVYLRFE +++A+ AQRAL+GRWFA
Sbjct: 541 ETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFA 559
Query: 601 GKMIGATFMDIPIYEAKFPDSR 605
GKMI AT+M YEAKFP+S+
Sbjct: 601 GKMITATYMTTEAYEAKFPESK 559
BLAST of PI0022518 vs. TAIR 10
Match:
AT5G09880.1 (Splicing factor, CC1-like )
HSP 1 Score: 418.7 bits (1075), Expect = 8.0e-117
Identity = 292/607 (48.11%), Postives = 360/607 (59.31%), Query Frame = 0
Query: 1 MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGDIGQSVR 60
M+FDEY+YLEKTVE G K+ +G + +S K + + G+++ +S +
Sbjct: 1 MEFDEYEYLEKTVEEGAGSNKKKEESGNERSERSYRKREGGERQGEEGGEEERVSSRSKK 60
Query: 61 NRMMNHVTEIGIEIGLLPGIGLGPERGIVIGIEAVRKIGKRGQRRESGREK---QERSRR 120
+R G G E G G + R+ + R+ RE+ +E SR
Sbjct: 61 SR------------------GDGEENG---GGKRDRERERHRSSRDKDRERDKVREGSRD 120
Query: 121 SRSRSERHRSDRDDGIRERSRDNELREREKERESRERGRDGRYFYKLLTCSVLMQLGSLL 180
S ER +RD R++ RD E REREK SR R + +++ GS
Sbjct: 121 KESDRERSSKERDRSDRDKPRDRERREREKRSSSRSRREEKE--------PEVVERGS-- 180
Query: 181 LHQFHLMTLLRYKDKKDETAEPEADPERDQRTVFAYQ--FKGTERDVYEFFSRAGKVCML 240
R++DKKD EPEADPERDQRTVFAYQ K TERDVYEFFS+AGKV +
Sbjct: 181 ---------RRHRDKKD---EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDV 240
Query: 241 VKLQSAVLGAIGEKHQIKRRSRVLHSMEYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSE 300
+ + R SR + Y+EF D MSVPMAIALSGQL L QPVMVKPSE
Sbjct: 241 RLI-------------MDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLFLGQPVMVKPSE 300
Query: 301 AEKNQVQSTS-AAGGPGGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMP 360
AEKN QS S GG G A R+LYVGNLH N++E LRQ+F AFG VELVQ+P
Sbjct: 301 AEKNLAQSNSTTVGGTGPA-------DRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLP 360
Query: 361 LD-ESGHCKGFGFIQFTRLEDARNA-LSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGD 420
LD E+G CKGFGFIQF +LE ++ A ++LNG+LEIAGRTIKVS+V+D G QD + D
Sbjct: 361 LDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKVSSVSDHIGTQDSAPKSAD 420
Query: 421 LDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSLGTHVVNNTGATVPVAPILGGATIS 480
D++DGGGL+LNA SRA LMQKLDR+G A+SI GSLG P L GA +
Sbjct: 421 FDDDDGGGLALNAQSRAMLMQKLDRSGIATSIVGSLG-------------VPGLNGAAFN 480
Query: 481 SLGVGTSLAAFPAFPALGAGVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDI 540
G+ P+FP P N VG PSECLLLKNMFDP E+EP FDL+I
Sbjct: 481 QPGMN------PSFPTSVLPTTAIPSFVN-EHVGLPSECLLLKNMFDPATETEPNFDLEI 524
Query: 541 RDDVEEECSRFGKLKHIYVDKNSAGFVYLRFEKSESALEAQRALNGRWFAGKMIGATFMD 600
RDDV +ECS++G + HIYVDKNSAGFVYLRF+ E+A AQRA++ RWFA KMI ATFM
Sbjct: 541 RDDVADECSKYGPVNHIYVDKNSAGFVYLRFQSVEAAAAAQRAMHMRWFAQKMISATFMP 524
BLAST of PI0022518 vs. TAIR 10
Match:
AT3G52380.1 (chloroplast RNA-binding protein 33 )
HSP 1 Score: 65.5 bits (158), Expect = 1.7e-10
Identity = 38/102 (37.25%), Postives = 56/102 (54.90%), Query Frame = 0
Query: 295 EAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMP 354
E + + Q+T A+G G RLYVGNL IT L Q+FG GTV VQ+
Sbjct: 100 EEVEEEKQTTQASGEEG-----------RLYVGNLPYTITSSELSQIFGEAGTVVDVQIV 159
Query: 355 LDE-SGHCKGFGFIQFTRLEDARNALSLNGQLEIAGRTIKVS 396
D+ + +GFGF+ +E+A+ A+ + +I GRT+KV+
Sbjct: 160 YDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVN 190
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q5RC80 | 1.9e-54 | 35.55 | RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 SV=1 | [more] |
Q14498 | 5.5e-54 | 35.54 | RNA-binding protein 39 OS=Homo sapiens OX=9606 GN=RBM39 PE=1 SV=2 | [more] |
Q8VH51 | 5.5e-54 | 35.54 | RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2 | [more] |
O13845 | 2.8e-34 | 29.35 | RNA-binding protein rsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ... | [more] |
Q86U06 | 8.5e-23 | 32.18 | Probable RNA-binding protein 23 OS=Homo sapiens OX=9606 GN=RBM23 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0K4Q5 | 2.5e-243 | 76.73 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014530 PE=4 SV=1 | [more] |
A0A1S3BIJ5 | 2.8e-242 | 76.73 | RNA-binding protein 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490271 PE=4 S... | [more] |
A0A1S3BJ70 | 1.0e-241 | 76.57 | RNA-binding protein 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490271 PE=4 S... | [more] |
A0A6J1HYU3 | 7.1e-222 | 70.64 | RNA-binding protein 39 OS=Cucurbita maxima OX=3661 GN=LOC111468152 PE=4 SV=1 | [more] |
A0A6J1GM48 | 2.7e-221 | 70.64 | RNA-binding protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111455622 PE=4 S... | [more] |
Match Name | E-value | Identity | Description | |
XP_011658601.1 | 5.2e-243 | 76.73 | RNA-binding protein 39 isoform X1 [Cucumis sativus] >XP_031744308.1 RNA-binding ... | [more] |
XP_011658603.1 | 2.0e-242 | 76.57 | RNA-binding protein 39 isoform X2 [Cucumis sativus] | [more] |
XP_008447936.1 | 5.7e-242 | 76.73 | PREDICTED: RNA-binding protein 39 isoform X1 [Cucumis melo] >XP_016900486.1 PRED... | [more] |
XP_008447937.1 | 2.2e-241 | 76.57 | PREDICTED: RNA-binding protein 39 isoform X2 [Cucumis melo] | [more] |
XP_038887515.1 | 4.0e-235 | 74.37 | RNA-binding protein 39-like isoform X2 [Benincasa hispida] | [more] |