Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTCTATTAGCTCCAATGCATTTTTTGGAGCTTGTGCTCTCATACTCCTTGGATTGCACCTTGAAATATATCAAGTAGATGCTAGGAGTTTTTCTGTCGTCGGTGAAGGCAACTATATTGTAGAAAACCAATTGACGGACCGCGTTATTAAGCATCCAAAGAGGCATATCCGTTTCTCATGGCCGACACCCAAGAGAGTACCCGACTTAGCCCCACCTTTTAGCCTGGGAATACTAACCAAAGACGTGCGTACTCCTCCGTCAGAAAATGAAGTGGGGCGCAGCATTGTAAAGCATCCAAAAAGCCACATTCGCTTCTCTTTGCCGAAACCTAAGAGAGTACCTGACTTAGCTCCACCTTTCAGCTTGGGAATACTATCGAAAGACGTTCGTACTGCTCCGTCTGGGCCGAGTCAAAGAACTTTGGACGACCCATCTCCCCCATCGCATGTCCTACCCATCATTTTACATAAGGAATCTAGGATCAAGTTTGGAATATTGCCAAAAGGCGTGCGTGTTCCTCCGTCTGGGCCGAGTGTAAGAACCTAA
mRNA sequence
ATGATGTCTATTAGCTCCAATGCATTTTTTGGAGCTTGTGCTCTCATACTCCTTGGATTGCACCTTGAAATATATCAAGTAGATGCTAGGAGTTTTTCTGTCGTCGGTGAAGGCAACTATATTGTAGAAAACCAATTGACGGACCGCGTTATTAAGCATCCAAAGAGGCATATCCGTTTCTCATGGCCGACACCCAAGAGAGTACCCGACTTAGCCCCACCTTTTAGCCTGGGAATACTAACCAAAGACGTGCGTACTCCTCCGTCAGAAAATGAAGTGGGGCGCAGCATTGTAAAGCATCCAAAAAGCCACATTCGCTTCTCTTTGCCGAAACCTAAGAGAGTACCTGACTTAGCTCCACCTTTCAGCTTGGGAATACTATCGAAAGACGTTCGTACTGCTCCGTCTGGGCCGAGTCAAAGAACTTTGGACGACCCATCTCCCCCATCGCATGTCCTACCCATCATTTTACATAAGGAATCTAGGATCAAGTTTGGAATATTGCCAAAAGGCGTGCGTGTTCCTCCGTCTGGGCCGAGTGTAAGAACCTAA
Coding sequence (CDS)
ATGATGTCTATTAGCTCCAATGCATTTTTTGGAGCTTGTGCTCTCATACTCCTTGGATTGCACCTTGAAATATATCAAGTAGATGCTAGGAGTTTTTCTGTCGTCGGTGAAGGCAACTATATTGTAGAAAACCAATTGACGGACCGCGTTATTAAGCATCCAAAGAGGCATATCCGTTTCTCATGGCCGACACCCAAGAGAGTACCCGACTTAGCCCCACCTTTTAGCCTGGGAATACTAACCAAAGACGTGCGTACTCCTCCGTCAGAAAATGAAGTGGGGCGCAGCATTGTAAAGCATCCAAAAAGCCACATTCGCTTCTCTTTGCCGAAACCTAAGAGAGTACCTGACTTAGCTCCACCTTTCAGCTTGGGAATACTATCGAAAGACGTTCGTACTGCTCCGTCTGGGCCGAGTCAAAGAACTTTGGACGACCCATCTCCCCCATCGCATGTCCTACCCATCATTTTACATAAGGAATCTAGGATCAAGTTTGGAATATTGCCAAAAGGCGTGCGTGTTCCTCCGTCTGGGCCGAGTGTAAGAACCTAA
Protein sequence
MMSISSNAFFGACALILLGLHLEIYQVDARSFSVVGEGNYIVENQLTDRVIKHPKRHIRFSWPTPKRVPDLAPPFSLGILTKDVRTPPSENEVGRSIVKHPKSHIRFSLPKPKRVPDLAPPFSLGILSKDVRTAPSGPSQRTLDDPSPPSHVLPIILHKESRIKFGILPKGVRVPPSGPSVRT
Homology
BLAST of PI0022270 vs. ExPASy TrEMBL
Match:
A0A5D3BVE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00110 PE=4 SV=1)
HSP 1 Score: 298.1 bits (762), Expect = 2.5e-77
Identity = 155/232 (66.81%), Postives = 164/232 (70.69%), Query Frame = 0
Query: 1 MMSISSNAFFGACALILLGLHLEIYQVDARSFSVVGEGNYIVENQLTDRVIKHPKRHIRF 60
MMS SSN FGACALILLG H E Y +DAR FSVVGEGNY++ENQLTD VI+HPKRHIRF
Sbjct: 1 MMSTSSNVLFGACALILLGFHFETYHIDARRFSVVGEGNYVIENQLTDHVIEHPKRHIRF 60
Query: 61 SWPTPKRVPDLAPPFSLGILTKDV------------------------------------ 120
SWP PKRVPDLAPPFSLGILTKDV
Sbjct: 61 SWPKPKRVPDLAPPFSLGILTKDVLTPPSENEVGDNIVKHPKNHIRFSWIWPKPKRVPDL 120
Query: 121 -------------RTPPSENEVGRSIVKHPKSHIRFSLPKPKRVPDLAPPFSLGILSKDV 180
RTPPSENE+G SI KHPKSHIRFS PKPKRVPDLAPPFSLGILSKDV
Sbjct: 121 APPFSLGILNNHLRTPPSENELGHSITKHPKSHIRFSWPKPKRVPDLAPPFSLGILSKDV 180
Query: 181 RTAPSGPSQRTLDDPSPPSHVLPIILHKESRIKFGILPKGVRVPPSGPSVRT 184
RT PSG SQRTLD+PS P HV+PIILHK+SRI+FGILPKGV VP SGPSVRT
Sbjct: 181 RTPPSGSSQRTLDNPSLPPHVVPIILHKKSRIEFGILPKGVHVPSSGPSVRT 232
BLAST of PI0022270 vs. ExPASy TrEMBL
Match:
A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1)
HSP 1 Score: 297.7 bits (761), Expect = 3.2e-77
Identity = 152/232 (65.52%), Postives = 163/232 (70.26%), Query Frame = 0
Query: 1 MMSISSNAFFGACALILLGLHLEIYQVDARSFSVVGEGNYIVENQLTDRVIKHPKRHIRF 60
MMS SSN FG CALILLGLH E Y +DARSFSV GEGNY++ENQLTD VI+HPKRHIRF
Sbjct: 8 MMSTSSNVLFGTCALILLGLHFETYHIDARSFSVFGEGNYVIENQLTDHVIEHPKRHIRF 67
Query: 61 SWPTPKRVPDLAPPFSLGILTKDV------------------------------------ 120
SWP PKRVPDLAPPFSLGILTKD+
Sbjct: 68 SWPKPKRVPDLAPPFSLGILTKDILTPPSENELGDNIVKHPKSHIRFSWVWPKPKRVPDL 127
Query: 121 -------------RTPPSENEVGRSIVKHPKSHIRFSLPKPKRVPDLAPPFSLGILSKDV 180
R PPSENE+G SI KHPK+HIRFS PKPKRVPDLAPPFSLGIL KDV
Sbjct: 128 APPFSLGILNNHLRNPPSENELGHSITKHPKNHIRFSWPKPKRVPDLAPPFSLGILLKDV 187
Query: 181 RTAPSGPSQRTLDDPSPPSHVLPIILHKESRIKFGILPKGVRVPPSGPSVRT 184
RT P G SQRTLD+PSPP H +PIILHK+S+IKFGILPKGVRVPPSGPSVRT
Sbjct: 188 RTPPFGSSQRTLDNPSPPPHAVPIILHKKSKIKFGILPKGVRVPPSGPSVRT 239
BLAST of PI0022270 vs. ExPASy TrEMBL
Match:
A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1)
HSP 1 Score: 173.3 bits (438), Expect = 9.2e-40
Identity = 99/183 (54.10%), Postives = 117/183 (63.93%), Query Frame = 0
Query: 1 MMSISSNAFFGACALILLGLHLEIYQVDARSFSVVGEGNYIVENQLTDRVIKHPKRHIRF 60
M+S+ +N FF ACALI LGLH EIY +A+ VV E N +EN L +I HPK+ F
Sbjct: 1 MVSVGTNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAHF 60
Query: 61 SWPTPKRVPDLAPPFSLGILTKDVRTPPSENEVGRSIVKHPKSHIR-FSLPKPKRVPDLA 120
SWP PK++PDLAPPFSLGIL+K +RTPPS G S P H+ L K V
Sbjct: 61 SWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTS-NNPPSPHVAPIILHKESMV---- 120
Query: 121 PPFSLGILSKDVRTAPSGPSQRTLDDPSPPSHVLPIILHKESRIKFGILPKGVRVPPSGP 180
+ GIL K VR PSGPS+RT D P P S+ I KESRIK+GILPKGVR+PPSGP
Sbjct: 121 ---NFGILPKGVRIPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRIPPSGP 172
Query: 181 SVR 183
S R
Sbjct: 181 SKR 172
BLAST of PI0022270 vs. ExPASy TrEMBL
Match:
A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1)
HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29
Identity = 83/183 (45.36%), Postives = 98/183 (53.55%), Query Frame = 0
Query: 1 MMSISSNAFFGACALILLGLHLEIYQVDARSFSVVGEGNYIVENQLTDRVIKHPKRHIRF 60
MMSISSN F CA++LLGLH IYQ + R+ V E N + EN+L I HPK++I F
Sbjct: 1 MMSISSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIHF 60
Query: 61 SWPTPKRVPDLAPPFSLGILTKDVRTPPSENEVGRSIVKHPKSHIRFSLPKPKRVPDLAP 120
S K P+ F GI +KDVR PPS P S P P +
Sbjct: 61 SLTKSKGKPEFDTHFRFGIFSKDVRIPPS----------GPSQRSSDSPPSPSMILPKES 120
Query: 121 PFSLGILSKDVRTAPSGPSQRTLDDPSPPSHVLPIILHKESRIKFGILPKGVRVPPSGPS 180
+ GIL K R PSGPSQR D P PPS LHK S + FG+LPKG +PPSGPS
Sbjct: 121 RINFGILPKGSRIPPSGPSQRFSDSPLPPS----TFLHKGSNMIFGMLPKGHHIPPSGPS 169
Query: 181 VRT 184
RT
Sbjct: 181 KRT 169
BLAST of PI0022270 vs. ExPASy TrEMBL
Match:
A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 2.9e-17
Identity = 63/168 (37.50%), Postives = 87/168 (51.79%), Query Frame = 0
Query: 23 EIYQVDARSFSVVGEGNYIVENQLTDRVIKHPKRHIRFSWPTPKRV---PDLAPPFSLGI 82
+IY+ DA++ V + I E +LTD ++++PK S + +R +P G+
Sbjct: 184 QIYETDAKNVVEVDVDDNIREAELTDLIVQNPKGISISSSRSSQRTLFHRTPSPSLVFGM 243
Query: 83 LTKDVRTPPSENEVGRSIVKHPKSHIRFSLPKPKRVPDLA----PPFSLGILSKDVRTAP 142
L K V PPS P P P R + +LG+L + V P
Sbjct: 244 LPKGVPIPPS----------RPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPP 303
Query: 143 SGPSQRTLDDPSPPSHVLPIILHKESRIKFGILPKGVRVPPSGPSVRT 184
SGPSQRT D P PP H +IL+K+S+I FG+LPKGV +PPSGPS RT
Sbjct: 304 SGPSQRTSDYPPPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRT 341
BLAST of PI0022270 vs. NCBI nr
Match:
KAA0038012.1 (hypothetical protein E6C27_scaffold36G002040 [Cucumis melo var. makuwa] >TYK02206.1 hypothetical protein E5676_scaffold2454G00110 [Cucumis melo var. makuwa])
HSP 1 Score: 298.1 bits (762), Expect = 5.1e-77
Identity = 155/232 (66.81%), Postives = 164/232 (70.69%), Query Frame = 0
Query: 1 MMSISSNAFFGACALILLGLHLEIYQVDARSFSVVGEGNYIVENQLTDRVIKHPKRHIRF 60
MMS SSN FGACALILLG H E Y +DAR FSVVGEGNY++ENQLTD VI+HPKRHIRF
Sbjct: 1 MMSTSSNVLFGACALILLGFHFETYHIDARRFSVVGEGNYVIENQLTDHVIEHPKRHIRF 60
Query: 61 SWPTPKRVPDLAPPFSLGILTKDV------------------------------------ 120
SWP PKRVPDLAPPFSLGILTKDV
Sbjct: 61 SWPKPKRVPDLAPPFSLGILTKDVLTPPSENEVGDNIVKHPKNHIRFSWIWPKPKRVPDL 120
Query: 121 -------------RTPPSENEVGRSIVKHPKSHIRFSLPKPKRVPDLAPPFSLGILSKDV 180
RTPPSENE+G SI KHPKSHIRFS PKPKRVPDLAPPFSLGILSKDV
Sbjct: 121 APPFSLGILNNHLRTPPSENELGHSITKHPKSHIRFSWPKPKRVPDLAPPFSLGILSKDV 180
Query: 181 RTAPSGPSQRTLDDPSPPSHVLPIILHKESRIKFGILPKGVRVPPSGPSVRT 184
RT PSG SQRTLD+PS P HV+PIILHK+SRI+FGILPKGV VP SGPSVRT
Sbjct: 181 RTPPSGSSQRTLDNPSLPPHVVPIILHKKSRIEFGILPKGVHVPSSGPSVRT 232
BLAST of PI0022270 vs. NCBI nr
Match:
KAA0037987.1 (hypothetical protein E6C27_scaffold36G001740 [Cucumis melo var. makuwa])
HSP 1 Score: 297.7 bits (761), Expect = 6.7e-77
Identity = 152/232 (65.52%), Postives = 163/232 (70.26%), Query Frame = 0
Query: 1 MMSISSNAFFGACALILLGLHLEIYQVDARSFSVVGEGNYIVENQLTDRVIKHPKRHIRF 60
MMS SSN FG CALILLGLH E Y +DARSFSV GEGNY++ENQLTD VI+HPKRHIRF
Sbjct: 8 MMSTSSNVLFGTCALILLGLHFETYHIDARSFSVFGEGNYVIENQLTDHVIEHPKRHIRF 67
Query: 61 SWPTPKRVPDLAPPFSLGILTKDV------------------------------------ 120
SWP PKRVPDLAPPFSLGILTKD+
Sbjct: 68 SWPKPKRVPDLAPPFSLGILTKDILTPPSENELGDNIVKHPKSHIRFSWVWPKPKRVPDL 127
Query: 121 -------------RTPPSENEVGRSIVKHPKSHIRFSLPKPKRVPDLAPPFSLGILSKDV 180
R PPSENE+G SI KHPK+HIRFS PKPKRVPDLAPPFSLGIL KDV
Sbjct: 128 APPFSLGILNNHLRNPPSENELGHSITKHPKNHIRFSWPKPKRVPDLAPPFSLGILLKDV 187
Query: 181 RTAPSGPSQRTLDDPSPPSHVLPIILHKESRIKFGILPKGVRVPPSGPSVRT 184
RT P G SQRTLD+PSPP H +PIILHK+S+IKFGILPKGVRVPPSGPSVRT
Sbjct: 188 RTPPFGSSQRTLDNPSPPPHAVPIILHKKSKIKFGILPKGVRVPPSGPSVRT 239
BLAST of PI0022270 vs. NCBI nr
Match:
XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida])
HSP 1 Score: 180.3 bits (456), Expect = 1.6e-41
Identity = 99/184 (53.80%), Postives = 119/184 (64.67%), Query Frame = 0
Query: 1 MMSIS-SNAFFGACALILLGLHLEIYQVDARSFSVVGEGNYIVENQLTDRVIKHPKRHIR 60
M+SIS SN FFGACA I LGLH IYQ DA++ VV +G+ +EN+L+D IKHPKRHI
Sbjct: 1 MVSISYSNVFFGACAFIFLGLHSTIYQTDAKNVFVVEKGDSTIENELSDENIKHPKRHIH 60
Query: 61 FSWPTPKRVPDLAPPFSLGILTKDVRTPPSENEVGRSIVKHPKSH-IRFSLPKPKRVPDL 120
FS KR+PDLAPPF+LGIL+K+ R PPS S P H I L K R+
Sbjct: 61 FSLGKYKRIPDLAPPFNLGILSKEERVPPSGLSQSTSDNPPPPPHVISIILHKESRI--- 120
Query: 121 APPFSLGILSKDVRTAPSGPSQRTLDDPSPPSHVLPIILHKESRIKFGILPKGVRVPPSG 180
+ +LSK R PSGPSQRT + P PP H L +ILHK+ I FGILPK + +PPSG
Sbjct: 121 ----NFRVLSKGNRIPPSGPSQRTSESPPPPPHALSVILHKKPGINFGILPKSMHIPPSG 177
Query: 181 PSVR 183
PS R
Sbjct: 181 PSKR 177
BLAST of PI0022270 vs. NCBI nr
Match:
KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])
HSP 1 Score: 173.3 bits (438), Expect = 1.9e-39
Identity = 99/183 (54.10%), Postives = 117/183 (63.93%), Query Frame = 0
Query: 1 MMSISSNAFFGACALILLGLHLEIYQVDARSFSVVGEGNYIVENQLTDRVIKHPKRHIRF 60
M+S+ +N FF ACALI LGLH EIY +A+ VV E N +EN L +I HPK+ F
Sbjct: 1 MVSVGTNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAHF 60
Query: 61 SWPTPKRVPDLAPPFSLGILTKDVRTPPSENEVGRSIVKHPKSHIR-FSLPKPKRVPDLA 120
SWP PK++PDLAPPFSLGIL+K +RTPPS G S P H+ L K V
Sbjct: 61 SWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTS-NNPPSPHVAPIILHKESMV---- 120
Query: 121 PPFSLGILSKDVRTAPSGPSQRTLDDPSPPSHVLPIILHKESRIKFGILPKGVRVPPSGP 180
+ GIL K VR PSGPS+RT D P P S+ I KESRIK+GILPKGVR+PPSGP
Sbjct: 121 ---NFGILPKGVRIPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRIPPSGP 172
Query: 181 SVR 183
S R
Sbjct: 181 SKR 172
BLAST of PI0022270 vs. NCBI nr
Match:
KAA0043502.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK01137.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])
HSP 1 Score: 139.8 bits (351), Expect = 2.3e-29
Identity = 83/183 (45.36%), Postives = 98/183 (53.55%), Query Frame = 0
Query: 1 MMSISSNAFFGACALILLGLHLEIYQVDARSFSVVGEGNYIVENQLTDRVIKHPKRHIRF 60
MMSISSN F CA++LLGLH IYQ + R+ V E N + EN+L I HPK++I F
Sbjct: 1 MMSISSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIHF 60
Query: 61 SWPTPKRVPDLAPPFSLGILTKDVRTPPSENEVGRSIVKHPKSHIRFSLPKPKRVPDLAP 120
S K P+ F GI +KDVR PPS P S P P +
Sbjct: 61 SLTKSKGKPEFDTHFRFGIFSKDVRIPPS----------GPSQRSSDSPPSPSMILPKES 120
Query: 121 PFSLGILSKDVRTAPSGPSQRTLDDPSPPSHVLPIILHKESRIKFGILPKGVRVPPSGPS 180
+ GIL K R PSGPSQR D P PPS LHK S + FG+LPKG +PPSGPS
Sbjct: 121 RINFGILPKGSRIPPSGPSQRFSDSPLPPS----TFLHKGSNMIFGMLPKGHHIPPSGPS 169
Query: 181 VRT 184
RT
Sbjct: 181 KRT 169
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BVE5 | 2.5e-77 | 66.81 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7T8R0 | 3.2e-77 | 65.52 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3CGG1 | 9.2e-40 | 54.10 | Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... | [more] |
| A0A5D3BP86 | 1.1e-29 | 45.36 | Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... | [more] |
| A0A6J1HRH7 | 2.9e-17 | 37.50 | actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0038012.1 | 5.1e-77 | 66.81 | hypothetical protein E6C27_scaffold36G002040 [Cucumis melo var. makuwa] >TYK0220... | [more] |
| KAA0037987.1 | 6.7e-77 | 65.52 | hypothetical protein E6C27_scaffold36G001740 [Cucumis melo var. makuwa] | [more] |
| XP_038882352.1 | 1.6e-41 | 53.80 | uncharacterized protein LOC120073615 [Benincasa hispida] | [more] |
| KAA0040932.1 | 1.9e-39 | 54.10 | proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK1060... | [more] |
| KAA0043502.1 | 2.3e-29 | 45.36 | proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK0113... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
