PI0022258 (gene) Melon (PI 482460) v1

Overview


Name	PI0022258
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr08: 16431875 .. 16432342 (+)
RNA-Seq Expression	PI0022258
Synteny	PI0022258

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTACAATGGCTCTAACTCCATTGGCCTGCTCATGCTAAATTCCAACGGCTATGACTACTCTATGGCGGAGTTTGGTTTCATGAGCCAACACCAGTCTGATGGAGACCCAATTGGAGACAATCCTGAGAGTGAACAGACTTACCACAGTTGTTATGGGTGGCCGTTGAATGATCTCGACCCCACCGATCTCTTCTTCAATTGTGAATACCCTTATGGCAATCAAAATAGCTGCGTAAATGAGAGTACAACAGAACTCATTCTTTACCAGAATGAGAATCAACTTGAGGATTATAATGGTGATTCTAGAAACTTGTACTATGAATTTTCTTGGGATTGCCTTCGGTTTTGGTTTGGACTTGGGGAAGATGAGCAACATCAAGAATGTAATGGGCAAGAAATGACACCTGAAAATGACTGCAGATTTGATGCTCTGGCACTCTTAGAAGCCATCCTGGGGTATTGA

mRNA sequence

ATGATTTACAATGGCTCTAACTCCATTGGCCTGCTCATGCTAAATTCCAACGGCTATGACTACTCTATGGCGGAGTTTGGTTTCATGAGCCAACACCAGTCTGATGGAGACCCAATTGGAGACAATCCTGAGAGTGAACAGACTTACCACAGTTGTTATGGGTGGCCGTTGAATGATCTCGACCCCACCGATCTCTTCTTCAATTGTGAATACCCTTATGGCAATCAAAATAGCTGCGTAAATGAGAGTACAACAGAACTCATTCTTTACCAGAATGAGAATCAACTTGAGGATTATAATGGTGATTCTAGAAACTTGTACTATGAATTTTCTTGGGATTGCCTTCGGTTTTGGTTTGGACTTGGGGAAGATGAGCAACATCAAGAATGTAATGGGCAAGAAATGACACCTGAAAATGACTGCAGATTTGATGCTCTGGCACTCTTAGAAGCCATCCTGGGGTATTGA

Coding sequence (CDS)

ATGATTTACAATGGCTCTAACTCCATTGGCCTGCTCATGCTAAATTCCAACGGCTATGACTACTCTATGGCGGAGTTTGGTTTCATGAGCCAACACCAGTCTGATGGAGACCCAATTGGAGACAATCCTGAGAGTGAACAGACTTACCACAGTTGTTATGGGTGGCCGTTGAATGATCTCGACCCCACCGATCTCTTCTTCAATTGTGAATACCCTTATGGCAATCAAAATAGCTGCGTAAATGAGAGTACAACAGAACTCATTCTTTACCAGAATGAGAATCAACTTGAGGATTATAATGGTGATTCTAGAAACTTGTACTATGAATTTTCTTGGGATTGCCTTCGGTTTTGGTTTGGACTTGGGGAAGATGAGCAACATCAAGAATGTAATGGGCAAGAAATGACACCTGAAAATGACTGCAGATTTGATGCTCTGGCACTCTTAGAAGCCATCCTGGGGTATTGA

Protein sequence

MIYNGSNSIGLLMLNSNGYDYSMAEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWPLNDLDPTDLFFNCEYPYGNQNSCVNESTTELILYQNENQLEDYNGDSRNLYYEFSWDCLRFWFGLGEDEQHQECNGQEMTPENDCRFDALALLEAILGY

Homology

[Close]

BLAST of PI0022258 vs. ExPASy TrEMBL
Match: A0A5A7TUT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001440 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 7.7e-80
Identity = 139/155 (89.68%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MIYNGSNSIGLLMLNSNGYDYSMAEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWPLNDL 60
           MIYNGS+SIGLLMLN+N Y+YS+AEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWP N++
Sbjct: 4   MIYNGSDSIGLLMLNANDYNYSIAEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWPSNEV 63

Query: 61  DPTDLFFNCEYPYGNQNSCVNESTTELILYQNENQLEDYNGDSRNLYYEFSWDCLRFWFG 120
           +PTDLFFNCEYPYGNQN C+NESTTELILYQNENQLEDYNGDSRNLYYEFSWDCLRFWFG
Sbjct: 64  EPTDLFFNCEYPYGNQNGCINESTTELILYQNENQLEDYNGDSRNLYYEFSWDCLRFWFG 123

Query: 121 LGEDEQHQECNGQEMTPENDCRFDALALLEAILGY 156
           LGE+EQ QE NGQE+TPENDCR DALALLEAILGY
Sbjct: 124 LGEEEQGQERNGQELTPENDCRSDALALLEAILGY 158

[Close]

BLAST of PI0022258 vs. ExPASy TrEMBL
Match: A0A0A0KZF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293140 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.6e-75
Identity = 135/155 (87.10%), Postives = 144/155 (92.90%), Query Frame = 0


Query: 1   MIYNGSNSIGLLMLNSNGYDYSMAEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWPLNDL 60
           MIYNGS+SIGLLMLN+NGYD  + EFGFMSQHQSDGDPIGDNPESEQ YHSCYGW  N++
Sbjct: 4   MIYNGSDSIGLLMLNANGYD--IPEFGFMSQHQSDGDPIGDNPESEQAYHSCYGWSSNEV 63

Query: 61  DPTDLFFNCEYPYGNQNSCVNESTTELILYQNENQLEDYNGDSRNLYYEFSWDCLRFWFG 120
           +PTDLFFNCEY YGNQN C+NESTTELILYQNENQLEDYNGDSRNLYYEFSWDCLRFWFG
Sbjct: 64  NPTDLFFNCEYLYGNQNGCINESTTELILYQNENQLEDYNGDSRNLYYEFSWDCLRFWFG 123

Query: 121 LGEDEQHQECNGQEMTPENDCRFDALALLEAILGY 156
           +GEDEQ QE NGQE+TPENDCR DALALLEAILGY
Sbjct: 124 IGEDEQGQERNGQELTPENDCRSDALALLEAILGY 156

[Close]

BLAST of PI0022258 vs. NCBI nr
Match: KAA0047323.1 (hypothetical protein E6C27_scaffold908G001440 [Cucumis melo var. makuwa])

HSP 1 Score: 306.2 bits (783), Expect = 1.6e-79
Identity = 139/155 (89.68%), Postives = 149/155 (96.13%), Query Frame = 0


Query: 1   MIYNGSNSIGLLMLNSNGYDYSMAEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWPLNDL 60
           MIYNGS+SIGLLMLN+N Y+YS+AEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWP N++
Sbjct: 4   MIYNGSDSIGLLMLNANDYNYSIAEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWPSNEV 63

Query: 61  DPTDLFFNCEYPYGNQNSCVNESTTELILYQNENQLEDYNGDSRNLYYEFSWDCLRFWFG 120
           +PTDLFFNCEYPYGNQN C+NESTTELILYQNENQLEDYNGDSRNLYYEFSWDCLRFWFG
Sbjct: 64  EPTDLFFNCEYPYGNQNGCINESTTELILYQNENQLEDYNGDSRNLYYEFSWDCLRFWFG 123

Query: 121 LGEDEQHQECNGQEMTPENDCRFDALALLEAILGY 156
           LGE+EQ QE NGQE+TPENDCR DALALLEAILGY
Sbjct: 124 LGEEEQGQERNGQELTPENDCRSDALALLEAILGY 158

[Close]

BLAST of PI0022258 vs. NCBI nr
Match: KGN54204.1 (hypothetical protein Csa_017990 [Cucumis sativus])

HSP 1 Score: 291.2 bits (744), Expect = 5.3e-75
Identity = 135/155 (87.10%), Postives = 144/155 (92.90%), Query Frame = 0


Query: 1   MIYNGSNSIGLLMLNSNGYDYSMAEFGFMSQHQSDGDPIGDNPESEQTYHSCYGWPLNDL 60
           MIYNGS+SIGLLMLN+NGYD  + EFGFMSQHQSDGDPIGDNPESEQ YHSCYGW  N++
Sbjct: 4   MIYNGSDSIGLLMLNANGYD--IPEFGFMSQHQSDGDPIGDNPESEQAYHSCYGWSSNEV 63

Query: 61  DPTDLFFNCEYPYGNQNSCVNESTTELILYQNENQLEDYNGDSRNLYYEFSWDCLRFWFG 120
           +PTDLFFNCEY YGNQN C+NESTTELILYQNENQLEDYNGDSRNLYYEFSWDCLRFWFG
Sbjct: 64  NPTDLFFNCEYLYGNQNGCINESTTELILYQNENQLEDYNGDSRNLYYEFSWDCLRFWFG 123

Query: 121 LGEDEQHQECNGQEMTPENDCRFDALALLEAILGY 156
           +GEDEQ QE NGQE+TPENDCR DALALLEAILGY
Sbjct: 124 IGEDEQGQERNGQELTPENDCRSDALALLEAILGY 156

[Close]

BLAST of PI0022258 vs. NCBI nr
Match: KAG6595286.1 (hypothetical protein SDJN03_11839, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 174.9 bits (442), Expect = 5.5e-40
Identity = 93/158 (58.86%), Postives = 113/158 (71.52%), Query Frame = 0


Query: 4   NGSNSIGLLMLNSNGYDY---SMAEF--GFMSQHQ-SDGDPIGDNPESEQTYHSCYGWPL 63
           +GSNSIGLLM N+N YDY   S + F  GF  QHQ SDGDPI D+PE ++T  SC+    
Sbjct: 4   SGSNSIGLLMANANSYDYPGRSPSPFWTGFTGQHQFSDGDPIEDDPEGDRTNLSCFENSQ 63

Query: 64  NDLDPTDLFFNCEYPYGNQNSCVNESTTELILYQNENQLEDYNGDSRNLYYEFSWDCLRF 123
           N+LD +DL FN + PY NQ+ C  E+  ELIL+ NE+Q EDY GD RNLYYEF W C R+
Sbjct: 64  NELDSSDLIFNGQDPYDNQSGCTMEN-RELILFHNEDQTEDYTGDPRNLYYEFDWACFRY 123

Query: 124 WFGLGEDEQHQECNGQEMTPENDCRFDALALLEAILGY 156
           WFGLGEDE  Q+ NGQE+  E DC  +A+ALLE+ILGY
Sbjct: 124 WFGLGEDE--QDWNGQELRLEQDCSSEAVALLESILGY 158

The following BLAST results are available for this feature:

BLAST of PI0022258 vs.


Match Name	E-value	Identity	Description

BLAST of PI0022258 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TUT5	7.7e-80	89.68	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KZF2	2.6e-75	87.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293140 PE=4 SV=1	[more]

BLAST of PI0022258 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047323.1	1.6e-79	89.68	hypothetical protein E6C27_scaffold908G001440 [Cucumis melo var. makuwa]	[more]
KGN54204.1	5.3e-75	87.10	hypothetical protein Csa_017990 [Cucumis sativus]	[more]
KAG6595286.1	5.5e-40	58.86	hypothetical protein SDJN03_11839, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of PI0022258 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0022258.1	PI0022258.1	mRNA