Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCTCCGAGTCCCGTAACGATGCTTTCTCCCTCCTCCGTCTTCGTGCCGCCTTCTTCCTCCCCATCTACGCCTTTTCCCTCTTCCTCGCCGTCTCCACCGTCTCCTCCACCCTCATCTCCTTCCAATCCAAACGCCCTTCTCTCAAATCCGCTCTCTCCGGCTTCAAAAACTCCTGGACTCGTCCTCTTGTTACCACGATTTGCATCTACGCGATTCTCGTAGCGTACTCTATTGTGCCTAACACGCTCGCTTCGATTTCTCCATCTCCGGCTTTGAGGTTTGTGGTTTTGGTGTTTGGCGTTATTTTTGAGGTGTATTTGATTTCAATTATGAGTTTAGGGCTTGTTGTTTCGATTGCCGAAGAGAGATTTGGTTTTGATGCGATTCGTTATGCGGCGGGGTTGATGGCCGATCGGAGATTGAGTGGTTCGATTCTTACGGCGATGTTTCTTGTTGCGTCGAGTTTGATCTCGTCGGAGATGGAGGGGCTCATGGACGGGGTTGATCATTGGATGAGGTCGACGGCGGCGGTGACGACGAATGTGGCGGTGAGCGTTGGGGATAAGATCGGGTTAATTTCTTTGTACGGTATGGTAATTATTTTCGGGTATGTGGTAACTACGGTTTTTTACTGTGAGTGTAGAAAGAAGGATTTTGTTAGGGTGGAAAATGATGAGGATCATGATCATATTGTCATGGTTTAA
mRNA sequence
ATGTCTTCTCCGAGTCCCGTAACGATGCTTTCTCCCTCCTCCGTCTTCGTGCCGCCTTCTTCCTCCCCATCTACGCCTTTTCCCTCTTCCTCGCCGTCTCCACCGTCTCCTCCACCCTCATCTCCTTCCAATCCAAACGCCCTTCTCTCAAATCCGCTCTCTCCGGCTTCAAAAACTCCTGGACTCGTCCTCTTGTTTGTGGTTTTGGTGTTTGGCGTTATTTTTGAGGTGTATTTGATTTCAATTATGAGTTTAGGGCTTGTTGTTTCGATTGCCGAAGAGAGATTTGGTTTTGATGCGATTCGTTATGCGGCGGGGTTGATGGCCGATCGGAGATTGAGTGGTTCGATTCTTACGGCGATGTTTCTTGTTGCGTCGAGTTTGATCTCGTCGGAGATGGAGGGGCTCATGGACGGGGTTGATCATTGGATGAGGTCGACGGCGGCGGTGACGACGAATGTGGCGGTGAGCGTTGGGGATAAGATCGGGTTAATTTCTTTGTACGGTATGGTAATTATTTTCGGGTATGTGGTAACTACGGTTTTTTACTGTGAGTGTAGAAAGAAGGATTTTGTTAGGGTGGAAAATGATGAGGATCATGATCATATTGTCATGGTTTAA
Coding sequence (CDS)
ATGTCTTCTCCGAGTCCCGTAACGATGCTTTCTCCCTCCTCCGTCTTCGTGCCGCCTTCTTCCTCCCCATCTACGCCTTTTCCCTCTTCCTCGCCGTCTCCACCGTCTCCTCCACCCTCATCTCCTTCCAATCCAAACGCCCTTCTCTCAAATCCGCTCTCTCCGGCTTCAAAAACTCCTGGACTCGTCCTCTTGTTTGTGGTTTTGGTGTTTGGCGTTATTTTTGAGGTGTATTTGATTTCAATTATGAGTTTAGGGCTTGTTGTTTCGATTGCCGAAGAGAGATTTGGTTTTGATGCGATTCGTTATGCGGCGGGGTTGATGGCCGATCGGAGATTGAGTGGTTCGATTCTTACGGCGATGTTTCTTGTTGCGTCGAGTTTGATCTCGTCGGAGATGGAGGGGCTCATGGACGGGGTTGATCATTGGATGAGGTCGACGGCGGCGGTGACGACGAATGTGGCGGTGAGCGTTGGGGATAAGATCGGGTTAATTTCTTTGTACGGTATGGTAATTATTTTCGGGTATGTGGTAACTACGGTTTTTTACTGTGAGTGTAGAAAGAAGGATTTTGTTAGGGTGGAAAATGATGAGGATCATGATCATATTGTCATGGTTTAA
Protein sequence
MSSPSPVTMLSPSSVFVPPSSSPSTPFPSSSPSPPSPPPSSPSNPNALLSNPLSPASKTPGLVLLFVVLVFGVIFEVYLISIMSLGLVVSIAEERFGFDAIRYAAGLMADRRLSGSILTAMFLVASSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMVIIFGYVVTTVFYCECRKKDFVRVENDEDHDHIVMV
Homology
BLAST of PI0022192 vs. ExPASy TrEMBL
Match:
A0A0A0LV14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024930 PE=4 SV=1)
HSP 1 Score: 340.1 bits (871), Expect = 6.4e-90
Identity = 193/206 (93.69%), Postives = 197/206 (95.63%), Query Frame = 0
Query: 1 MSSPSPVTMLSPSSVFVPPSSSPSTPFPSSSPSPPSPPPSSPSNPNALLSNPLSPASKTP 60
MSSPSPVT LSPSSVFVPPSSSPSTPFPSSS SPPSP SPS PNALLSNPLSPASK P
Sbjct: 1 MSSPSPVTTLSPSSVFVPPSSSPSTPFPSSSLSPPSPQLFSPSIPNALLSNPLSPASKPP 60
Query: 61 GLVLLFVVLVFGVIFEVYLISIMSLGLVVSIAEERFGFDAIRYAAGLMADRRLSGSILTA 120
GLVLLFVVLVFG++FEVYLISI SLGLVVSIAEERFGFDAIRYAAGLMADRRLSGSILTA
Sbjct: 61 GLVLLFVVLVFGLVFEVYLISITSLGLVVSIAEERFGFDAIRYAAGLMADRRLSGSILTA 120
Query: 121 MFLVASSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMVIIFGYVVTT 180
MFLV SSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMVIIFGYVVTT
Sbjct: 121 MFLVGSSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMVIIFGYVVTT 180
Query: 181 VFYCECRKKDFVRVENDEDHDHIVMV 207
VFYCECRK+DFVRVEN+EDHDHIVMV
Sbjct: 181 VFYCECRKRDFVRVENEEDHDHIVMV 206
BLAST of PI0022192 vs. ExPASy TrEMBL
Match:
A0A5A7UQ45 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00150 PE=4 SV=1)
HSP 1 Score: 261.5 bits (667), Expect = 2.9e-66
Identity = 141/155 (90.97%), Postives = 146/155 (94.19%), Query Frame = 0
Query: 52 PLSPASKTPGLVLLFVVLVFGVIFEVYLISIMSLGLVVSIAEERFGFDAIRYAAGLMADR 111
P + AS +P L FVVLVFGV+FEVYLISIMSLGLVVSIAEERFGFDAIRYAA LMADR
Sbjct: 174 PNTLASISPSPALRFVVLVFGVVFEVYLISIMSLGLVVSIAEERFGFDAIRYAAALMADR 233
Query: 112 RLSGSILTAMFLVASSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMV 171
RLSGSILTAMFL ASSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMV
Sbjct: 234 RLSGSILTAMFLFASSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMV 293
Query: 172 IIFGYVVTTVFYCECRKKDFVRVENDEDHDHIVMV 207
IIFGYVVTTVFYCECRK+DFVRVEN+EDHDHIVMV
Sbjct: 294 IIFGYVVTTVFYCECRKRDFVRVENEEDHDHIVMV 328
BLAST of PI0022192 vs. ExPASy TrEMBL
Match:
A0A6J1K518 (uncharacterized protein LOC111492360 OS=Cucurbita maxima OX=3661 GN=LOC111492360 PE=4 SV=1)
HSP 1 Score: 233.4 bits (594), Expect = 8.4e-58
Identity = 126/160 (78.75%), Postives = 142/160 (88.75%), Query Frame = 0
Query: 47 ALLSNPLSPASKTPGLVLLFVVLVFGVIFEVYLISIMSLGLVVSIAEERFGFDAIRYAAG 106
+++ N L+ S++P L F +LV GVIFEVYLI+++SLGLVVSIAEERFGFDAIR AA
Sbjct: 164 SIVPNTLASISQSP--ALRFAILVAGVIFEVYLIAVLSLGLVVSIAEERFGFDAIRAAAA 223
Query: 107 LMADRRLSGSILTAMFLVASSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLIS 166
LMADRRLSGSILTAMFL+ASS IS EMEGLMDGVDHWMR+TAAVT+NVA+ V DK+GLIS
Sbjct: 224 LMADRRLSGSILTAMFLLASSSISWEMEGLMDGVDHWMRTTAAVTSNVAIGVWDKMGLIS 283
Query: 167 LYGMVIIFGYVVTTVFYCECRKKDFVRVENDEDHDHIVMV 207
LYGMVII GYVVTTVFYCECRKKDFVRVEN+EDHDHIV V
Sbjct: 284 LYGMVIISGYVVTTVFYCECRKKDFVRVENEEDHDHIVTV 321
BLAST of PI0022192 vs. ExPASy TrEMBL
Match:
A0A5N6R735 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013541 PE=4 SV=1)
HSP 1 Score: 141.0 bits (354), Expect = 5.7e-30
Identity = 74/145 (51.03%), Postives = 106/145 (73.10%), Query Frame = 0
Query: 53 LSPASKTPGLVLLFVVLVFGVIFEVYLISIMSLGLVVSIAEERFGFDAIRYAAGLMADRR 112
L+P + +PG F+VLV G FE+YL++++SLGLVVSI EER G+DAIR +G+MA RR
Sbjct: 166 LAPLAGSPGSE--FLVLVIGSCFEIYLMAVLSLGLVVSIVEERLGWDAIRVGSGIMAGRR 225
Query: 113 LSGSILTAMFLVASSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMVI 172
LSG +L+ +F++ S IS +++ +MDG+D + ST + VA V DK+GLI LYG+V+
Sbjct: 226 LSGWVLSGLFVLVSGAISRDLQRMMDGLDLSLESTTSTVMMVATGVKDKVGLIFLYGIVV 285
Query: 173 IFGYVVTTVFYCECRKKDFVRVEND 198
++ Y+VTTVFYCECRK+ R E +
Sbjct: 286 VWSYIVTTVFYCECRKRHVGRGEEE 308
BLAST of PI0022192 vs. ExPASy TrEMBL
Match:
A0A2P5BBB7 (Transmembrane protein OS=Trema orientale OX=63057 GN=TorRG33x02_327080 PE=4 SV=1)
HSP 1 Score: 126.3 bits (316), Expect = 1.4e-25
Identity = 65/123 (52.85%), Postives = 95/123 (77.24%), Query Frame = 0
Query: 67 VVLVFGVIFEVYLISIMSLGLVVSIAEERFGFDAIRYAAGLMADRRLSGSILTAMFLVAS 126
++L+ G E+YL+++MSLGLVVSIAEERFG++AIR +GLM RR+SG +L+ MF++ +
Sbjct: 192 LILIVGSGLEIYLMAVMSLGLVVSIAEERFGWEAIRAGSGLMGGRRVSGWVLSGMFVLLT 251
Query: 127 SLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMVIIFGYVVTTVFYCEC 186
I+ E+E +M+G D + R ++ V VA VGDK+GLI LYG V+++GYVVT VFYC+C
Sbjct: 252 GYIARELEKVMNGQDPFGRPSSTV-VRVAAGVGDKLGLIGLYGAVVLWGYVVTAVFYCDC 311
Query: 187 RKK 190
R++
Sbjct: 312 RRR 313
BLAST of PI0022192 vs. NCBI nr
Match:
KAA0055589.1 (hypothetical protein E6C27_scaffold222G00710 [Cucumis melo var. makuwa] >TYK01336.1 uncharacterized protein E5676_scaffold29G00150 [Cucumis melo var. makuwa])
HSP 1 Score: 261.5 bits (667), Expect = 6.0e-66
Identity = 141/155 (90.97%), Postives = 146/155 (94.19%), Query Frame = 0
Query: 52 PLSPASKTPGLVLLFVVLVFGVIFEVYLISIMSLGLVVSIAEERFGFDAIRYAAGLMADR 111
P + AS +P L FVVLVFGV+FEVYLISIMSLGLVVSIAEERFGFDAIRYAA LMADR
Sbjct: 174 PNTLASISPSPALRFVVLVFGVVFEVYLISIMSLGLVVSIAEERFGFDAIRYAAALMADR 233
Query: 112 RLSGSILTAMFLVASSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMV 171
RLSGSILTAMFL ASSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMV
Sbjct: 234 RLSGSILTAMFLFASSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMV 293
Query: 172 IIFGYVVTTVFYCECRKKDFVRVENDEDHDHIVMV 207
IIFGYVVTTVFYCECRK+DFVRVEN+EDHDHIVMV
Sbjct: 294 IIFGYVVTTVFYCECRKRDFVRVENEEDHDHIVMV 328
BLAST of PI0022192 vs. NCBI nr
Match:
KAE8652471.1 (hypothetical protein Csa_014189 [Cucumis sativus])
HSP 1 Score: 259.2 bits (661), Expect = 3.0e-65
Identity = 139/155 (89.68%), Postives = 145/155 (93.55%), Query Frame = 0
Query: 52 PLSPASKTPGLVLLFVVLVFGVIFEVYLISIMSLGLVVSIAEERFGFDAIRYAAGLMADR 111
P + AS +P FVVLVFG++FEVYLISI SLGLVVSIAEERFGFDAIRYAAGLMADR
Sbjct: 185 PNTLASISPSPAFRFVVLVFGLVFEVYLISITSLGLVVSIAEERFGFDAIRYAAGLMADR 244
Query: 112 RLSGSILTAMFLVASSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMV 171
RLSGSILTAMFLV SSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMV
Sbjct: 245 RLSGSILTAMFLVGSSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMV 304
Query: 172 IIFGYVVTTVFYCECRKKDFVRVENDEDHDHIVMV 207
IIFGYVVTTVFYCECRK+DFVRVEN+EDHDHIVMV
Sbjct: 305 IIFGYVVTTVFYCECRKRDFVRVENEEDHDHIVMV 339
BLAST of PI0022192 vs. NCBI nr
Match:
XP_038889309.1 (uncharacterized protein LOC120079221 [Benincasa hispida])
HSP 1 Score: 242.3 bits (617), Expect = 3.7e-60
Identity = 130/155 (83.87%), Postives = 141/155 (90.97%), Query Frame = 0
Query: 52 PLSPASKTPGLVLLFVVLVFGVIFEVYLISIMSLGLVVSIAEERFGFDAIRYAAGLMADR 111
P + AS +P L L FVVLVFGV+FEVYLISI+SL LVVSIAE+RFGFDAIR AAGLMADR
Sbjct: 171 PNTLASISPSLPLRFVVLVFGVVFEVYLISILSLSLVVSIAEDRFGFDAIRVAAGLMADR 230
Query: 112 RLSGSILTAMFLVASSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMV 171
+L GSILTAMFL+ASS ISSEMEGLMDGVDHWMRSTAAVT+NV + VGDKIGLISLYGMV
Sbjct: 231 KLCGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVVIGVGDKIGLISLYGMV 290
Query: 172 IIFGYVVTTVFYCECRKKDFVRVENDEDHDHIVMV 207
II GYVVTTVFYCECRK+DFVRVEN+ED DHIVMV
Sbjct: 291 IISGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV 325
BLAST of PI0022192 vs. NCBI nr
Match:
XP_022997441.1 (uncharacterized protein LOC111492360 [Cucurbita maxima] >XP_022997442.1 uncharacterized protein LOC111492360 [Cucurbita maxima])
HSP 1 Score: 233.4 bits (594), Expect = 1.7e-57
Identity = 126/160 (78.75%), Postives = 142/160 (88.75%), Query Frame = 0
Query: 47 ALLSNPLSPASKTPGLVLLFVVLVFGVIFEVYLISIMSLGLVVSIAEERFGFDAIRYAAG 106
+++ N L+ S++P L F +LV GVIFEVYLI+++SLGLVVSIAEERFGFDAIR AA
Sbjct: 164 SIVPNTLASISQSP--ALRFAILVAGVIFEVYLIAVLSLGLVVSIAEERFGFDAIRAAAA 223
Query: 107 LMADRRLSGSILTAMFLVASSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLIS 166
LMADRRLSGSILTAMFL+ASS IS EMEGLMDGVDHWMR+TAAVT+NVA+ V DK+GLIS
Sbjct: 224 LMADRRLSGSILTAMFLLASSSISWEMEGLMDGVDHWMRTTAAVTSNVAIGVWDKMGLIS 283
Query: 167 LYGMVIIFGYVVTTVFYCECRKKDFVRVENDEDHDHIVMV 207
LYGMVII GYVVTTVFYCECRKKDFVRVEN+EDHDHIV V
Sbjct: 284 LYGMVIISGYVVTTVFYCECRKKDFVRVENEEDHDHIVTV 321
BLAST of PI0022192 vs. NCBI nr
Match:
KAG6598865.1 (hypothetical protein SDJN03_08643, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 233.4 bits (594), Expect = 1.7e-57
Identity = 129/162 (79.63%), Postives = 139/162 (85.80%), Query Frame = 0
Query: 45 PNALLSNPLSPASKTPGLVLLFVVLVFGVIFEVYLISIMSLGLVVSIAEERFGFDAIRYA 104
PN L S SPA + F +LV GVIFEVYLI+I+SLGLVVSIAEERFGFDAIR A
Sbjct: 167 PNTLASISQSPAVR-------FAILVVGVIFEVYLIAILSLGLVVSIAEERFGFDAIRTA 226
Query: 105 AGLMADRRLSGSILTAMFLVASSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGL 164
A LMADRRLSGSILTAMFL+ASS IS EMEGLMDGVDHWMR+TAAVT+NVA+ V DK+GL
Sbjct: 227 AALMADRRLSGSILTAMFLLASSSISWEMEGLMDGVDHWMRTTAAVTSNVAIGVWDKMGL 286
Query: 165 ISLYGMVIIFGYVVTTVFYCECRKKDFVRVENDEDHDHIVMV 207
ISLYGMVII GYVVTTVFYCECRKKDFVRVEN+EDHDHIV V
Sbjct: 287 ISLYGMVIISGYVVTTVFYCECRKKDFVRVENEEDHDHIVTV 321
BLAST of PI0022192 vs. TAIR 10
Match:
AT4G16850.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 90.1 bits (222), Expect = 2.2e-18
Identity = 56/131 (42.75%), Postives = 76/131 (58.02%), Query Frame = 0
Query: 59 TPGLVLLFVVLVFGVIFEVYLISIMSLGLVVSIAEERFGFDAIRYAAGLMADRRLSGSIL 118
TP L L +L GV EVY+++I LG VVS+ EER+GFDAI+ LM RR++G L
Sbjct: 169 TPTLRYLITILFLGV--EVYIMAITGLGFVVSVLEERYGFDAIKEGTALMKGRRITGLAL 228
Query: 119 TAMFLVASSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMVIIFGYVV 178
+F+ SS I ME L +D + S + + V D L+ +YG ++ YVV
Sbjct: 229 AGVFVFLSSFIGHGMEKLAKELDMDLSSGSWWRSVVVAGGWDGWKLVCMYGAEVVLSYVV 288
Query: 179 TTVFYCECRKK 190
TVFYCECRK+
Sbjct: 289 ITVFYCECRKR 297
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LV14 | 6.4e-90 | 93.69 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024930 PE=4 SV=1 | [more] |
A0A5A7UQ45 | 2.9e-66 | 90.97 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1K518 | 8.4e-58 | 78.75 | uncharacterized protein LOC111492360 OS=Cucurbita maxima OX=3661 GN=LOC111492360... | [more] |
A0A5N6R735 | 5.7e-30 | 51.03 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013541 PE=4 SV=1 | [more] |
A0A2P5BBB7 | 1.4e-25 | 52.85 | Transmembrane protein OS=Trema orientale OX=63057 GN=TorRG33x02_327080 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAA0055589.1 | 6.0e-66 | 90.97 | hypothetical protein E6C27_scaffold222G00710 [Cucumis melo var. makuwa] >TYK0133... | [more] |
KAE8652471.1 | 3.0e-65 | 89.68 | hypothetical protein Csa_014189 [Cucumis sativus] | [more] |
XP_038889309.1 | 3.7e-60 | 83.87 | uncharacterized protein LOC120079221 [Benincasa hispida] | [more] |
XP_022997441.1 | 1.7e-57 | 78.75 | uncharacterized protein LOC111492360 [Cucurbita maxima] >XP_022997442.1 uncharac... | [more] |
KAG6598865.1 | 1.7e-57 | 79.63 | hypothetical protein SDJN03_08643, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
AT4G16850.1 | 2.2e-18 | 42.75 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |