PI0022139 (gene) Melon (PI 482460) v1

Overview


Name	PI0022139
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr03: 23494798 .. 23495169 (+)
RNA-Seq Expression	PI0022139
Synteny	PI0022139

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGCCAGAAGCACAAGAAATCTCATTCATCTTTTTCTTTCTTTAGTTTTTTCAAATCCAAATGGAGCAGAAAAGGAGACCACTATGACCATGGTGGCTCATGGCTAGATGAGAAGTCGAGATCGAGCAAGGTGTGGCCAAGCGATGAGGACAAAGTTCATCATTGGGTTGCTGAACCCGGTATTGATCGAAAAGCCAAAGATTACATTGATAGGATCTATCAAAACCGTGTTTTCGAATCCGAACGTCAAACCGTCACCTTACCTACCAACGTGTAAATAATGTGTAAATAATTTTTTGCATATAGTATTAGTTCATTAATTAAACTTGGCTTCTTTTAATTATGTGCTACCGGCCTAGAAGAAAAC

mRNA sequence

ATGGGTGGCCAGAAGCACAAGAAATCTCATTCATCTTTTTCTTTCTTTAGTTTTTTCAAATCCAAATGGAGCAGAAAAGGAGACCACTATGACCATGGTGGCTCATGGCTAGATGAGAAGTCGAGATCGAGCAAGGTGTGGCCAAGCGATGAGGACAAAGTTCATCATTGGGTTGCTGAACCCGGTATTGATCGAAAAGCCAAAGATTACATTGATAGGATCTATCAAAACCGTGTTTTCGAATCCGAACGTCAAACCGTCACCTTACCTACCAACGTGTAAATAATGTGTAAATAATTTTTTGCATATAGTATTAGTTCATTAATTAAACTTGGCTTCTTTTAATTATGTGCTACCGGCCTAGAAGAAAAC

Coding sequence (CDS)

ATGGGTGGCCAGAAGCACAAGAAATCTCATTCATCTTTTTCTTTCTTTAGTTTTTTCAAATCCAAATGGAGCAGAAAAGGAGACCACTATGACCATGGTGGCTCATGGCTAGATGAGAAGTCGAGATCGAGCAAGGTGTGGCCAAGCGATGAGGACAAAGTTCATCATTGGGTTGCTGAACCCGGTATTGATCGAAAAGCCAAAGATTACATTGATAGGATCTATCAAAACCGTGTTTTCGAATCCGAACGTCAAACCGTCACCTTACCTACCAACGTGTAA

Protein sequence

MGGQKHKKSHSSFSFFSFFKSKWSRKGDHYDHGGSWLDEKSRSSKVWPSDEDKVHHWVAEPGIDRKAKDYIDRIYQNRVFESERQTVTLPTNV

Homology

[Close]

BLAST of PI0022139 vs. ExPASy TrEMBL
Match: A0A0A0K8V3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014880 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.4e-44
Identity = 87/93 (93.55%), Postives = 89/93 (95.70%), Query Frame = 0


Query: 1  MGGQKHKKSHSSFSFFSFFKSKWSRKGDHYDHGGSWLDEKSRSSKVWPSDEDKVHHWVAE 60
          MGG KHKKSHSSFSFFSF KSKWSRKGDHYDHGGSWLDEKSRS KVWPSDEDK HHWVAE
Sbjct: 1  MGGHKHKKSHSSFSFFSFLKSKWSRKGDHYDHGGSWLDEKSRSGKVWPSDEDKAHHWVAE 60

Query: 61 PGIDRKAKDYIDRIYQNRVFESERQTVTLPTNV 94
          PGIDRKAKDYIDRIY+NRVFESERQTVT+PTNV
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 93

[Close]

BLAST of PI0022139 vs. ExPASy TrEMBL
Match: A0A5A7SYN4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00380 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.0e-43
Identity = 85/93 (91.40%), Postives = 89/93 (95.70%), Query Frame = 0


Query: 1  MGGQKHKKSHSSFSFFSFFKSKWSRKGDHYDHGGSWLDEKSRSSKVWPSDEDKVHHWVAE 60
          MGG KHKKSHSSFSFFSFFKSKWS+K DHYDHGGSWLD+KSRS KVWPSDEDK HHWVAE
Sbjct: 1  MGGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60

Query: 61 PGIDRKAKDYIDRIYQNRVFESERQTVTLPTNV 94
          PGIDRKAKDYIDRIY+NRVFESERQTVT+PTNV
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 93

[Close]

BLAST of PI0022139 vs. ExPASy TrEMBL
Match: A0A0A0KBW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.8e-37
Identity = 76/92 (82.61%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 1  MGGQKHKKSHSSFSFFSFFKSKWSRKGDHYDHGGSWLDEKSRSSKVWPSDEDKVHHWVAE 60
          MGG + KKSHSSFS FSFFKS+  RKGDHYDHGG+WLDE  RS+KVWPSDEDK HHWVAE
Sbjct: 1  MGGNRQKKSHSSFSIFSFFKSRRGRKGDHYDHGGAWLDEMPRSNKVWPSDEDKAHHWVAE 60

Query: 61 PGIDRKAKDYIDRIYQNRVFESERQTVTLPTN 93
          PGIDRKAKDYIDRIY+NRVFESERQTVT+  N
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTISPN 92

[Close]

BLAST of PI0022139 vs. ExPASy TrEMBL
Match: A0A0A0K7Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.8e-36
Identity = 75/92 (81.52%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MGGQKHKKSHSSFSFFSFFKSKWSRKGDHYDHGGSWLDEKSRSSKVWPSDEDKVHHWVAE 60
          MGG + KKSHSSFS FSFFKSK  RKGDHYDHGG+W DE  RS+KVWPSDEDK HHW+AE
Sbjct: 1  MGGNRQKKSHSSFSIFSFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDEDKAHHWIAE 60

Query: 61 PGIDRKAKDYIDRIYQNRVFESERQTVTLPTN 93
          PGIDRKAKDYIDRIY+NRVFESERQTVT+  N
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTISPN 92

[Close]

BLAST of PI0022139 vs. ExPASy TrEMBL
Match: A0A0A0KAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.8e-31
Identity = 69/91 (75.82%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 2  GGQKHKKSHSSFSFFSFFKSKWSRKGDHYDHGGSWLDEKSRSSKVWPSDEDKVHHWVAEP 61
          G  + KK+H+SFS FSFFKS+  RKGDH +H GS LDE  RS KVWPSDEDK HHWVAEP
Sbjct: 3  GNNRQKKAHASFSIFSFFKSRRGRKGDHCNHSGSCLDEMPRSGKVWPSDEDKAHHWVAEP 62

Query: 62 GIDRKAKDYIDRIYQNRVFESERQTVTLPTN 93
          GIDRKAKDYIDRIY+NRVFESERQTVT+  N
Sbjct: 63 GIDRKAKDYIDRIYRNRVFESERQTVTISPN 93

[Close]

BLAST of PI0022139 vs. NCBI nr
Match: KGN45868.1 (hypothetical protein Csa_004803 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 4.9e-44
Identity = 87/93 (93.55%), Postives = 89/93 (95.70%), Query Frame = 0


Query: 1  MGGQKHKKSHSSFSFFSFFKSKWSRKGDHYDHGGSWLDEKSRSSKVWPSDEDKVHHWVAE 60
          MGG KHKKSHSSFSFFSF KSKWSRKGDHYDHGGSWLDEKSRS KVWPSDEDK HHWVAE
Sbjct: 1  MGGHKHKKSHSSFSFFSFLKSKWSRKGDHYDHGGSWLDEKSRSGKVWPSDEDKAHHWVAE 60

Query: 61 PGIDRKAKDYIDRIYQNRVFESERQTVTLPTNV 94
          PGIDRKAKDYIDRIY+NRVFESERQTVT+PTNV
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 93

[Close]

BLAST of PI0022139 vs. NCBI nr
Match: KAA0035006.1 (hypothetical protein E6C27_scaffold57G00470 [Cucumis melo var. makuwa] >TYK02346.1 hypothetical protein E5676_scaffold155G00380 [Cucumis melo var. makuwa])

HSP 1 Score: 184.5 bits (467), Expect = 4.2e-43
Identity = 85/93 (91.40%), Postives = 89/93 (95.70%), Query Frame = 0


Query: 1  MGGQKHKKSHSSFSFFSFFKSKWSRKGDHYDHGGSWLDEKSRSSKVWPSDEDKVHHWVAE 60
          MGG KHKKSHSSFSFFSFFKSKWS+K DHYDHGGSWLD+KSRS KVWPSDEDK HHWVAE
Sbjct: 1  MGGHKHKKSHSSFSFFSFFKSKWSKKEDHYDHGGSWLDDKSRSGKVWPSDEDKAHHWVAE 60

Query: 61 PGIDRKAKDYIDRIYQNRVFESERQTVTLPTNV 94
          PGIDRKAKDYIDRIY+NRVFESERQTVT+PTNV
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTIPTNV 93

[Close]

BLAST of PI0022139 vs. NCBI nr
Match: KGN45870.1 (hypothetical protein Csa_004960 [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 3.8e-36
Identity = 75/92 (81.52%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MGGQKHKKSHSSFSFFSFFKSKWSRKGDHYDHGGSWLDEKSRSSKVWPSDEDKVHHWVAE 60
          MGG + KKSHSSFS FSFFKSK  RKGDHYDHGG+W DE  RS+KVWPSDEDK HHW+AE
Sbjct: 1  MGGNRQKKSHSSFSIFSFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDEDKAHHWIAE 60

Query: 61 PGIDRKAKDYIDRIYQNRVFESERQTVTLPTN 93
          PGIDRKAKDYIDRIY+NRVFESERQTVT+  N
Sbjct: 61 PGIDRKAKDYIDRIYRNRVFESERQTVTISPN 92

[Close]

BLAST of PI0022139 vs. NCBI nr
Match: KGN45869.1 (hypothetical protein Csa_005516 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 3.7e-31
Identity = 69/91 (75.82%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 2  GGQKHKKSHSSFSFFSFFKSKWSRKGDHYDHGGSWLDEKSRSSKVWPSDEDKVHHWVAEP 61
          G  + KK+H+SFS FSFFKS+  RKGDH +H GS LDE  RS KVWPSDEDK HHWVAEP
Sbjct: 3  GNNRQKKAHASFSIFSFFKSRRGRKGDHCNHSGSCLDEMPRSGKVWPSDEDKAHHWVAEP 62

Query: 62 GIDRKAKDYIDRIYQNRVFESERQTVTLPTN 93
          GIDRKAKDYIDRIY+NRVFESERQTVT+  N
Sbjct: 63 GIDRKAKDYIDRIYRNRVFESERQTVTISPN 93

[Close]

BLAST of PI0022139 vs. NCBI nr
Match: KAA0035003.1 (hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa] >TYK02343.1 hypothetical protein E5676_scaffold155G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 144.1 bits (362), Expect = 6.3e-31
Identity = 69/91 (75.82%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 2  GGQKHKKSHSSFSFFSFFKSKWSRKGDHYDHGGSWLDEKSRSSKVWPSDEDKVHHWVAEP 61
          G  + KKSHSSFS FSFFKS+  RKGD+ +H GS LDE  RS KVWPSDEDK HHWVAEP
Sbjct: 3  GNNRQKKSHSSFSIFSFFKSRRGRKGDNCNHSGSCLDEMPRSGKVWPSDEDKAHHWVAEP 62

Query: 62 GIDRKAKDYIDRIYQNRVFESERQTVTLPTN 93
          GIDRKAKDYIDRIY+NRVFESERQT+T+  N
Sbjct: 63 GIDRKAKDYIDRIYRNRVFESERQTITISPN 93

[Close]

BLAST of PI0022139 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 1.8e-12
Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = 0


Query: 1  MGGQKHKKSHSSFSFFSFFKSKWSRKGDHYDHGGSWLDEKSRSSKVWPSDEDKVHHWVAE 60
          MGG+    S   FS FSFFK   +R+    +  GSW D+   + K   SDEDK  +WVAE
Sbjct: 1  MGGKNRSHSSKRFSLFSFFK---TRRSHRVEADGSW-DDFGYTRKAMASDEDK-RYWVAE 60

Query: 61 PGIDRKAKDYIDRIYQNRVFESERQTVT 89
          PGIDRKA  +I + +  RV ESERQT++
Sbjct: 61 PGIDRKASAFIAKFHATRVSESERQTLS 83

[Close]

BLAST of PI0022139 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 5.5e-09
Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 24 SRKGDHY--DHGGSWLDEKSRSSKVWPSDEDKVHHWVAEPGIDRKAKDYIDRIYQNRVFE 83
          +R+  H+  +   SW D+   + K W SDEDK  +WVAEPGIDRKA  +I + + +RV E
Sbjct: 3  ARRSSHHRVEADASW-DDVIYTRKAWASDEDK-RYWVAEPGIDRKASAFIAKFHASRVSE 62

Query: 84 SERQTV 88
          SERQT+
Sbjct: 63 SERQTL 66

The following BLAST results are available for this feature:

BLAST of PI0022139 vs.


Match Name	E-value	Identity	Description

BLAST of PI0022139 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8V3	2.4e-44	93.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014880 PE=4 SV=1	[more]
A0A5A7SYN4	2.0e-43	91.40	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KBW1	4.8e-37	82.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1	[more]
A0A0A0K7Y2	1.8e-36	81.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1	[more]
A0A0A0KAK6	1.8e-31	75.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1	[more]

BLAST of PI0022139 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN45868.1	4.9e-44	93.55	hypothetical protein Csa_004803 [Cucumis sativus]	[more]
KAA0035006.1	4.2e-43	91.40	hypothetical protein E6C27_scaffold57G00470 [Cucumis melo var. makuwa] >TYK02346...	[more]
KGN45870.1	3.8e-36	81.52	hypothetical protein Csa_004960 [Cucumis sativus]	[more]
KGN45869.1	3.7e-31	75.82	hypothetical protein Csa_005516 [Cucumis sativus]	[more]
KAA0035003.1	6.3e-31	75.82	hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa] >TYK02343...	[more]

BLAST of PI0022139 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05858.1	1.8e-12	47.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G26620.1	5.5e-09	48.48	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33511	OS06G0632400 PROTEIN	coord: 1..88
None	No IPR available	PANTHER	PTHR33511:SF17	RIBOSOMAL PROTEIN S12	coord: 1..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0022139.1	PI0022139.1	mRNA