PI0021942 (gene) Melon (PI 482460) v1

Overview
NamePI0021942
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionPrecursor of CEP3
Locationchr08: 19571427 .. 19571747 (-)
RNA-Seq ExpressionPI0021942
SyntenyPI0021942
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCCAACCAAGCTAAGCTTTGCCTTTCTTTTCATTTCCCTTTTAATTTTGTGTCATCTTATAGATTCTGCATTCAGCAGGCCATTGACAACCCACACAAATCACCAACACTCTGACACCCTTCCAAAAAGCCCTCATTCCCAATTCCATGGTCAAACTGTACATGAAGGAAAAGCCTCAAACGACGATGCTGTTTCTACTCAAAACCCGAACCCTCCCACAGCAGCTGCGGGTTCGACTCCAGGCCGGAAGATGGACGACTTCAGGCCAACCACCCCTGGCCATAGCCCTGGCGTTGGTCATTCCATTGAGAACTAA

mRNA sequence

ATGGCCCCAACCAAGCTAAGCTTTGCCTTTCTTTTCATTTCCCTTTTAATTTTGTGTCATCTTATAGATTCTGCATTCAGCAGGCCATTGACAACCCACACAAATCACCAACACTCTGACACCCTTCCAAAAAGCCCTCATTCCCAATTCCATGGTCAAACTGTACATGAAGGAAAAGCCTCAAACGACGATGCTGTTTCTACTCAAAACCCGAACCCTCCCACAGCAGCTGCGGGTTCGACTCCAGGCCGGAAGATGGACGACTTCAGGCCAACCACCCCTGGCCATAGCCCTGGCGTTGGTCATTCCATTGAGAACTAA

Coding sequence (CDS)

ATGGCCCCAACCAAGCTAAGCTTTGCCTTTCTTTTCATTTCCCTTTTAATTTTGTGTCATCTTATAGATTCTGCATTCAGCAGGCCATTGACAACCCACACAAATCACCAACACTCTGACACCCTTCCAAAAAGCCCTCATTCCCAATTCCATGGTCAAACTGTACATGAAGGAAAAGCCTCAAACGACGATGCTGTTTCTACTCAAAACCCGAACCCTCCCACAGCAGCTGCGGGTTCGACTCCAGGCCGGAAGATGGACGACTTCAGGCCAACCACCCCTGGCCATAGCCCTGGCGTTGGTCATTCCATTGAGAACTAA

Protein sequence

MAPTKLSFAFLFISLLILCHLIDSAFSRPLTTHTNHQHSDTLPKSPHSQFHGQTVHEGKASNDDAVSTQNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIEN
Homology
BLAST of PI0021942 vs. ExPASy Swiss-Prot
Match: Q058G9 (Precursor of CEP5 OS=Arabidopsis thaliana OX=3702 GN=CEP5 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 5.3e-05
Identity = 21/44 (47.73%), Postives = 28/44 (63.64%), Query Frame = 0

Query: 63  DDAVSTQNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIEN 107
           DD     +P PP      + G+  +DFRPTTPGHSPG+GHS+ +
Sbjct: 61  DDKAMQFSPPPPPPPPSQSGGKDAEDFRPTTPGHSPGIGHSLSH 104

BLAST of PI0021942 vs. ExPASy Swiss-Prot
Match: O80460 (Precursor of CEP3 OS=Arabidopsis thaliana OX=3702 GN=CEP3 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.2e-04
Identity = 21/40 (52.50%), Postives = 26/40 (65.00%), Query Frame = 0

Query: 67  STQNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIEN 107
           S  + +PPT    S P   +D FRPT PGHSPG+GHS+ N
Sbjct: 43  SVLSSSPPTEPLESPPSHGVDTFRPTEPGHSPGIGHSVHN 82

BLAST of PI0021942 vs. ExPASy Swiss-Prot
Match: A0A1I9LMX5 (Precursor of CEP9 OS=Arabidopsis thaliana OX=3702 GN=CEP9 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 4.5e-04
Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = 0

Query: 67  STQNPNPPTAAAGSTPG---RKMDDFRPTTPGHSPGVGHSIEN 107
           ST +  P T   G++PG   +K DDF+PTTPGHSPGVGH+++N
Sbjct: 198 STDDFAPTT--PGNSPGMGHKKGDDFKPTTPGHSPGVGHAVKN 238

BLAST of PI0021942 vs. ExPASy TrEMBL
Match: A0A0A0KLC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490800 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.1e-44
Identity = 95/107 (88.79%), Postives = 99/107 (92.52%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLTTHTNHQH-SDTLPKSPHSQFHGQTVHEGK 60
           MAPTKLSFAFLFISLLILCHL+D AFSRPLTTHT HQ  SDTLPK+PH Q HGQT+HEGK
Sbjct: 5   MAPTKLSFAFLFISLLILCHLVDPAFSRPLTTHTIHQQLSDTLPKNPHFQLHGQTLHEGK 64

Query: 61  ASNDDAVSTQNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIEN 107
           ASNDDAVST NPNPP+AAA STPGRKMDDFRPTTPGHSPGVGHSIEN
Sbjct: 65  ASNDDAVSTPNPNPPSAAASSTPGRKMDDFRPTTPGHSPGVGHSIEN 111

BLAST of PI0021942 vs. ExPASy TrEMBL
Match: A0A5D3CLS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004910 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.3e-43
Identity = 94/107 (87.85%), Postives = 99/107 (92.52%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLTTHTNHQH-SDTLPKSPHSQFHGQTVHEGK 60
           MA TKLSFAFLFISLLILCHLID AFSRPLTTHT+HQ  S+TLP +PH QFHG TVHEGK
Sbjct: 1   MASTKLSFAFLFISLLILCHLIDPAFSRPLTTHTDHQQLSNTLPTNPHFQFHGHTVHEGK 60

Query: 61  ASNDDAVSTQNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIEN 107
           ASN+DAVST NPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSI+N
Sbjct: 61  ASNNDAVSTPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN 107

BLAST of PI0021942 vs. ExPASy TrEMBL
Match: A0A059AMU0 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I00950 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-08
Identity = 50/127 (39.37%), Postives = 70/127 (55.12%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLTTHTNHQH---------SDTLPKSPH---- 60
           MA  ++  AFLF+ L+  C  + S  +R L   +  Q+         +  L K P     
Sbjct: 1   MAQNRVLVAFLFL-LVAFCLKLRSTQARQLKLTSQEQNPFPNELRHVNKLLGKEPRKTIA 60

Query: 61  ---SQFHGQTVHEGKASNDDAVSTQNPNPPTAAAGST-----PGRKMDDFRPTTPGHSPG 107
                + G+T++E  A+N DA S+  P+PPTA  G+T     PGR +DDFRPT PGHSPG
Sbjct: 61  EQSKNWRGETLNE--ATNTDASSSPPPSPPTAMVGATTPPPSPGRSLDDFRPTAPGHSPG 120

BLAST of PI0021942 vs. ExPASy TrEMBL
Match: A0A4D6LRW0 (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG4g2282 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.9e-07
Identity = 43/108 (39.81%), Postives = 58/108 (53.70%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSR--PLTTHTNHQHSDTLPKSPHSQFHGQTVHEG 60
           MA  KL+   + ++L+IL   ++S   R   L   T HQ  + +P +  + F        
Sbjct: 1   MAQKKLTVCLMLVALVILLQGLESIEGRLLKLDETTEHQMQERIPTTNVAAF-------- 60

Query: 61  KASNDDAVSTQNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIEN 107
               D  VS   P PP+AAA   PGR +D+FRPT PGHSPGVGHS+ N
Sbjct: 61  ----DTDVSVSPPTPPSAAA---PGRDVDNFRPTAPGHSPGVGHSVHN 93

BLAST of PI0021942 vs. ExPASy TrEMBL
Match: V7CF84 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G245400g PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.0e-06
Identity = 45/110 (40.91%), Postives = 54/110 (49.09%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLTTHTNHQHSDTLPKSPHSQFHGQTVHEG-K 60
           MA  K  F  +F SL+I C    S   R L  H N  HSD              VH G  
Sbjct: 1   MARNKFIFTMIFFSLIIFCQRFHSTEGRHL-KHNNQVHSD--------------VHGGIS 60

Query: 61  ASNDDAVSTQNPNPPTAAAGST-----PGRKMDDFRPTTPGHSPGVGHSI 105
           A+N   +    P  P+   G+T     PGR ++DFRPTTPGHSPGVGHS+
Sbjct: 61  ATNAATLKNVAPLTPSTMVGATLAAPPPGRGVEDFRPTTPGHSPGVGHSV 95

BLAST of PI0021942 vs. NCBI nr
Match: KGN48516.1 (hypothetical protein Csa_002724 [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 4.3e-44
Identity = 95/107 (88.79%), Postives = 99/107 (92.52%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLTTHTNHQH-SDTLPKSPHSQFHGQTVHEGK 60
           MAPTKLSFAFLFISLLILCHL+D AFSRPLTTHT HQ  SDTLPK+PH Q HGQT+HEGK
Sbjct: 5   MAPTKLSFAFLFISLLILCHLVDPAFSRPLTTHTIHQQLSDTLPKNPHFQLHGQTLHEGK 64

Query: 61  ASNDDAVSTQNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIEN 107
           ASNDDAVST NPNPP+AAA STPGRKMDDFRPTTPGHSPGVGHSIEN
Sbjct: 65  ASNDDAVSTPNPNPPSAAASSTPGRKMDDFRPTTPGHSPGVGHSIEN 111

BLAST of PI0021942 vs. NCBI nr
Match: TYK12897.1 (hypothetical protein E5676_scaffold255G004910 [Cucumis melo var. makuwa])

HSP 1 Score: 184.5 bits (467), Expect = 4.8e-43
Identity = 94/107 (87.85%), Postives = 99/107 (92.52%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLTTHTNHQH-SDTLPKSPHSQFHGQTVHEGK 60
           MA TKLSFAFLFISLLILCHLID AFSRPLTTHT+HQ  S+TLP +PH QFHG TVHEGK
Sbjct: 1   MASTKLSFAFLFISLLILCHLIDPAFSRPLTTHTDHQQLSNTLPTNPHFQFHGHTVHEGK 60

Query: 61  ASNDDAVSTQNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIEN 107
           ASN+DAVST NPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSI+N
Sbjct: 61  ASNNDAVSTPNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIKN 107

BLAST of PI0021942 vs. NCBI nr
Match: KAG7027066.1 (Precursor of CEP3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 140.2 bits (352), Expect = 1.0e-29
Identity = 77/106 (72.64%), Postives = 83/106 (78.30%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLTTHTNHQHSDTLPKSPHSQFHGQTVHEGKA 60
           M PT LS AFLFI+LLI  H IDSA SRPL THTNHQ S    K  H QFHGQ+V EGK 
Sbjct: 1   MLPTNLSLAFLFIALLIFSHFIDSASSRPLKTHTNHQLSARSAKEAHFQFHGQSVAEGKG 60

Query: 61  SNDDAVSTQNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIEN 107
           + D AVST  P+PPT AAGS+PGRKMDDFRPTTPGHSPGVGHSI+N
Sbjct: 61  T-DGAVST--PSPPTTAAGSSPGRKMDDFRPTTPGHSPGVGHSIQN 103

BLAST of PI0021942 vs. NCBI nr
Match: KAG6595043.1 (Precursor of CEP3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 140.2 bits (352), Expect = 1.0e-29
Identity = 77/106 (72.64%), Postives = 83/106 (78.30%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLTTHTNHQHSDTLPKSPHSQFHGQTVHEGKA 60
           M PT LS AFLFI+LLI  H IDSA SRPL THTNHQ S    K  H QFHGQ+V EGK 
Sbjct: 1   MPPTNLSLAFLFIALLIFSHFIDSASSRPLKTHTNHQLSARSAKEAHFQFHGQSVAEGKG 60

Query: 61  SNDDAVSTQNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIEN 107
           + D AVST  P+PPT AAGS+PGRKMDDFRPTTPGHSPGVGHSI+N
Sbjct: 61  T-DGAVST--PSPPTTAAGSSPGRKMDDFRPTTPGHSPGVGHSIQN 103

BLAST of PI0021942 vs. NCBI nr
Match: KAG6604187.1 (hypothetical protein SDJN03_04796, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 125.6 bits (314), Expect = 2.6e-25
Identity = 68/107 (63.55%), Postives = 79/107 (73.83%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLTTHTNHQHSDTLPKSPHSQFHGQTVHEGKA 60
           MAPTKLSFAFLF +L++LC++ +S  SRPL T TNHQ  +   K  H QFHG++V EG  
Sbjct: 1   MAPTKLSFAFLFTALIVLCYVTESVLSRPLKTDTNHQLFERPAKDGHFQFHGESVEEGN- 60

Query: 61  SNDDAVSTQNPNPPT-AAAGSTPGRKMDDFRPTTPGHSPGVGHSIEN 107
                  T NPNP T AAA S+PGRKMDDFRPTTPGHSPGVGHSI+N
Sbjct: 61  ------GTTNPNPLTAAAAASSPGRKMDDFRPTTPGHSPGVGHSIQN 100

BLAST of PI0021942 vs. TAIR 10
Match: AT5G66815.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 3.8e-06
Identity = 21/44 (47.73%), Postives = 28/44 (63.64%), Query Frame = 0

Query: 63  DDAVSTQNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIEN 107
           DD     +P PP      + G+  +DFRPTTPGHSPG+GHS+ +
Sbjct: 61  DDKAMQFSPPPPPPPPSQSGGKDAEDFRPTTPGHSPGIGHSLSH 104

BLAST of PI0021942 vs. TAIR 10
Match: AT2G23440.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 25 Blast hits to 25 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 8.5e-06
Identity = 21/40 (52.50%), Postives = 26/40 (65.00%), Query Frame = 0

Query: 67  STQNPNPPTAAAGSTPGRKMDDFRPTTPGHSPGVGHSIEN 107
           S  + +PPT    S P   +D FRPT PGHSPG+GHS+ N
Sbjct: 43  SVLSSSPPTEPLESPPSHGVDTFRPTEPGHSPGIGHSVHN 82

BLAST of PI0021942 vs. TAIR 10
Match: AT3G50610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66816.1); Has 125 Blast hits to 60 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 4; Plants - 97; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 3.2e-05
Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = 0

Query: 67  STQNPNPPTAAAGSTPG---RKMDDFRPTTPGHSPGVGHSIEN 107
           ST +  P T   G++PG   +K DDF+PTTPGHSPGVGH+++N
Sbjct: 184 STDDFAPTT--PGNSPGMGHKKGDDFKPTTPGHSPGVGHAVKN 224

BLAST of PI0021942 vs. TAIR 10
Match: AT5G66816.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.2e-04
Identity = 17/24 (70.83%), Postives = 20/24 (83.33%), Query Frame = 0

Query: 83  GRKMDDFRPTTPGHSPGVGHSIEN 107
           G   DDF PTTPGHSPGVGH+++N
Sbjct: 73  GGYKDDFEPTTPGHSPGVGHAVKN 96

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q058G95.3e-0547.73Precursor of CEP5 OS=Arabidopsis thaliana OX=3702 GN=CEP5 PE=1 SV=1[more]
O804601.2e-0452.50Precursor of CEP3 OS=Arabidopsis thaliana OX=3702 GN=CEP3 PE=1 SV=1[more]
A0A1I9LMX54.5e-0455.81Precursor of CEP9 OS=Arabidopsis thaliana OX=3702 GN=CEP9 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KLC02.1e-4488.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490800 PE=3 SV=1[more]
A0A5D3CLS22.3e-4387.85Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A059AMU01.8e-0839.37Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I00950 PE=3 SV... [more]
A0A4D6LRW05.9e-0739.81Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG4g2282 PE=3 SV=1[more]
V7CF841.0e-0640.91Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G245400g PE=3 ... [more]
Match NameE-valueIdentityDescription
KGN48516.14.3e-4488.79hypothetical protein Csa_002724 [Cucumis sativus][more]
TYK12897.14.8e-4387.85hypothetical protein E5676_scaffold255G004910 [Cucumis melo var. makuwa][more]
KAG7027066.11.0e-2972.64Precursor of CEP3, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6595043.11.0e-2972.64Precursor of CEP3, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG6604187.12.6e-2563.55hypothetical protein SDJN03_04796, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
AT5G66815.13.8e-0647.73unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G23440.18.5e-0652.50unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G50610.13.2e-0555.81unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G66816.11.2e-0470.83unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..77
NoneNo IPR availablePANTHERPTHR33348:SF28PRECURSOR OF CEP7coord: 1..106
IPR033250C-terminally encoded peptidePANTHERPTHR33348PRECURSOR OF CEP5coord: 1..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0021942.1PI0021942.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902025 nitrate import
biological_process GO:1901371 regulation of leaf morphogenesis
biological_process GO:2000280 regulation of root development
biological_process GO:0007165 signal transduction
biological_process GO:0048364 root development
cellular_component GO:0005576 extracellular region
molecular_function GO:0005179 hormone activity