PI0021929 (gene) Melon (PI 482460) v1

Overview
NamePI0021929
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr01: 17259914 .. 17260669 (+)
RNA-Seq ExpressionPI0021929
SyntenyPI0021929
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAGCCCACGGGTGCCACTGAGGTCGTTGAGGTTTCCCCCCCTCACCATCCATGCGGTAGACCCTCCTACGCGAGCCTCTCCCATTCTCATTGTTTCAAAAGAGGGCGCCCCACCAACCATCCGGGTCTCACCGCCACCACCCCCACCTGCTGTGGATACAGCACAAAACGTTCATGACCCACACGTTAAGGACAACACCCCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTCGGCGCATACCACCACCGCCCAACCCCCCACTGTGCCCGAAGAAGATGATGATTTGGGCGAACTGTTAAGTTCCCTTGTGTGTAAGCCAGTGTTTGATTACTTTGATCAAGTATTGGCTCACCAAGCGGACCATGCGACACAACTCCAATCTTTGCAGAATACAGTCAATCAGTTGCAACGCCCCAATGCCGAAAACCTTGTGACGCCCGCTTCTCAAGAAGACATCAATGCCTTGCGAAGCGAACTGAAGGAACTTTCGGCGAACAATGCTCAGCTCTCTACCACCGTATCCAACCTCTCCACTTCCGTCACCGTTCTCACCTCCCTGGTCATCGCCCAATTTGAGATGATGCGGCAAATAGCTGCGCGACATGATAAGCAGTTTCGCACGCAAATGGAATACATGTACGCCGCAATTGTGCAACGCGTGCCTGCTCCAATCATACCGCCAGATCTTGAAACACCCTTTCCACCACTTATGCGTCTTGGCGATCCTGCTCCCCGCCAAGACAACTAA

mRNA sequence

ATGACCAGCCCACGGGTGCCACTGAGGTCGTTGAGGTTTCCCCCCCTCACCATCCATGCGGTAGACCCTCCTACGCGAGCCTCTCCCATTCTCATTGTTTCAAAAGAGGGCGCCCCACCAACCATCCGGGTCTCACCGCCACCACCCCCACCTGCTGTGGATACAGCACAAAACGTTCATGACCCACACGTTAAGGACAACACCCCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTCGGCGCATACCACCACCGCCCAACCCCCCACTGTGCCCGAAGAAGATGATGATTTGGGCGAACTGTTAAGTTCCCTTGTGTGTAAGCCAGTGTTTGATTACTTTGATCAAGTATTGGCTCACCAAGCGGACCATGCGACACAACTCCAATCTTTGCAGAATACAGTCAATCAGTTGCAACGCCCCAATGCCGAAAACCTTGTGACGCCCGCTTCTCAAGAAGACATCAATGCCTTGCGAAGCGAACTGAAGGAACTTTCGGCGAACAATGCTCAGCTCTCTACCACCGTATCCAACCTCTCCACTTCCGTCACCGTTCTCACCTCCCTGGTCATCGCCCAATTTGAGATGATGCGGCAAATAGCTGCGCGACATGATAAGCAGTTTCGCACGCAAATGGAATACATGTACGCCGCAATTGTGCAACGCGTGCCTGCTCCAATCATACCGCCAGATCTTGAAACACCCTTTCCACCACTTATGCGTCTTGGCGATCCTGCTCCCCGCCAAGACAACTAA

Coding sequence (CDS)

ATGACCAGCCCACGGGTGCCACTGAGGTCGTTGAGGTTTCCCCCCCTCACCATCCATGCGGTAGACCCTCCTACGCGAGCCTCTCCCATTCTCATTGTTTCAAAAGAGGGCGCCCCACCAACCATCCGGGTCTCACCGCCACCACCCCCACCTGCTGTGGATACAGCACAAAACGTTCATGACCCACACGTTAAGGACAACACCCCTATCCTTAATGAAGTTGGCGAGACAGCTTCTTCGGCGCATACCACCACCGCCCAACCCCCCACTGTGCCCGAAGAAGATGATGATTTGGGCGAACTGTTAAGTTCCCTTGTGTGTAAGCCAGTGTTTGATTACTTTGATCAAGTATTGGCTCACCAAGCGGACCATGCGACACAACTCCAATCTTTGCAGAATACAGTCAATCAGTTGCAACGCCCCAATGCCGAAAACCTTGTGACGCCCGCTTCTCAAGAAGACATCAATGCCTTGCGAAGCGAACTGAAGGAACTTTCGGCGAACAATGCTCAGCTCTCTACCACCGTATCCAACCTCTCCACTTCCGTCACCGTTCTCACCTCCCTGGTCATCGCCCAATTTGAGATGATGCGGCAAATAGCTGCGCGACATGATAAGCAGTTTCGCACGCAAATGGAATACATGTACGCCGCAATTGTGCAACGCGTGCCTGCTCCAATCATACCGCCAGATCTTGAAACACCCTTTCCACCACTTATGCGTCTTGGCGATCCTGCTCCCCGCCAAGACAACTAA

Protein sequence

MTSPRVPLRSLRFPPLTIHAVDPPTRASPILIVSKEGAPPTIRVSPPPPPPAVDTAQNVHDPHVKDNTPILNEVGETASSAHTTTAQPPTVPEEDDDLGELLSSLVCKPVFDYFDQVLAHQADHATQLQSLQNTVNQLQRPNAENLVTPASQEDINALRSELKELSANNAQLSTTVSNLSTSVTVLTSLVIAQFEMMRQIAARHDKQFRTQMEYMYAAIVQRVPAPIIPPDLETPFPPLMRLGDPAPRQDN
Homology
BLAST of PI0021929 vs. ExPASy TrEMBL
Match: A0A5D3DYE2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00280 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.9e-12
Identity = 53/160 (33.12%), Postives = 91/160 (56.88%), Query Frame = 0

Query: 94  EDDDLGELLSSLVCKPVFDYFDQVLAHQADHATQLQSLQNTVNQLQRPNAENLVTPASQE 153
           E  D+ + + S V K  FDYF+QVL  Q  ++ +  ++   + ++Q  N++       ++
Sbjct: 185 EGKDIYDFIGSTVAKRTFDYFEQVLYEQTINSMKHDAMTTLMEKVQVENSK------LKQ 244

Query: 154 DINALRSELKELSANNAQLSTTVSNLSTSVTVLTSLVIAQFEMMRQIAARHDKQFRTQME 213
            +   + ++ ++ AN  QLS+TVSN       LT +VI  FEM  ++  + DKQF+  +E
Sbjct: 245 LLTEQQKQVAKIMANQDQLSSTVSN-------LTCVVIMNFEMTWKMGVQRDKQFKASIE 304

Query: 214 YMYAAIVQRVPAPIIPPDLETPFPPL--MRLGDPAPRQDN 252
           Y +A   QR+P+P I P++E+ +P +  + LG P P QDN
Sbjct: 305 YTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYPDPHQDN 331

BLAST of PI0021929 vs. ExPASy TrEMBL
Match: A0A5A7VF20 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00430 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 5.0e-12
Identity = 58/185 (31.35%), Postives = 99/185 (53.51%), Query Frame = 0

Query: 77  TASSAHTTTAQPPTVPE--------EDDDLGELLSSLVCKPVFDYFDQVLAHQADHATQL 136
           TA  A  T++ P    +        E  D+ + + S V K  FDYF+QVL  Q  ++ + 
Sbjct: 240 TAKKASETSSSPSKERDLKESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQTINSMKH 299

Query: 137 QSLQNTVNQLQRPNAENLVTPASQEDINALRSELKELSANNAQLSTTVSNLSTSVTVLTS 196
            ++   + ++Q  N++       ++ +   + ++ ++ AN  QLS+TVSN       LT 
Sbjct: 300 DAMTTLMEKVQVENSK------LKQLLTEQQKQVAKIMANQDQLSSTVSN-------LTC 359

Query: 197 LVIAQFEMMRQIAARHDKQFRTQMEYMYAAIVQRVPAPIIPPDLETPFPPL--MRLGDPA 252
           +VI  FEM  ++  + DKQF+  +EY +A   QR+P+P I P++E+ +P +  + LG P 
Sbjct: 360 VVIMNFEMTWKMGVQRDKQFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYPD 411

BLAST of PI0021929 vs. ExPASy TrEMBL
Match: A0A5D3CT45 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G001110 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-05
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 0

Query: 185 VLTSLVIAQFEMMRQIAARHDKQFRTQMEYMYAAIVQRVPAPIIPPDLETPFPPLMRL-G 244
           ++T   +   EM  ++  R D++F+  MEY +A  VQRVP P+IP +LETPFPP+ +  G
Sbjct: 134 LITVNQLLALEMQVKMGERRDRKFQASMEYTHAIFVQRVPQPVIPQELETPFPPIHQAPG 193

Query: 245 DPAPRQDN 252
            P PRQ++
Sbjct: 194 TPKPRQED 201

BLAST of PI0021929 vs. ExPASy TrEMBL
Match: A0A5A7UH00 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G001880 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 8.5e-04
Identity = 36/100 (36.00%), Postives = 52/100 (52.00%), Query Frame = 0

Query: 153 EDINALRSELKELSANNAQLSTTVSNLSTSVTVLTSLVIAQFEMMRQIAARHDKQFRTQM 212
           ED N  R+         + L+  V  L    TV  +         + +  R D++F+  M
Sbjct: 48  EDGNKSRTPPPLKRNAKSTLTPPVKKLKVDATVEKASASKPPHSKKVMGERRDRKFQASM 107

Query: 213 EYMYAAIVQRVPAPIIPPDLETPFPPLMRL-GDPAPRQDN 252
           EY +A  VQRVP P+IP +LETPFPP+ +  G P PRQ++
Sbjct: 108 EYTHAIFVQRVPQPVIPQELETPFPPIHQAPGTPKPRQED 147

BLAST of PI0021929 vs. NCBI nr
Match: TYK28611.1 (hypothetical protein E5676_scaffold2030G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 6.0e-12
Identity = 53/160 (33.12%), Postives = 91/160 (56.88%), Query Frame = 0

Query: 94  EDDDLGELLSSLVCKPVFDYFDQVLAHQADHATQLQSLQNTVNQLQRPNAENLVTPASQE 153
           E  D+ + + S V K  FDYF+QVL  Q  ++ +  ++   + ++Q  N++       ++
Sbjct: 185 EGKDIYDFIGSTVAKRTFDYFEQVLYEQTINSMKHDAMTTLMEKVQVENSK------LKQ 244

Query: 154 DINALRSELKELSANNAQLSTTVSNLSTSVTVLTSLVIAQFEMMRQIAARHDKQFRTQME 213
            +   + ++ ++ AN  QLS+TVSN       LT +VI  FEM  ++  + DKQF+  +E
Sbjct: 245 LLTEQQKQVAKIMANQDQLSSTVSN-------LTCVVIMNFEMTWKMGVQRDKQFKASIE 304

Query: 214 YMYAAIVQRVPAPIIPPDLETPFPPL--MRLGDPAPRQDN 252
           Y +A   QR+P+P I P++E+ +P +  + LG P P QDN
Sbjct: 305 YTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYPDPHQDN 331

BLAST of PI0021929 vs. NCBI nr
Match: KAA0064129.1 (uncharacterized protein E6C27_scaffold548G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 1.0e-11
Identity = 58/185 (31.35%), Postives = 99/185 (53.51%), Query Frame = 0

Query: 77  TASSAHTTTAQPPTVPE--------EDDDLGELLSSLVCKPVFDYFDQVLAHQADHATQL 136
           TA  A  T++ P    +        E  D+ + + S V K  FDYF+QVL  Q  ++ + 
Sbjct: 240 TAKKASETSSSPSKERDLKESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQTINSMKH 299

Query: 137 QSLQNTVNQLQRPNAENLVTPASQEDINALRSELKELSANNAQLSTTVSNLSTSVTVLTS 196
            ++   + ++Q  N++       ++ +   + ++ ++ AN  QLS+TVSN       LT 
Sbjct: 300 DAMTTLMEKVQVENSK------LKQLLTEQQKQVAKIMANQDQLSSTVSN-------LTC 359

Query: 197 LVIAQFEMMRQIAARHDKQFRTQMEYMYAAIVQRVPAPIIPPDLETPFPPL--MRLGDPA 252
           +VI  FEM  ++  + DKQF+  +EY +A   QR+P+P I P++E+ +P +  + LG P 
Sbjct: 360 VVIMNFEMTWKMGVQRDKQFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYPD 411

BLAST of PI0021929 vs. NCBI nr
Match: TYK14602.1 (hypothetical protein E5676_scaffold552G001110 [Cucumis melo var. makuwa])

HSP 1 Score: 59.7 bits (143), Expect = 4.2e-05
Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 0

Query: 185 VLTSLVIAQFEMMRQIAARHDKQFRTQMEYMYAAIVQRVPAPIIPPDLETPFPPLMRL-G 244
           ++T   +   EM  ++  R D++F+  MEY +A  VQRVP P+IP +LETPFPP+ +  G
Sbjct: 134 LITVNQLLALEMQVKMGERRDRKFQASMEYTHAIFVQRVPQPVIPQELETPFPPIHQAPG 193

Query: 245 DPAPRQDN 252
            P PRQ++
Sbjct: 194 TPKPRQED 201

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DYE22.9e-1233.13Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VF205.0e-1231.35Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CT452.0e-0544.12Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UH008.5e-0436.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
TYK28611.16.0e-1233.13hypothetical protein E5676_scaffold2030G00280 [Cucumis melo var. makuwa][more]
KAA0064129.11.0e-1131.35uncharacterized protein E6C27_scaffold548G00430 [Cucumis melo var. makuwa][more]
TYK14602.14.2e-0544.12hypothetical protein E5676_scaffold552G001110 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 155..175

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0021929.1PI0021929.1mRNA