![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
PI0021796 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATATTAACTGCCCAACCCAAAATTTCAAATAACTCAACACTAAAACTGCATTGCAATAATCTTCTAGTAGTGTTACGACAGATTACCTTCATAATTTCTTTCCATCAGTTGTAGTGTAGCAGAAATCATGGAGGACGTTGAAGCGGAATCCAAAGACGAAGCAATGCGATCCAAAACCGCCGTTCGATGTGCAAAAGCAGCTTTTCTACTTTCTTCATTCAAATCCTCCCAAAATCGCCAACTCAGAGCCACTGTCCATGAACAAGCCAAGGTTCTCAAATCACAATTTACGATCACTATATATCTTCCCTAACTTGTCGATATCGCTCTGGTTTATTTACTTGATTCGCGATTTTGATAAATTAAAACGTCGATTACCTTTCAGGAGAGAAAGATACTGAGGAAAACTGTGGGAGATTTGAAGATCCGGTTGACTAAGGAGCGTCTGAGGAATAAGAGGATCAAACTCTGCGGTTTGATGGAATTTGTTCTTCAGCTTCTGCTGGTTATCTCTCTTTCGAGTTTATTCCTTTTTGTTGCCTTCAATTTTGTTTGA ATATTAACTGCCCAACCCAAAATTTCAAATAACTCAACACTAAAACTGCATTGCAATAATCTTCTAGTAGTGTTACGACAGATTACCTTCATAATTTCTTTCCATCAGTTGTAGTGTAGCAGAAATCATGGAGGACGTTGAAGCGGAATCCAAAGACGAAGCAATGCGATCCAAAACCGCCGTTCGATGTGCAAAAGCAGCTTTTCTACTTTCTTCATTCAAATCCTCCCAAAATCGCCAACTCAGAGCCACTGTCCATGAACAAGCCAAGGAGAGAAAGATACTGAGGAAAACTGTGGGAGATTTGAAGATCCGGTTGACTAAGGAGCGTCTGAGGAATAAGAGGATCAAACTCTGCGGTTTGATGGAATTTGTTCTTCAGCTTCTGCTGGTTATCTCTCTTTCGAGTTTATTCCTTTTTGTTGCCTTCAATTTTGTTTGA ATGGAGGACGTTGAAGCGGAATCCAAAGACGAAGCAATGCGATCCAAAACCGCCGTTCGATGTGCAAAAGCAGCTTTTCTACTTTCTTCATTCAAATCCTCCCAAAATCGCCAACTCAGAGCCACTGTCCATGAACAAGCCAAGGAGAGAAAGATACTGAGGAAAACTGTGGGAGATTTGAAGATCCGGTTGACTAAGGAGCGTCTGAGGAATAAGAGGATCAAACTCTGCGGTTTGATGGAATTTGTTCTTCAGCTTCTGCTGGTTATCTCTCTTTCGAGTTTATTCCTTTTTGTTGCCTTCAATTTTGTTTGA MEDVEAESKDEAMRSKTAVRCAKAAFLLSSFKSSQNRQLRATVHEQAKERKILRKTVGDLKIRLTKERLRNKRIKLCGLMEFVLQLLLVISLSSLFLFVAFNFV Homology
BLAST of PI0021796 vs. ExPASy TrEMBL
Match: A0A5D3E7E0 (Putative Retrotransposon-derived protein PEG10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004900 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 3.5e-36 Identity = 94/105 (89.52%), Postives = 99/105 (94.29%), Query Frame = 0
BLAST of PI0021796 vs. ExPASy TrEMBL
Match: A0A0A0LJY1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895820 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 5.6e-34 Identity = 88/102 (86.27%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of PI0021796 vs. ExPASy TrEMBL
Match: A0A6J1FJM5 (uncharacterized protein LOC111445952 OS=Cucurbita moschata OX=3662 GN=LOC111445952 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 5.8e-31 Identity = 83/104 (79.81%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of PI0021796 vs. ExPASy TrEMBL
Match: A0A6J1C920 (uncharacterized protein LOC111009432 OS=Momordica charantia OX=3673 GN=LOC111009432 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 2.4e-29 Identity = 77/101 (76.24%), Postives = 89/101 (88.12%), Query Frame = 0
BLAST of PI0021796 vs. ExPASy TrEMBL
Match: A0A5N6R7K9 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013632 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 9.0e-16 Identity = 48/96 (50.00%), Postives = 76/96 (79.17%), Query Frame = 0
BLAST of PI0021796 vs. NCBI nr
Match: KAA0038606.1 (putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa] >TYK31205.1 putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa]) HSP 1 Score: 160.6 bits (405), Expect = 7.2e-36 Identity = 94/105 (89.52%), Postives = 99/105 (94.29%), Query Frame = 0
BLAST of PI0021796 vs. NCBI nr
Match: XP_011652624.1 (uncharacterized protein LOC105435036 [Cucumis sativus] >KGN60336.1 hypothetical protein Csa_001987 [Cucumis sativus]) HSP 1 Score: 153.3 bits (386), Expect = 1.2e-33 Identity = 88/102 (86.27%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of PI0021796 vs. NCBI nr
Match: XP_022940284.1 (uncharacterized protein LOC111445952 [Cucurbita moschata] >XP_023524781.1 uncharacterized protein LOC111788615 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 143.3 bits (360), Expect = 1.2e-30 Identity = 83/104 (79.81%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of PI0021796 vs. NCBI nr
Match: KAG7031715.1 (hypothetical protein SDJN02_05756, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 141.0 bits (354), Expect = 5.9e-30 Identity = 81/104 (77.88%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of PI0021796 vs. NCBI nr
Match: XP_022138206.1 (uncharacterized protein LOC111009432 [Momordica charantia]) HSP 1 Score: 137.9 bits (346), Expect = 5.0e-29 Identity = 77/101 (76.24%), Postives = 89/101 (88.12%), Query Frame = 0
BLAST of PI0021796 vs. TAIR 10
Match: AT1G78172.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 4.0e-08 Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|