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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTTAAAAGATTTCCTTCGTTCAATCTCCCTAATGCAGAAGAAGCATAACCCCAAAAACTTCCCCCTTCCACCACAAGTCGGAGGCCGCTTCTTCCGACTCAGAAGCATCAAAACCCCAATTACCCCACTAACCAATTCAATTCCATCTCCAAACACCCCAAAAAATATATTTCCTCCAAAATCCAAAAAGAAGCAACCTCAGTTAAGTGTGATCTTTCACCGACAAACCAACATCAGAACAAATCCACTGCAAAACAGCAACCACAACAAGCAGATCAAAGCTGAATCAGTAAAAGATCTCTGA mRNA sequence ATGTTAAAAGATTTCCTTCGTTCAATCTCCCTAATGCAGAAGAAGCATAACCCCAAAAACTTCCCCCTTCCACCACAAGTCGGAGGCCGCTTCTTCCGACTCAGAAGCATCAAAACCCCAATTACCCCACTAACCAATTCAATTCCATCTCCAAACACCCCAAAAAATATATTTCCTCCAAAATCCAAAAAGAAGCAACCTCAGTTAAGTGTGATCTTTCACCGACAAACCAACATCAGAACAAATCCACTGCAAAACAGCAACCACAACAAGCAGATCAAAGCTGAATCAGTAAAAGATCTCTGA Coding sequence (CDS) ATGTTAAAAGATTTCCTTCGTTCAATCTCCCTAATGCAGAAGAAGCATAACCCCAAAAACTTCCCCCTTCCACCACAAGTCGGAGGCCGCTTCTTCCGACTCAGAAGCATCAAAACCCCAATTACCCCACTAACCAATTCAATTCCATCTCCAAACACCCCAAAAAATATATTTCCTCCAAAATCCAAAAAGAAGCAACCTCAGTTAAGTGTGATCTTTCACCGACAAACCAACATCAGAACAAATCCACTGCAAAACAGCAACCACAACAAGCAGATCAAAGCTGAATCAGTAAAAGATCTCTGA Protein sequence MLKDFLRSISLMQKKHNPKNFPLPPQVGGRFFRLRSIKTPITPLTNSIPSPNTPKNIFPPKSKKKQPQLSVIFHRQTNIRTNPLQNSNHNKQIKAESVKDL
Homology
BLAST of PI0021782 vs. ExPASy TrEMBL
Match: A0A0A0L0I9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361840 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41 Identity = 89/101 (88.12%), Postives = 92/101 (91.09%), Query Frame = 0
Query: 1 MLKDFLRSISLMQKKHNPKNFPLPPQVGGRFFRLRSIKTPITPLTNSIPSPNTPKNIFPP 60
MLKDFLRSISLMQKK NPKNF LPPQVGGRFFRLRS+KTP TPL NSIPSP TPK +FPP
Sbjct: 20 MLKDFLRSISLMQKKQNPKNFHLPPQVGGRFFRLRSMKTPTTPLPNSIPSPKTPKKLFPP 79
Query: 61 KSKKKQPQLSVIFHRQTNIRTNPLQNSNHNKQIKAESVKDL 102
KSKKKQPQLSVIFHRQTNI+TNPLQNSN KQIK ESVKDL
Sbjct: 80 KSKKKQPQLSVIFHRQTNIKTNPLQNSNQKKQIKVESVKDL 120
BLAST of PI0021782 vs. NCBI nr
Match: KGN54549.1 (hypothetical protein Csa_012358 [Cucumis sativus]) HSP 1 Score: 178.7 bits (452), Expect = 2.5e-41 Identity = 89/101 (88.12%), Postives = 92/101 (91.09%), Query Frame = 0
Query: 1 MLKDFLRSISLMQKKHNPKNFPLPPQVGGRFFRLRSIKTPITPLTNSIPSPNTPKNIFPP 60
MLKDFLRSISLMQKK NPKNF LPPQVGGRFFRLRS+KTP TPL NSIPSP TPK +FPP
Sbjct: 20 MLKDFLRSISLMQKKQNPKNFHLPPQVGGRFFRLRSMKTPTTPLPNSIPSPKTPKKLFPP 79
Query: 61 KSKKKQPQLSVIFHRQTNIRTNPLQNSNHNKQIKAESVKDL 102
KSKKKQPQLSVIFHRQTNI+TNPLQNSN KQIK ESVKDL
Sbjct: 80 KSKKKQPQLSVIFHRQTNIKTNPLQNSNQKKQIKVESVKDL 120
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L0I9 | 1.2e-41 | 88.12 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361840 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN54549.1 | 2.5e-41 | 88.12 | hypothetical protein Csa_012358 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 69..92 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 42..101 |
Relationships
The following mRNA feature(s) are a part of this gene:
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