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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGATTCTTCCATCTCTTTTTGGAAGGACTTCTGGCTCAATTGTGGTACTCTATCCTCTGCTTTCCCTCGCCTTTTTTGTTTGGCTCGCTATCCGGATATTAGGGTGGCTGATGTTTGGGTGGAGGATGCTGCTGCTTGGGATTTGCATCTTCGCCACAATCTCAATGATTCTGAAATGATCGAATGGATGGCCTTATCACAGCATTTACAGTCTGTCAATTTTCATGCTGCTGCTGATTCTTGGATTTGGACGATCAACCCCTCATCTTTCTTCTCTGTCAAGTCTCTTATGGATGATTTGGTGGGAGCTGATAATATCCATGTTGTGA mRNA sequence ATGATTCTTCCATCTCTTTTTGGAAGGACTTCTGGCTCAATTGTGGTACTCTATCCTCTGCTTTCCCTCGCCTTTTTTGTTTGGCTCGCTATCCGGATATTAGGGTGGCTGATGTTTGGGTGGAGGATGCTGCTCATTTACAGTCTGTCAATTTTCATGCTGCTGCTGATTCTTGGATTTGGACGATCAACCCCTCATCTTTCTTCTCTGTCAAGTCTCTTATGGATGATTTGGTGGGAGCTGATAATATCCATGTTGTGA Coding sequence (CDS) ATGATTCTTCCATCTCTTTTTGGAAGGACTTCTGGCTCAATTGTGGTACTCTATCCTCTGCTTTCCCTCGCCTTTTTTGTTTGGCTCGCTATCCGGATATTAGGGTGGCTGATGTTTGGGTGGAGGATGCTGCTCATTTACAGTCTGTCAATTTTCATGCTGCTGCTGATTCTTGGATTTGGACGATCAACCCCTCATCTTTCTTCTCTGTCAAGTCTCTTATGGATGATTTGGTGGGAGCTGATAATATCCATGTTGTGA Protein sequence MILPSLFGRTSGSIVVLYPLLSLAFFVWLAIRILGWLMFGWRMLLIYSLSIFMLLLILGFGRSTPHLSSLSSLLWMIWWELIISML
Homology
BLAST of PI0021769 vs. ExPASy TrEMBL
Match: A0A0A0LC89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239300 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.3e-23 Identity = 71/109 (65.14%), Postives = 78/109 (71.56%), Query Frame = 0
Query: 1 MILPSLFGRTSGSIVVLYPLLSLAFFVWLAIRILGWLMFGWRMLL--------------- 60
MILPSLFGRTS SIVVLY LLS AFFVWL I+ILGWLMFGWRMLL
Sbjct: 1 MILPSLFGRTSSSIVVLYHLLSPAFFVWLTIQILGWLMFGWRMLLLGICTFAAISMIPKL 60
Query: 61 --------IYSLSIFMLLLILGFGRSTPHLSSLSSLLWMIWWELIISML 87
IYSLSIF+L+LI G+GRS PHL SLS+LL MIWWEL+I+ML
Sbjct: 61 SIGWPYHNIYSLSIFVLMLIFGYGRSNPHLPSLSNLLTMIWWELVIAML 109
BLAST of PI0021769 vs. NCBI nr
Match: KGN57666.1 (hypothetical protein Csa_009495 [Cucumis sativus]) HSP 1 Score: 118.6 bits (296), Expect = 2.6e-23 Identity = 71/109 (65.14%), Postives = 78/109 (71.56%), Query Frame = 0
Query: 1 MILPSLFGRTSGSIVVLYPLLSLAFFVWLAIRILGWLMFGWRMLL--------------- 60
MILPSLFGRTS SIVVLY LLS AFFVWL I+ILGWLMFGWRMLL
Sbjct: 1 MILPSLFGRTSSSIVVLYHLLSPAFFVWLTIQILGWLMFGWRMLLLGICTFAAISMIPKL 60
Query: 61 --------IYSLSIFMLLLILGFGRSTPHLSSLSSLLWMIWWELIISML 87
IYSLSIF+L+LI G+GRS PHL SLS+LL MIWWEL+I+ML
Sbjct: 61 SIGWPYHNIYSLSIFVLMLIFGYGRSNPHLPSLSNLLTMIWWELVIAML 109
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LC89 | 1.3e-23 | 65.14 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239300 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN57666.1 | 2.6e-23 | 65.14 | hypothetical protein Csa_009495 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016020 |
membrane |
|
