PI0021673 (gene) Melon (PI 482460) v1

Overview


Name	PI0021673
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	NAC domain protein
Location	chr04: 26690541 .. 26691089 (-)
RNA-Seq Expression	PI0021673
Synteny	PI0021673

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTATCAATTTTAATTATTCAAAAATTAAAGAAAAAACATGCCGACCATTTTTCAGTCCCAACCCCCGCCTCGCCGGAGCGCCTCTGTTGCTGGAAGAGAAGCTGGCCGGACCCGTGCCGTTAGATCCACTTGCAGGAGCTTTAGTTTTGGTGGGATGGTTAGAGGCGGCCGGAATCTGATGGCCCTTCCTGGAGATAGGTGCCGCCGGAATCAGGGAAGCAGAGAGGTTTTAAGAAGGGCTTTGATGCCCCCAAGCCGGAGACCCAGTCTCCGGTGGATGAATTTCCGGCCAACTCCCAGTCGTCTTTCGATTATGTCTATGGCGTAAAGTTAATTGACTACTTTTGTTTTGTGGGATTATTCTTTGATTCTTATTCAACAAATTTCTAGGATTTTTTTTTGTATATTTGGAGAATCTATGGATGGTTCAGTTCCTAATTTTTTGAGTTAAATTTCGGAATTCTTTGTGGGTTTGTTTATTAACTGTTCATCAATTTTTTGGTGTGTAATGCTTGACCAAAGACTTATATGAAAGTGAAACCAAAT

mRNA sequence

CCCTTATCAATTTTAATTATTCAAAAATTAAAGAAAAAACATGCCGACCATTTTTCAGTCCCAACCCCCGCCTCGCCGGAGCGCCTCTGTTGCTGGAAGAGAAGCTGGCCGGACCCGTGCCGTTAGATCCACTTGCAGGAGCTTTAGTTTTGGTGGGATGGTTAGAGGCGGCCGGAATCTGATGGCCCTTCCTGGAGATAGGTGCCGCCGGAATCAGGGAAGCAGAGAGGTTTTAAGAAGGGCTTTGATGCCCCCAAGCCGGAGACCCAGTCTCCGGTGGATGAATTTCCGGCCAACTCCCAGTCGTCTTTCGATTATGTCTATGGCGTAAAGTTAATTGACTACTTTTGTTTTGTGGGATTATTCTTTGATTCTTATTCAACAAATTTCTAGGATTTTTTTTTGTATATTTGGAGAATCTATGGATGGTTCAGTTCCTAATTTTTTGAGTTAAATTTCGGAATTCTTTGTGGGTTTGTTTATTAACTGTTCATCAATTTTTTGGTGTGTAATGCTTGACCAAAGACTTATATGAAAGTGAAACCAAAT

Coding sequence (CDS)

ATGCCGACCATTTTTCAGTCCCAACCCCCGCCTCGCCGGAGCGCCTCTGTTGCTGGAAGAGAAGCTGGCCGGACCCGTGCCGTTAGATCCACTTGCAGGAGCTTTAGTTTTGGTGGGATGGTTAGAGGCGGCCGGAATCTGATGGCCCTTCCTGGAGATAGGTGCCGCCGGAATCAGGGAAGCAGAGAGGTTTTAAGAAGGGCTTTGATGCCCCCAAGCCGGAGACCCAGTCTCCGGTGGATGAATTTCCGGCCAACTCCCAGTCGTCTTTCGATTATGTCTATGGCGTAA

Protein sequence

MPTIFQSQPPPRRSASVAGREAGRTRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSIMSMA

Homology

[Close]

BLAST of PI0021673 vs. ExPASy TrEMBL
Match: A0A5A7T5L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002460 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.7e-43
Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MPTIFQSQPPPRRSASVAGREAGRTRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQG 60
          MPTIFQSQPPPRRS SVAGREAGRTRAVRSTCRS SFGGMVRGGRNLMALPGDRCRRNQG
Sbjct: 1  MPTIFQSQPPPRRSPSVAGREAGRTRAVRSTCRSLSFGGMVRGGRNLMALPGDRCRRNQG 60

Query: 61 SREVLRRALMPPSRRPSLRWMNFRPTPSRLSIMSMA 97
          SREVLRRALMPPSRRP+LRWMNFRPTPSRLS+MSMA
Sbjct: 61 SREVLRRALMPPSRRPTLRWMNFRPTPSRLSMMSMA 96

[Close]

BLAST of PI0021673 vs. ExPASy TrEMBL
Match: A0A0A0LD23 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G852440 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.9e-43
Identity = 91/96 (94.79%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MPTIFQSQPPPRRSASVAGREAGRTRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQG 60
          MPTIFQSQPPPRR+ SVAGRE GR RAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQG
Sbjct: 1  MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQG 60

Query: 61 SREVLRRALMPPSRRPSLRWMNFRPTPSRLSIMSMA 97
          SREVLRRALMPPSRRP+LRWMNFRPTPSRLSIMSMA
Sbjct: 61 SREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMA 96

[Close]

BLAST of PI0021673 vs. ExPASy TrEMBL
Match: A0A4U5P590 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000228140 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.2e-11
Identity = 47/95 (49.47%), Postives = 59/95 (62.11%), Query Frame = 0


Query: 8   QPPPRRSASVAGR------EAGRTRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQGS 67
           QPP R+S     R      EA  +   RSTC   +  G VR  ++   +P D+ RRNQ +
Sbjct: 14  QPPARQSLGEGNRVRRNNQEASISPRPRSTCTCSNRPGSVRCSKHGYLVPSDKLRRNQAN 73

Query: 68  REVLRRALMPPSRRPSLRWMNFRPTPSRLSIMSMA 97
            E+LRRAL PP+RR +LRW NF+PTPSRLS MSMA
Sbjct: 74  TEILRRALAPPNRRLTLRWFNFQPTPSRLSNMSMA 108

[Close]

BLAST of PI0021673 vs. ExPASy TrEMBL
Match: B9N1L2 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G404500 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11
Identity = 50/108 (46.30%), Postives = 61/108 (56.48%), Query Frame = 0


Query: 1   MPTIFQSQ-----PPPRRSASVAGREAGRTRAV-------RSTCRSFSFGGMVRGGRNLM 60
           M TI Q Q      PP R +   G    R   V       RSTC   +  G VR  ++  
Sbjct: 1   METISQKQTRGRLQPPARQSLGEGNRVRRNNQVASISPRPRSTCTCSNRPGSVRCSKHGY 60

Query: 61  ALPGDRCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSIMSMA 97
            +P D+ RRNQ + E+LRRAL PP+RR +LRW NF+PTPSRLS MSMA
Sbjct: 61  LVPSDKLRRNQANTEILRRALAPPNRRLTLRWFNFQPTPSRLSNMSMA 108

[Close]

BLAST of PI0021673 vs. ExPASy TrEMBL
Match: A0A6N2MHB8 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS358945 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11
Identity = 51/108 (47.22%), Postives = 62/108 (57.41%), Query Frame = 0


Query: 1   MPTIFQSQ-----PPPRRSASVAGREAGRTRAV-------RSTCRSFSFGGMVRGGRNLM 60
           M TI Q Q     P P R +   G  A R           RSTC   +  G VR  ++  
Sbjct: 1   METISQKQTIRRLPIPARQSPGEGIRARRNNQAASISPGPRSTCTCSNRPGSVRCSKHGY 60

Query: 61  ALPGDRCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSIMSMA 97
            +P DR RR+Q +RE+LRRAL PP+RR +LRW NF+PTPSRLS MSMA
Sbjct: 61  LVPSDRLRRHQANREILRRALAPPNRRLTLRWFNFQPTPSRLSNMSMA 108

[Close]

BLAST of PI0021673 vs. NCBI nr
Match: KAA0036871.1 (uncharacterized protein E6C27_scaffold20G001820 [Cucumis melo var. makuwa] >TYJ95931.1 uncharacterized protein E5676_scaffold110G002460 [Cucumis melo var. makuwa])

HSP 1 Score: 184.1 bits (466), Expect = 5.6e-43
Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MPTIFQSQPPPRRSASVAGREAGRTRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQG 60
          MPTIFQSQPPPRRS SVAGREAGRTRAVRSTCRS SFGGMVRGGRNLMALPGDRCRRNQG
Sbjct: 1  MPTIFQSQPPPRRSPSVAGREAGRTRAVRSTCRSLSFGGMVRGGRNLMALPGDRCRRNQG 60

Query: 61 SREVLRRALMPPSRRPSLRWMNFRPTPSRLSIMSMA 97
          SREVLRRALMPPSRRP+LRWMNFRPTPSRLS+MSMA
Sbjct: 61 SREVLRRALMPPSRRPTLRWMNFRPTPSRLSMMSMA 96

[Close]

BLAST of PI0021673 vs. NCBI nr
Match: KGN60027.2 (hypothetical protein Csa_001878 [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 1.6e-42
Identity = 91/96 (94.79%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MPTIFQSQPPPRRSASVAGREAGRTRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQG 60
          MPTIFQSQPPPRR+ SVAGRE GR RAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQG
Sbjct: 1  MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQG 60

Query: 61 SREVLRRALMPPSRRPSLRWMNFRPTPSRLSIMSMA 97
          SREVLRRALMPPSRRP+LRWMNFRPTPSRLSIMSMA
Sbjct: 61 SREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMA 96

[Close]

BLAST of PI0021673 vs. NCBI nr
Match: XP_011652880.1 (uncharacterized protein LOC105435142 [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 1.6e-42
Identity = 91/96 (94.79%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MPTIFQSQPPPRRSASVAGREAGRTRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQG 60
          MPTIFQSQPPPRR+ SVAGRE GR RAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQG
Sbjct: 1  MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQG 60

Query: 61 SREVLRRALMPPSRRPSLRWMNFRPTPSRLSIMSMA 97
          SREVLRRALMPPSRRP+LRWMNFRPTPSRLSIMSMA
Sbjct: 61 SREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMA 96

[Close]

BLAST of PI0021673 vs. NCBI nr
Match: KAG7024857.1 (hypothetical protein SDJN02_13676, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 133.7 bits (335), Expect = 8.7e-28
Identity = 71/99 (71.72%), Postives = 81/99 (81.82%), Query Frame = 0


Query: 1  MPTIFQSQPPPRRS---ASVAGREAGRTRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRR 60
          MPTIFQSQP P R    A+ AGRE   +R++RSTCRSFSF GMVR GRN+M   GD+ RR
Sbjct: 1  MPTIFQSQPQPDRRPSLAAAAGREP--SRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRR 60

Query: 61 NQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSIMSMA 97
          NQG REVLRRALMPP+R+P+LRW+NFRPTPSRLS MSMA
Sbjct: 61 NQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMA 97

[Close]

BLAST of PI0021673 vs. NCBI nr
Match: KAG6607862.1 (hypothetical protein SDJN03_01204, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037392.1 hypothetical protein SDJN02_01017, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 118.6 bits (296), Expect = 2.9e-23
Identity = 66/98 (67.35%), Postives = 76/98 (77.55%), Query Frame = 0


Query: 1  MPTIFQSQPPPRRSASVAG--REAGRTRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRN 60
          MPTIFQSQ  P    S AG  RE GR+R++RS CRS SFGG+ RGGRN+ A  GD+ RR 
Sbjct: 1  MPTIFQSQQQPASRPSHAGAVREGGRSRSLRSNCRSLSFGGVGRGGRNVTA-AGDKLRRL 60

Query: 61 QGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSIMSMA 97
          QG RE+LRRAL PP+RRP+LRW+NFR TPSRLS MSMA
Sbjct: 61 QGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA 97

[Close]

BLAST of PI0021673 vs. TAIR 10
Match: AT3G15518.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 1.5e-09
Identity = 40/89 (44.94%), Postives = 49/89 (55.06%), Query Frame = 0


Query: 11  PRRSAS--VAGREAGRTRAVRSTCRSFSFGGMVRGGRNLMALPGDR---CRRNQGSREVL 70
           P RS +  +  R  G    VR  C      G  +  R+   +P D     + + GSREVL
Sbjct: 16  PGRSETNRIRRRSHGSGLRVRVACTCSGRPGSTKCARHGFVVPSDERLMRKASDGSREVL 75

Query: 71  RRALMPPSRRPSLRWMNFRPTPSRLSIMS 95
           RRAL PP RR +LRW+NFRPTPSRL  MS
Sbjct: 76  RRALTPPIRRMNLRWLNFRPTPSRLCKMS 104

The following BLAST results are available for this feature:

BLAST of PI0021673 vs.


Match Name	E-value	Identity	Description

BLAST of PI0021673 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T5L7	2.7e-43	95.83	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LD23	7.9e-43	94.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G852440 PE=4 SV=1	[more]
A0A4U5P590	1.2e-11	49.47	Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000228140 PE=4 SV=1	[more]
B9N1L2	2.8e-11	46.30	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G404500 PE=4 ...	[more]
A0A6N2MHB8	2.8e-11	47.22	Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS358945 PE=4 SV=...	[more]

BLAST of PI0021673 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036871.1	5.6e-43	95.83	uncharacterized protein E6C27_scaffold20G001820 [Cucumis melo var. makuwa] >TYJ9...	[more]
KGN60027.2	1.6e-42	94.79	hypothetical protein Csa_001878 [Cucumis sativus]	[more]
XP_011652880.1	1.6e-42	94.79	uncharacterized protein LOC105435142 [Cucumis sativus]	[more]
KAG7024857.1	8.7e-28	71.72	hypothetical protein SDJN02_13676, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6607862.1	2.9e-23	67.35	hypothetical protein SDJN03_01204, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of PI0021673 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15518.1	1.5e-09	44.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021673.1	PI0021673.1	mRNA