PI0021542 (gene) Melon (PI 482460) v1

Overview


Name	PI0021542
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	40S ribosomal protein SA
Location	chr03: 23018342 .. 23021043 (+)
RNA-Seq Expression	PI0021542
Synteny	PI0021542

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAATATTAGTCTTCCTCTTAACCCTCTTCAGTTGCAGTCGCCGAAGAGCTCCAAATCCTCTTTTTATTCACTTAATCGATTCCCAGATTCCGCCATGGCGACCGGAGCTGCACCGCCGCGTCAACTCTCACAGAAGGAAGCCGACATTCAGATGATGTTGGCTGCCGAAGTTCATCTTGGAACAAAAAACTGCGATTTCCAAATGGAACGATACGTTTTTAAGCGCCGAAATGATGGTATGTTTCCTTTAGATCTTCCTTGGTTTGTTGCTCCAAGTTTTGTTTTCTGTTTTTTCCTTTTTATCGGCGATTTTCGCTTTGACTGATATTTAAAGTGCTAATGGGCGTGTTGTTATTCTTCTTAAATTTCTTTTTCAAGAATTCCTCGACTTTGTTGTGATTGGAATCATATTTATTTTTAGTTGTGAAGTTCCAGTCTTTGGCTATTCTTCTGTTTATATCTTTAAAATTTTCTTCATTTTCTTCATTTTCTGAGGAATTTTCTCCAAATTCTTAAAACAGCATTAAGTACTTTTGATGCTGTTTTGAGTTTTGTCGCTGAATGTTGATTAACACGATTTCGAATGCTTTCCTTAAAAGGAGGGTTCAATGGGGATTGTCTATACAATGTGTTGATGTTAGGTTATTTAAATTGTTGAGTTATGGTTGTGTATGATTTTTCTTTATTAAAAGTCTTACTTTGTTATTAGGAATCTACATCATTAACCTTGGTAAAACATGGGAGAAACTTCAGCTGGCTGCAAGAGTTATTGTGGGTATCGAGAATCCTCAAGATATCATTGTTCAGTCTGCTCGACCCTATGGTCAGAGGGCTGTTTTGAAGTTTGCTCAGCACACTGGTGCTCATGCTATTGCTGGGAGGCACACTCCTGGAACATTCACCAACCAGCTTCAGACATCATTCAACGAGCCACGCCTTCTTATACTTACTGATCCTAGAACTGATCATCAGGTGTTTAATTTAGAAATCAAGAACAGTTCATGTTTTTAAATTTATCTCCAAGAAGAATGGTGGCTTTATATTGTCAATTATGATTCAATTCATGTCTGTTCCATAGATTTATTTGTGTTTGGATTCACTTGATGCTTTTATTTATTGATGTCGCCTTGTTGATTCTGACTTGCAGCCCATTAAGGAAGCTGCACTTGGTAACATTCCCACAATAGCTTTTTGTGACACTGATTCTCCAATGCGGTATGTTGATATTGGAATCCCGGCTAACAACAAGGGGAAACATAGCATAGGATGTTTGTTCTGGCTTTTGGCAAGGATGGTTCTACAAATGCGTGGGACAATTCGTGCTGGCCACAAATGGGATGTTATGGTAAAAGATCTTATTGCAATTTTCTATTAGTACTTTAGAAACTTCATTTGGACTTAGTTTTCGATTGAAAATTATTTGTGGGAACTGTTTCCTTGTGTAGGTGGATTTGTTTTTCTATCGTGAACCTGAGGAGGCTAAGGAGCCAGAAGAGGAAGAGGCTCCTCCACCCGCAGATTTTGGCATTGCTGACTATAGTGCTGCTCCACTTGCCTCAGATCAATGGACTTCACAAATTCCTGATGCCCAATGGGGTGCTGCAGATGCAATTCCTCCTCCTGCTGCTGTACCTGCTTCCAGTGCCGAATGGGCTCCAGAGCCAGGTTGAATATAAGCTTTTGTTTTAATTTGTTTATTTGAATAGAACTATCTGCCCTTTGGTATGTTTATTCATGTAAACTTGTTTTTGGTCTCTTTGGATAACTGTTTCCTCTTAGGCTAGATAAGTCAGTTTGTCTGCTTTCCATATGAAGTTTCTGATTATTACTTTACATACCTAATATGCCAAACAATCCTGTTCTTTTCATTACATTGTTTTTGCATCTTTAGACATCCTTTACCAGGAGTTGTAACATGCAACTGATTAGTTATGTTGTGATTGTCTGAGGTGAACTGAAGAAAATGATAGTGTTTGTAGATTTAAGACTATAATTCTTAGACTATATTTGAGTCATTAAACATGGTAAAAGTGGTTTTAAATGGATAAAAGTATTCCTTAACCAACTAATATTGATGCTTCTACAATTTAATACTTCCATAAAAGCAATTGATAGCTTGCTTAGTTAAGTGCTTTGGCTTGTTTCTTATAACACATCATTTTTTATCTCTTGTAACATTAATTTTATTTTCCTACTTCTACATGTATTTGTACGAACTTTCTCACCATTGTTTTCCTTTGTTGCCAGTTGCTTTGGCAGCTGATGGATGGGACGCCGCAGCAGCACCACCTCCACCGCCGGCAGCTTCTGCTGACGGCACGACACCTTCCTCCGCCAGTTGGTTTTAAGAGAGAAAAAGTTAAAGTTCCGTAACGAATTGTACTCAAATGGATTAATTATTATGAGTTTTCTTGTTTATTTAGGAATGACATCCGTCTTTTTTGGTTGGAAAATCGACTCAATTATTTTTTTTATAGTCCAGTTTTAGATTTTAAGATTGATTTTCCGACTTCCATATTACATAACTTAAGGTCCAATCTTTCTTTTATTTTTTTTTTTGTTTTTGAGATATATGAGAAATTAAGTCGCAACAAATAATTATATTAATTTTTTATGGCTGAAGGTGGCATATTTTCGTTGAAAGTTTTGGTGGAAGTGAGTGAGCATAACAAGAAGAGTTGATGATAGTCGTTTATTTTA

mRNA sequence

ATAAATATTAGTCTTCCTCTTAACCCTCTTCAGTTGCAGTCGCCGAAGAGCTCCAAATCCTCTTTTTATTCACTTAATCGATTCCCAGATTCCGCCATGGCGACCGGAGCTGCACCGCCGCGTCAACTCTCACAGAAGGAAGCCGACATTCAGATGATGTTGGCTGCCGAAGTTCATCTTGGAACAAAAAACTGCGATTTCCAAATGGAACGATACGTTTTTAAGCGCCGAAATGATGGAATCTACATCATTAACCTTGGTAAAACATGGGAGAAACTTCAGCTGGCTGCAAGAGTTATTGTGGGTATCGAGAATCCTCAAGATATCATTGTTCAGTCTGCTCGACCCTATGGTCAGAGGGCTGTTTTGAAGTTTGCTCAGCACACTGGTGCTCATGCTATTGCTGGGAGGCACACTCCTGGAACATTCACCAACCAGCTTCAGACATCATTCAACGAGCCACGCCTTCTTATACTTACTGATCCTAGAACTGATCATCAGCCCATTAAGGAAGCTGCACTTGGTAACATTCCCACAATAGCTTTTTGTGACACTGATTCTCCAATGCGGTATGTTGATATTGGAATCCCGGCTAACAACAAGGGGAAACATAGCATAGGATGTTTGTTCTGGCTTTTGGCAAGGATGGTTCTACAAATGCGTGGGACAATTCGTGCTGGCCACAAATGGGATGTTATGGTGGATTTGTTTTTCTATCGTGAACCTGAGGAGGCTAAGGAGCCAGAAGAGGAAGAGGCTCCTCCACCCGCAGATTTTGGCATTGCTGACTATAGTGCTGCTCCACTTGCCTCAGATCAATGGACTTCACAAATTCCTGATGCCCAATGGGGTGCTGCAGATGCAATTCCTCCTCCTGCTGCTGTACCTGCTTCCAGTGCCGAATGGGCTCCAGAGCCAGTTGCTTTGGCAGCTGATGGATGGGACGCCGCAGCAGCACCACCTCCACCGCCGGCAGCTTCTGCTGACGGCACGACACCTTCCTCCGCCAGTTGGTTTTAAGAGAGAAAAAGTTAAAGTTCCGTAACGAATTGTACTCAAATGGATTAATTATTATGAGTTTTCTTGTTTATTTAGGAATGACATCCGTCTTTTTTGGTTGGAAAATCGACTCAATTATTTTTTTTATAGTCCAGTTTTAGATTTTAAGATTGATTTTCCGACTTCCATATTACATAACTTAAGGTCCAATCTTTCTTTTATTTTTTTTTTTGTTTTTGAGATATATGAGAAATTAAGTCGCAACAAATAATTATATTAATTTTTTATGGCTGAAGGTGGCATATTTTCGTTGAAAGTTTTGGTGGAAGTGAGTGAGCATAACAAGAAGAGTTGATGATAGTCGTTTATTTTA

Coding sequence (CDS)

ATGGCGACCGGAGCTGCACCGCCGCGTCAACTCTCACAGAAGGAAGCCGACATTCAGATGATGTTGGCTGCCGAAGTTCATCTTGGAACAAAAAACTGCGATTTCCAAATGGAACGATACGTTTTTAAGCGCCGAAATGATGGAATCTACATCATTAACCTTGGTAAAACATGGGAGAAACTTCAGCTGGCTGCAAGAGTTATTGTGGGTATCGAGAATCCTCAAGATATCATTGTTCAGTCTGCTCGACCCTATGGTCAGAGGGCTGTTTTGAAGTTTGCTCAGCACACTGGTGCTCATGCTATTGCTGGGAGGCACACTCCTGGAACATTCACCAACCAGCTTCAGACATCATTCAACGAGCCACGCCTTCTTATACTTACTGATCCTAGAACTGATCATCAGCCCATTAAGGAAGCTGCACTTGGTAACATTCCCACAATAGCTTTTTGTGACACTGATTCTCCAATGCGGTATGTTGATATTGGAATCCCGGCTAACAACAAGGGGAAACATAGCATAGGATGTTTGTTCTGGCTTTTGGCAAGGATGGTTCTACAAATGCGTGGGACAATTCGTGCTGGCCACAAATGGGATGTTATGGTGGATTTGTTTTTCTATCGTGAACCTGAGGAGGCTAAGGAGCCAGAAGAGGAAGAGGCTCCTCCACCCGCAGATTTTGGCATTGCTGACTATAGTGCTGCTCCACTTGCCTCAGATCAATGGACTTCACAAATTCCTGATGCCCAATGGGGTGCTGCAGATGCAATTCCTCCTCCTGCTGCTGTACCTGCTTCCAGTGCCGAATGGGCTCCAGAGCCAGTTGCTTTGGCAGCTGATGGATGGGACGCCGCAGCAGCACCACCTCCACCGCCGGCAGCTTCTGCTGACGGCACGACACCTTCCTCCGCCAGTTGGTTTTAA

Protein sequence

MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFGIADYSAAPLASDQWTSQIPDAQWGAADAIPPPAAVPASSAEWAPEPVALAADGWDAAAAPPPPPAASADGTTPSSASWF

Homology

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BLAST of PI0021542 vs. ExPASy Swiss-Prot
Match: O80377 (40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 1.6e-126
Identity = 240/307 (78.18%), Postives = 258/307 (84.04%), Query Frame = 0


Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MA+GA   R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MASGA---RELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           L LAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+
Sbjct: 61  LMLAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFGIADYSAAPL-AS 240
           LARMVLQMRG I  GHKW+VMVDLFFYREPEE K+ EEE+  P  D+ +ADY+AAP+  +
Sbjct: 181 LARMVLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEEDL-PVGDY-VADYAAAPIGGA 240

Query: 241 DQWTSQIPDAQWGAADAIPPPAAVPASSAEWAPEPVALAADGWDAAAAPPPPPAASADGT 300
           DQW + IPDAQWG     P  +AVPA +  W  +   +A DGWDAAAAPP P A   D  
Sbjct: 241 DQWNA-IPDAQWGGDVVQPANSAVPAGT--WT-DAGPIAGDGWDAAAAPPVPGAVGLD-- 296

Query: 301 TPSSASW 307
            P+   W
Sbjct: 301 VPAPTGW 296

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BLAST of PI0021542 vs. ExPASy Swiss-Prot
Match: O22518 (40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 1.8e-125
Identity = 239/303 (78.88%), Postives = 253/303 (83.50%), Query Frame = 0


Query: 5   AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 64
           AAPPRQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQLA
Sbjct: 9   AAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQLA 68

Query: 65  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 124
           ARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+EPRL
Sbjct: 69  ARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRL 128

Query: 125 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 184
           LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 129 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 188

Query: 185 VLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFGIADYSAAPLASD-QWT 244
           VLQMRGTIR G KWDVMVDLFFYREPEEAK+ EEEEA P  D+ I D++A  +A+D QW 
Sbjct: 189 VLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEA-PAVDYAITDFNAGAIAADGQWP 248

Query: 245 SQIPDAQWGAADAIPPP-AAVPASSAEWAPEPVALAADGWDAAAAPP---PPPAASADGT 303
             I D  W  +DA+P P  AVP  +     E  A A   W  A  PP   P P +  D  
Sbjct: 249 GTI-DQSW--SDAVPQPIPAVPGVNWGAPAEAPAAAGGDWGEAVPPPQQIPVPPSGIDTV 307

[Close]

BLAST of PI0021542 vs. ExPASy Swiss-Prot
Match: A5BUU4 (40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 2.3e-125
Identity = 241/313 (77.00%), Postives = 251/313 (80.19%), Query Frame = 0


Query: 5   AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 64
           A P R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLA
Sbjct: 2   ATPTRALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLA 61

Query: 65  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 124
           ARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+EPRL
Sbjct: 62  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRL 121

Query: 125 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 184
           LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 122 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 181

Query: 185 VLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFGIADYSAAP---LASDQ 244
           VLQMR TI  GHKWDVMVDLFFYREPEE KE E +E     D+GI DY A     L    
Sbjct: 182 VLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLGGGD 241

Query: 245 WTSQIPDA-QWGA-ADAIPPPAAVPASS---AEWAPEPVALAADGWDAAAAPP---PPPA 304
           W + I DA QWGA   A+ P  AVP S+   A   P  V +A DGWDAAAAPP   PPP 
Sbjct: 242 WGAPITDAPQWGADVPAVAPIPAVPGSNWGDAAPMPSAVPIATDGWDAAAAPPVAVPPPV 301

Query: 305 ASADGTTPSSASW 307
                  P  A W
Sbjct: 302 VEG---VPPPAGW 311

[Close]

BLAST of PI0021542 vs. ExPASy Swiss-Prot
Match: O65751 (40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 2.0e-121
Identity = 234/308 (75.97%), Postives = 255/308 (82.79%), Query Frame = 0


Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MAT  AP RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+K
Sbjct: 1   MATTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           L LAAR+IV IEN QDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+
Sbjct: 61  LNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFGIADYSAAPLASD 240
           LARMVLQMRGTIR G KWDVMVDLFFYREPEEAK+PEE+E   P D+ IAD++ + + SD
Sbjct: 181 LARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDEVAAP-DYAIADFNVSAIPSD 240

Query: 241 -QWTSQIPDAQWGAADAIPPP-AAVPASSAEWAPEPVALAADGWDAAAAPPPPPAASADG 300
            QW + I D  W   DA+P P  AVPA    WA  P A+A D W   A PPP    +A  
Sbjct: 241 GQWPAAI-DQPWN--DAVPQPIPAVPA--VNWA-APEAVAGD-W-GEAVPPPQQIPTAGI 299

Query: 301 TTPSSASW 307
            +  +  W
Sbjct: 301 ESVPATGW 299

[Close]

BLAST of PI0021542 vs. ExPASy Swiss-Prot
Match: Q08682 (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3)

HSP 1 Score: 431.0 bits (1107), Expect = 1.1e-119
Identity = 225/297 (75.76%), Postives = 248/297 (83.50%), Query Frame = 0


Query: 1   MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFG-IADYSAAPLA 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K  +E+EA P A++G +       + 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-TSQIPDAQWGAADAIPPPAAVPASSAEWAPEPVALAADGWDAAAAPPPPPAA 295
            DQW T+QIPDA W   +   P +A PA +A W+    A A  GW+AAA P   PAA
Sbjct: 241 GDQWTTAQIPDAAW-PGEGQAPISAAPA-AASWSDSAAAPADGGWEAAAPPSGAPAA 295

[Close]

BLAST of PI0021542 vs. ExPASy TrEMBL
Match: A0A5D3DUK0 (40S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00510 PE=3 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 8.7e-168
Identity = 300/308 (97.40%), Postives = 302/308 (98.05%), Query Frame = 0


Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFGIADYSAAPLASD 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEA PPADFGIADYSAAPLASD
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLASD 240

Query: 241 QWTSQIPDAQWGAADAIPPPAA-VPASSAEWAPEPVALAADGWDAAAAPPPPPAASADGT 300
           QWTSQIPDAQWGAADA+PPPAA VPAS AEWAPEPVAL ADGWD AAAPPPPPAASADGT
Sbjct: 241 QWTSQIPDAQWGAADALPPPAAVVPASGAEWAPEPVALTADGWD-AAAPPPPPAASADGT 300

Query: 301 TPSSASWF 308
            P+SASWF
Sbjct: 301 APASASWF 307

[Close]

BLAST of PI0021542 vs. ExPASy TrEMBL
Match: A0A1S3CJX7 (40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103501303 PE=3 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 8.7e-168
Identity = 300/308 (97.40%), Postives = 302/308 (98.05%), Query Frame = 0


Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFGIADYSAAPLASD 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEA PPADFGIADYSAAPLASD
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLASD 240

Query: 241 QWTSQIPDAQWGAADAIPPPAA-VPASSAEWAPEPVALAADGWDAAAAPPPPPAASADGT 300
           QWTSQIPDAQWGAADA+PPPAA VPAS AEWAPEPVAL ADGWD AAAPPPPPAASADGT
Sbjct: 241 QWTSQIPDAQWGAADALPPPAAVVPASGAEWAPEPVALTADGWD-AAAPPPPPAASADGT 300

Query: 301 TPSSASWF 308
            P+SASWF
Sbjct: 301 APASASWF 307

[Close]

BLAST of PI0021542 vs. ExPASy TrEMBL
Match: A0A0A0K8X1 (40S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_6G016990 PE=3 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 1.1e-167
Identity = 299/308 (97.08%), Postives = 300/308 (97.40%), Query Frame = 0


Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFGIADYSAAPLASD 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEA PPADFGIADYSAAPL SD
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD 240

Query: 241 QWTSQIPDAQWGAADAIPPPA-AVPASSAEWAPEPVALAADGWDAAAAPPPPPAASADGT 300
           QWTSQIPDAQWGAADAIP PA  VPAS AEWAPEPVALAADGWDAAAAPPPPPA SA+GT
Sbjct: 241 QWTSQIPDAQWGAADAIPSPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT 300

Query: 301 TPSSASWF 308
            PSSASWF
Sbjct: 301 APSSASWF 308

[Close]

BLAST of PI0021542 vs. ExPASy TrEMBL
Match: A0A6J1I7P9 (40S ribosomal protein SA OS=Cucurbita maxima OX=3661 GN=LOC111472042 PE=3 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 1.0e-152
Identity = 275/308 (89.29%), Postives = 283/308 (91.88%), Query Frame = 0


Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAP RQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           L +AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TG HAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFGIADYSAAPL-AS 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE EEEEA PP DFGIADY AAPL AS
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVAS 240

Query: 241 DQWTSQIPDAQWGAADAIPPPAAVPASSAEWAPEPVALAADGWDAAAAPPPPPAASADGT 300
           DQW +QI DAQWGAAD +P PAA  ASS EWAPEPV LAA+ W+AA APPPP   +ADG 
Sbjct: 241 DQWAAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADGA 300

Query: 301 TPSSASWF 308
            PSSASWF
Sbjct: 301 APSSASWF 308

[Close]

BLAST of PI0021542 vs. ExPASy TrEMBL
Match: A0A6J1EC15 (40S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111432696 PE=3 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 1.0e-152
Identity = 275/308 (89.29%), Postives = 283/308 (91.88%), Query Frame = 0


Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAP RQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           L +AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TG HAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFGIADYSAAPL-AS 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE EEEEA PP DFGIADY AAPL AS
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVAS 240

Query: 241 DQWTSQIPDAQWGAADAIPPPAAVPASSAEWAPEPVALAADGWDAAAAPPPPPAASADGT 300
           DQW +QI DAQWGAAD +P PAA  ASS EWAPEPV LAA+ W+AA APPPP   +ADG 
Sbjct: 241 DQWAAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADGA 300

Query: 301 TPSSASWF 308
            PSSASWF
Sbjct: 301 APSSASWF 308

[Close]

BLAST of PI0021542 vs. NCBI nr
Match: XP_008463065.1 (PREDICTED: 40S ribosomal protein SA-like [Cucumis melo] >KAA0039133.1 40S ribosomal protein SA-like [Cucumis melo var. makuwa] >TYK26980.1 40S ribosomal protein SA-like [Cucumis melo var. makuwa])

HSP 1 Score: 599.4 bits (1544), Expect = 1.8e-167
Identity = 300/308 (97.40%), Postives = 302/308 (98.05%), Query Frame = 0


Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFGIADYSAAPLASD 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEA PPADFGIADYSAAPLASD
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLASD 240

Query: 241 QWTSQIPDAQWGAADAIPPPAA-VPASSAEWAPEPVALAADGWDAAAAPPPPPAASADGT 300
           QWTSQIPDAQWGAADA+PPPAA VPAS AEWAPEPVAL ADGWD AAAPPPPPAASADGT
Sbjct: 241 QWTSQIPDAQWGAADALPPPAAVVPASGAEWAPEPVALTADGWD-AAAPPPPPAASADGT 300

Query: 301 TPSSASWF 308
            P+SASWF
Sbjct: 301 APASASWF 307

[Close]

BLAST of PI0021542 vs. NCBI nr
Match: XP_004138372.1 (40S ribosomal protein SA [Cucumis sativus] >KGN45883.1 hypothetical protein Csa_005754 [Cucumis sativus])

HSP 1 Score: 599.0 bits (1543), Expect = 2.3e-167
Identity = 299/308 (97.08%), Postives = 300/308 (97.40%), Query Frame = 0


Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFGIADYSAAPLASD 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEA PPADFGIADYSAAPL SD
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD 240

Query: 241 QWTSQIPDAQWGAADAIPPPA-AVPASSAEWAPEPVALAADGWDAAAAPPPPPAASADGT 300
           QWTSQIPDAQWGAADAIP PA  VPAS AEWAPEPVALAADGWDAAAAPPPPPA SA+GT
Sbjct: 241 QWTSQIPDAQWGAADAIPSPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT 300

Query: 301 TPSSASWF 308
            PSSASWF
Sbjct: 301 APSSASWF 308

[Close]

BLAST of PI0021542 vs. NCBI nr
Match: XP_038886558.1 (40S ribosomal protein SA-like [Benincasa hispida])

HSP 1 Score: 553.9 bits (1426), Expect = 8.7e-154
Identity = 280/310 (90.32%), Postives = 286/310 (92.26%), Query Frame = 0


Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQL+QKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLAQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFGIADYSAAPL-AS 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEA PP DFGIADY AAPL  +
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPPDFGIADYGAAPLVGA 240

Query: 241 DQWTSQIPDAQWGAADAIPPPAAVPASSAEWAPEPVALAADGWDAAAAPPPPP--AASAD 300
           DQWT+QIPDAQWGA DA+P  A  PAS+ EWA EPVALAADGWDAA  P P    A +A 
Sbjct: 241 DQWTAQIPDAQWGAGDAVPAAAVPPASNVEWAQEPVALAADGWDAAVPPVPAADGAVAAA 300

Query: 301 GTTPSSASWF 308
              PSSASWF
Sbjct: 301 PPPPSSASWF 310

[Close]

BLAST of PI0021542 vs. NCBI nr
Match: XP_022925394.1 (40S ribosomal protein SA-like [Cucurbita moschata] >XP_022973502.1 40S ribosomal protein SA-like [Cucurbita maxima] >XP_023535006.1 40S ribosomal protein SA-like [Cucurbita pepo subsp. pepo] >KAG6592327.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025148.1 40S ribosomal protein SA [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 549.3 bits (1414), Expect = 2.1e-152
Identity = 275/308 (89.29%), Postives = 283/308 (91.88%), Query Frame = 0


Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAP RQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPARQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           L +AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TG HAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LYMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGTHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFGIADYSAAPL-AS 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE EEEEA PP DFGIADY AAPL AS
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVAS 240

Query: 241 DQWTSQIPDAQWGAADAIPPPAAVPASSAEWAPEPVALAADGWDAAAAPPPPPAASADGT 300
           DQW +QI DAQWGAAD +P PAA  ASS EWAPEPV LAA+ W+AA APPPP   +ADG 
Sbjct: 241 DQWAAQISDAQWGAADVVPAPAAPAASSVEWAPEPVPLAANEWEAAVAPPPPAPPAADGA 300

Query: 301 TPSSASWF 308
            PSSASWF
Sbjct: 301 APSSASWF 308

[Close]

BLAST of PI0021542 vs. NCBI nr
Match: XP_022932088.1 (40S ribosomal protein SA-like [Cucurbita moschata] >KAG7037204.1 40S ribosomal protein SA [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 538.5 bits (1386), Expect = 3.8e-149
Identity = 273/312 (87.50%), Postives = 280/312 (89.74%), Query Frame = 0


Query: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFGIADYSAAPL-AS 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE EEEEA PP DFGIADY AAPL AS
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEEALPPPDFGIADYGAAPLVAS 240

Query: 241 DQWTSQIPDAQWGAADAIPPPAAV----PASSAEWAPEPVALAADGWDAAAAPPPPPAAS 300
           DQW++QIPDAQWGAAD + P AA     P SS EW  EP ALAADGWDAA APP    A 
Sbjct: 241 DQWSAQIPDAQWGAADVVVPAAAAAAIPPPSSVEWTSEPAALAADGWDAAVAPPLSAPAV 300

Query: 301 ADGTTPSSASWF 308
                PS+  W+
Sbjct: 301 DGAAPPSNGGWY 312

[Close]

BLAST of PI0021542 vs. TAIR 10
Match: AT1G72370.1 (40s ribosomal protein SA )

HSP 1 Score: 431.0 bits (1107), Expect = 7.9e-121
Identity = 225/297 (75.76%), Postives = 248/297 (83.50%), Query Frame = 0


Query: 1   MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFG-IADYSAAPLA 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K  +E+EA P A++G +       + 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-TSQIPDAQWGAADAIPPPAAVPASSAEWAPEPVALAADGWDAAAAPPPPPAA 295
            DQW T+QIPDA W   +   P +A PA +A W+    A A  GW+AAA P   PAA
Sbjct: 241 GDQWTTAQIPDAAW-PGEGQAPISAAPA-AASWSDSAAAPADGGWEAAAPPSGAPAA 295

[Close]

BLAST of PI0021542 vs. TAIR 10
Match: AT1G72370.2 (40s ribosomal protein SA )

HSP 1 Score: 426.0 bits (1094), Expect = 2.5e-119
Identity = 224/297 (75.42%), Postives = 247/297 (83.16%), Query Frame = 0


Query: 1   MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFG-IADYSAAPLA 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K  +E+EA P A++G +       + 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-TSQIPDAQWGAADAIPPPAAVPASSAEWAPEPVALAADGWDAAAAPPPPPAA 295
            DQW T+QIPDA W   +   P +A PA +A W+      A  GW+AAA P   PAA
Sbjct: 241 GDQWTTAQIPDAAW-PGEGQAPISAAPA-AASWSDS----ADGGWEAAAPPSGAPAA 291

[Close]

BLAST of PI0021542 vs. TAIR 10
Match: AT3G04770.2 (40s ribosomal protein SA B )

HSP 1 Score: 411.4 bits (1056), Expect = 6.5e-115
Identity = 212/285 (74.39%), Postives = 239/285 (83.86%), Query Frame = 0


Query: 5   AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 64
           A   RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+A
Sbjct: 7   ATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMA 66

Query: 65  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 124
           ARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAGRHTPGTFTNQ+QTSF+EPRL
Sbjct: 67  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRL 126

Query: 125 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 184
           LILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 127 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARM 186

Query: 185 VLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEAPPPADFGIADYSAAPLASDQW-T 244
           VLQMRGTI A  KWDVMVDLFFYREPEEAK+  +EEA   AD+G+       +  DQW T
Sbjct: 187 VLQMRGTILAAQKWDVMVDLFFYREPEEAKQEGDEEAEVQADYGM-------VGGDQWTT 246

Query: 245 SQIPDAQWGAADAIPPPAAVPASSAEWAPEPVALAADGWDAAAAP 289
           +QI DA W + +   P +A PA         V +AA GW+AA+ P
Sbjct: 247 AQISDAAW-SGEVEQPISAAPAVG-------VTVAA-GWEAASVP 275

[Close]

BLAST of PI0021542 vs. TAIR 10
Match: AT3G04770.1 (40s ribosomal protein SA B )

HSP 1 Score: 365.2 bits (936), Expect = 5.3e-101
Identity = 173/199 (86.93%), Postives = 189/199 (94.97%), Query Frame = 0


Query: 5   AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 64
           A   RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+A
Sbjct: 7   ATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMA 66

Query: 65  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 124
           ARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAGRHTPGTFTNQ+QTSF+EPRL
Sbjct: 67  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRL 126

Query: 125 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 184
           LILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 127 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARM 186

Query: 185 VLQMRGTIRAGHKWDVMVD 204
           VLQMRGTI A  KWDVMV+
Sbjct: 187 VLQMRGTILAAQKWDVMVN 205

The following BLAST results are available for this feature:

BLAST of PI0021542 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80377	1.6e-126	78.18	40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1	[more]
O22518	1.8e-125	78.88	40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1	[more]
A5BUU4	2.3e-125	77.00	40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV...	[more]
O65751	2.0e-121	75.97	40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1	[more]
Q08682	1.1e-119	75.76	40S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3	[more]

BLAST of PI0021542 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DUK0	8.7e-168	97.40	40S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CJX7	8.7e-168	97.40	40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103501303 PE=3 SV=1	[more]
A0A0A0K8X1	1.1e-167	97.08	40S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_6G016990 PE=3 SV=1	[more]
A0A6J1I7P9	1.0e-152	89.29	40S ribosomal protein SA OS=Cucurbita maxima OX=3661 GN=LOC111472042 PE=3 SV=1	[more]
A0A6J1EC15	1.0e-152	89.29	40S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111432696 PE=3 SV=1	[more]

BLAST of PI0021542 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463065.1	1.8e-167	97.40	PREDICTED: 40S ribosomal protein SA-like [Cucumis melo] >KAA0039133.1 40S riboso...	[more]
XP_004138372.1	2.3e-167	97.08	40S ribosomal protein SA [Cucumis sativus] >KGN45883.1 hypothetical protein Csa_...	[more]
XP_038886558.1	8.7e-154	90.32	40S ribosomal protein SA-like [Benincasa hispida]	[more]
XP_022925394.1	2.1e-152	89.29	40S ribosomal protein SA-like [Cucurbita moschata] >XP_022973502.1 40S ribosomal...	[more]
XP_022932088.1	3.8e-149	87.50	40S ribosomal protein SA-like [Cucurbita moschata] >KAG7037204.1 40S ribosomal p...	[more]

BLAST of PI0021542 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72370.1	7.9e-121	75.76	40s ribosomal protein SA	[more]
AT1G72370.2	2.5e-119	75.42	40s ribosomal protein SA	[more]
AT3G04770.2	6.5e-115	74.39	40s ribosomal protein SA B	[more]
AT3G04770.1	5.3e-101	86.93	40s ribosomal protein SA B	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001865	Ribosomal protein S2	PRINTS	PR00395	RIBOSOMALS2	coord: 122..139 score: 44.62 coord: 139..150 score: 51.15 coord: 97..114 score: 47.01 coord: 48..57 score: 64.92 coord: 18..36 score: 36.11 coord: 160..174 score: 53.64
IPR001865	Ribosomal protein S2	PFAM	PF00318	Ribosomal_S2	coord: 120..185 e-value: 5.0E-12 score: 45.5 coord: 21..114 e-value: 3.2E-13 score: 49.5
IPR001865	Ribosomal protein S2	CDD	cd01425	RPS2	coord: 21..187 e-value: 2.43552E-73 score: 222.072
IPR005707	Ribosomal protein S2, eukaryotic/archaeal	TIGRFAM	TIGR01012	TIGR01012	coord: 13..209 e-value: 4.5E-96 score: 318.0
IPR005707	Ribosomal protein S2, eukaryotic/archaeal	PANTHER	PTHR11489	40S RIBOSOMAL PROTEIN SA	coord: 10..294
None	No IPR available	GENE3D	3.40.50.10490		coord: 17..222 e-value: 3.8E-104 score: 348.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..307
None	No IPR available	PANTHER	PTHR11489:SF25	40S RIBOSOMAL PROTEIN SA	coord: 10..294
IPR018130	Ribosomal protein S2, conserved site	PROSITE	PS00963	RIBOSOMAL_S2_2	coord: 122..146
IPR018130	Ribosomal protein S2, conserved site	PROSITE	PS00962	RIBOSOMAL_S2_1	coord: 18..29
IPR027498	Ribosomal protein S2, eukaryotic	HAMAP	MF_03015	Ribosomal_S2_euk	coord: 5..273 score: 50.537365
IPR023591	Ribosomal protein S2, flavodoxin-like domain superfamily	SUPERFAMILY	52313	Ribosomal protein S2	coord: 13..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021542.1	PI0021542.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome