PI0021412 (gene) Melon (PI 482460) v1

Overview


Name	PI0021412
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Methyltransferase-related protein
Location	chr12: 24589157 .. 24589508 (+)
RNA-Seq Expression	PI0021412
Synteny	PI0021412

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACTCTTGCCGGCTTCTTCCTTATCCGTAACCTCAAATCTCCCTCTCAAGATTTCCACGCCGACGACCATACTTCCGATTCCAATTCCTCTTCATCCCCCAAGTCCAACAAGGTCCTTCTTCTTCTTCTAATACAATTCTTCTTTAATTTCTTCCATCTCAATCAAATCTTTCTTTCATTAATTGGTGTGTACGTGTGTTGTATATATGTTTGAACAGATCTCATCGGGGTTCTGGACGGTGGTAGATATGGCTTCCGGTCGCTACTTATGGAGACATTTGTTTTCGTCGTCGTCGGAGAAGCCTTCCGATTGA

mRNA sequence

ATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACTCTTGCCGGCTTCTTCCTTATCCGTAACCTCAAATCTCCCTCTCAAGATTTCCACGCCGACGACCATACTTCCGATTCCAATTCCTCTTCATCCCCCAAGTCCAACAAGATCTCATCGGGGTTCTGGACGGTGGTAGATATGGCTTCCGGTCGCTACTTATGGAGACATTTGTTTTCGTCGTCGTCGGAGAAGCCTTCCGATTGA

Coding sequence (CDS)

ATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACTCTTGCCGGCTTCTTCCTTATCCGTAACCTCAAATCTCCCTCTCAAGATTTCCACGCCGACGACCATACTTCCGATTCCAATTCCTCTTCATCCCCCAAGTCCAACAAGATCTCATCGGGGTTCTGGACGGTGGTAGATATGGCTTCCGGTCGCTACTTATGGAGACATTTGTTTTCGTCGTCGTCGGAGAAGCCTTCCGATTGA

Protein sequence

MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHADDHTSDSNSSSSPKSNKISSGFWTVVDMASGRYLWRHLFSSSSEKPSD

Homology

[Close]

BLAST of PI0021412 vs. ExPASy TrEMBL
Match: A0A5A7V291 (Putative Methyltransferase-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00570 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.0e-34
Identity = 78/81 (96.30%), Postives = 78/81 (96.30%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHADDHTSDSNSSSSPKSNKISSGFWTVVD 60
          MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHA DHTSDSNSSSSP SNKISSGFWTVVD
Sbjct: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTSDSNSSSSPNSNKISSGFWTVVD 60

Query: 61 MASGRYLWRHLFSSSSEKPSD 82
          MASGRYLWRHLFSSSSEK SD
Sbjct: 61 MASGRYLWRHLFSSSSEKASD 81

[Close]

BLAST of PI0021412 vs. ExPASy TrEMBL
Match: A0A0A0LVB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533620 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-31
Identity = 76/82 (92.68%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHADDHTSDSNSSSSPKSNKISSGFWTVVD 60
          MCPLR ILIFLSATLAGF LIRNLKSPSQDFHADDHT DSNSSSSP SNKISSGFWTVVD
Sbjct: 1  MCPLRLILIFLSATLAGFVLIRNLKSPSQDFHADDHTFDSNSSSSPNSNKISSGFWTVVD 60

Query: 61 MASGRYLWRHLF-SSSSEKPSD 82
          MASGRYLWRHLF SSSSEK SD
Sbjct: 61 MASGRYLWRHLFSSSSSEKASD 82

[Close]

BLAST of PI0021412 vs. ExPASy TrEMBL
Match: A0A1S3BWD8 (uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.9e-22
Identity = 62/85 (72.94%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHADDHTSDS----NSSSSPKSNKISSGFW 60
          MCPLRFILIFLSATLAGFF++RNLKS  QDF A D++ DS    +SS S   +K+SSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60

Query: 61 TVVDMASGRYLWRHLFSSSSEKPSD 82
          TVVDMASGRYLWRHLF  SS+KPSD
Sbjct: 61 TVVDMASGRYLWRHLF-PSSKKPSD 84

[Close]

BLAST of PI0021412 vs. ExPASy TrEMBL
Match: A0A6J1DPZ0 (uncharacterized protein LOC111022014 OS=Momordica charantia OX=3673 GN=LOC111022014 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.0e-22
Identity = 63/88 (71.59%), Postives = 71/88 (80.68%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHADDHTSDSNSS------SSPKSNKISSG 60
          MCPLRFILIFLSATLAGFF++RNLKS  QDF A D  SD++S+      SS  ++K+SSG
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEAADDNSDAHSNDSSAAHSSNSTSKVSSG 60

Query: 61 FWTVVDMASGRYLWRHLF-SSSSEKPSD 82
          FWTVVDMASGRYLWRHLF SSSS K SD
Sbjct: 61 FWTVVDMASGRYLWRHLFPSSSSPKRSD 88

[Close]

BLAST of PI0021412 vs. ExPASy TrEMBL
Match: A0A0A0LV42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 8.5e-22
Identity = 59/85 (69.41%), Postives = 72/85 (84.71%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDF----HADDHTSDSNSSSSPKSNKISSGFW 60
          MCPLRFILIFLSATLAGFF++RNLKS  QDF    ++DD++++ +SS S   +K+SSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSNEFDSSDSSSCSKVSSGFW 60

Query: 61 TVVDMASGRYLWRHLFSSSSEKPSD 82
          T+VDMASGRYLWRHLF  SS+KPSD
Sbjct: 61 TLVDMASGRYLWRHLF-PSSKKPSD 84

[Close]

BLAST of PI0021412 vs. NCBI nr
Match: KAA0060005.1 (putative Methyltransferase-related protein [Cucumis melo var. makuwa] >TYJ97263.1 putative Methyltransferase-related protein [Cucumis melo var. makuwa])

HSP 1 Score: 154.5 bits (389), Expect = 4.0e-34
Identity = 78/81 (96.30%), Postives = 78/81 (96.30%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHADDHTSDSNSSSSPKSNKISSGFWTVVD 60
          MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHA DHTSDSNSSSSP SNKISSGFWTVVD
Sbjct: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHAQDHTSDSNSSSSPNSNKISSGFWTVVD 60

Query: 61 MASGRYLWRHLFSSSSEKPSD 82
          MASGRYLWRHLFSSSSEK SD
Sbjct: 61 MASGRYLWRHLFSSSSEKASD 81

[Close]

BLAST of PI0021412 vs. NCBI nr
Match: KGN65855.1 (hypothetical protein Csa_023267 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 3.2e-31
Identity = 76/82 (92.68%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHADDHTSDSNSSSSPKSNKISSGFWTVVD 60
          MCPLR ILIFLSATLAGF LIRNLKSPSQDFHADDHT DSNSSSSP SNKISSGFWTVVD
Sbjct: 1  MCPLRLILIFLSATLAGFVLIRNLKSPSQDFHADDHTFDSNSSSSPNSNKISSGFWTVVD 60

Query: 61 MASGRYLWRHLF-SSSSEKPSD 82
          MASGRYLWRHLF SSSSEK SD
Sbjct: 61 MASGRYLWRHLFSSSSSEKASD 82

[Close]

BLAST of PI0021412 vs. NCBI nr
Match: XP_038895770.1 (uncharacterized protein LOC120083933 [Benincasa hispida])

HSP 1 Score: 127.5 bits (319), Expect = 5.3e-26
Identity = 71/87 (81.61%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHADDHTS------DSNSSSSPKSNKISSG 60
          MCPLRFILIFLSATLAGFFL+RNLKSPSQDF ADD++       DSNSSSS  S+K+SSG
Sbjct: 1  MCPLRFILIFLSATLAGFFLLRNLKSPSQDFQADDNSDSHSKDLDSNSSSS-SSSKLSSG 60

Query: 61 FWTVVDMASGRYLWRHLFSSSSEKPSD 82
          FWTVVDMASGRYLWRHLF SSSEKPSD
Sbjct: 61 FWTVVDMASGRYLWRHLF-SSSEKPSD 85

[Close]

BLAST of PI0021412 vs. NCBI nr
Match: XP_008453499.1 (PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo])

HSP 1 Score: 114.0 bits (284), Expect = 6.0e-22
Identity = 62/85 (72.94%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHADDHTSDS----NSSSSPKSNKISSGFW 60
          MCPLRFILIFLSATLAGFF++RNLKS  QDF A D++ DS    +SS S   +K+SSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60

Query: 61 TVVDMASGRYLWRHLFSSSSEKPSD 82
          TVVDMASGRYLWRHLF  SS+KPSD
Sbjct: 61 TVVDMASGRYLWRHLF-PSSKKPSD 84

[Close]

BLAST of PI0021412 vs. NCBI nr
Match: XP_022154856.1 (uncharacterized protein LOC111022014 [Momordica charantia])

HSP 1 Score: 113.2 bits (282), Expect = 1.0e-21
Identity = 63/88 (71.59%), Postives = 71/88 (80.68%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHADDHTSDSNSS------SSPKSNKISSG 60
          MCPLRFILIFLSATLAGFF++RNLKS  QDF A D  SD++S+      SS  ++K+SSG
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEAADDNSDAHSNDSSAAHSSNSTSKVSSG 60

Query: 61 FWTVVDMASGRYLWRHLF-SSSSEKPSD 82
          FWTVVDMASGRYLWRHLF SSSS K SD
Sbjct: 61 FWTVVDMASGRYLWRHLFPSSSSPKRSD 88

[Close]

BLAST of PI0021412 vs. TAIR 10
Match: AT5G58375.1 (Methyltransferase-related protein )

HSP 1 Score: 77.4 bits (189), Expect = 5.8e-15
Identity = 47/84 (55.95%), Postives = 54/84 (64.29%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQD---------FHADDHTSDSNSSSSPKSNKI 60
          MCPLR ILIFLSATLAGFF+++ L S S D          HADD   DS S  S     +
Sbjct: 1  MCPLRLILIFLSATLAGFFVLQKLNSTSDDPLDDSFTDAEHADD---DSVSGFSKVGMAM 60

Query: 61 SSGFWTVVDMASGRYLWRHLFSSS 76
           SGFWT VDMASGRYLW +L S++
Sbjct: 61 KSGFWTCVDMASGRYLWNNLCSNA 81

[Close]

BLAST of PI0021412 vs. TAIR 10
Match: AT5G18150.1 (Methyltransferase-related protein )

HSP 1 Score: 65.9 bits (159), Expect = 1.8e-11
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHADDHTSDSNSSSSPKSNKISSGFWTVVD 60
          MCP+RF+L+F SA LAG+F  + + S S +F + D  ++    +  K  K+ +GFW  VD
Sbjct: 1  MCPMRFLLVFFSAVLAGYFAWKTVSS-SPEFDSPDELNEKQELNLKK--KMENGFWVFVD 60

Query: 61 MASGRYLWRHL 72
          MASGRYLWR+L
Sbjct: 61 MASGRYLWRNL 68

[Close]

BLAST of PI0021412 vs. TAIR 10
Match: AT5G14602.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Methyltransferase-related protein (TAIR:AT5G18150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 1.3e-09
Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLIRNLKSPSQDFHADDHTSDSNSSSS-PKSNKISSGFWTVV 60
          MCPLRF+L+F SA LAG+   R + S  + F  +   +++          K+ +G WT V
Sbjct: 1  MCPLRFVLVFFSAVLAGYIAWRTVNSTPELFSDELLQAEAKEKQGLDFKRKMDNGLWTFV 60

Query: 61 DMASGRYLWRHL 72
          DMASGRYLWR+L
Sbjct: 61 DMASGRYLWRNL 72

The following BLAST results are available for this feature:

BLAST of PI0021412 vs.


Match Name	E-value	Identity	Description

BLAST of PI0021412 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V291	2.0e-34	96.30	Putative Methyltransferase-related protein OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0LVB2	1.5e-31	92.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533620 PE=4 SV=1	[more]
A0A1S3BWD8	2.9e-22	72.94	uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=...	[more]
A0A6J1DPZ0	5.0e-22	71.59	uncharacterized protein LOC111022014 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A0A0LV42	8.5e-22	69.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1	[more]

BLAST of PI0021412 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060005.1	4.0e-34	96.30	putative Methyltransferase-related protein [Cucumis melo var. makuwa] >TYJ97263....	[more]
KGN65855.1	3.2e-31	92.68	hypothetical protein Csa_023267 [Cucumis sativus]	[more]
XP_038895770.1	5.3e-26	81.61	uncharacterized protein LOC120083933 [Benincasa hispida]	[more]
XP_008453499.1	6.0e-22	72.94	PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo]	[more]
XP_022154856.1	1.0e-21	71.59	uncharacterized protein LOC111022014 [Momordica charantia]	[more]

BLAST of PI0021412 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58375.1	5.8e-15	55.95	Methyltransferase-related protein	[more]
AT5G18150.1	1.8e-11	47.89	Methyltransferase-related protein	[more]
AT5G14602.1	1.3e-09	44.44	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..51
None	No IPR available	PANTHER	PTHR34132:SF4	EXPRESSED PROTEIN	coord: 1..78
None	No IPR available	PANTHER	PTHR34132	EMB\|CAB87627.1-RELATED	coord: 1..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021412.1	PI0021412.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity