Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTGAATACTCCGTCATTGCCGGGTAGCCAGAGAAGGACCGCGGCGGCTTCTTCAGTCGATTTTCAGATTACCGTTGATGATCAGAAGGAGAGGGTAATGATTTGGATCAAGAAAAGAAAGAGATTTAAAAAACTTCTGCTGTTCCTAAAAGCCAGAAGAGAGTTTCTGGGGCCTTGACTCATAAACGAACAGATATTAAGAACTATGGGGGTGCAGAGCAACGAGTTTACAGTACTGGAAGGTCTGTCAGATTGCTGGAGAAGAACATGGAGAGCTTGAGTTTGGGGGGGATGAGAAAATGGGACCAATTACTGTCCATATGTCGTTCGAGGATATGCCTAGCAGTTCAGGTTTGCATTTTTGTATGTTCTTTACATTGCCACGGCACCACATGCTAATTCTGATGCGAAATGCTTTTGTGAAGATGAAGAACTAAATGAAGCTTCGAAAGATGATGACTCTCTGGCGATTTCTGCTGAAGAAATCAATGGATCTGACAAGTCTTCTCTGCCTACTGAAGACTTGGATGTAACTGAAGTTGTTCACAAATCGAGCATTGCAGAAGAACCTGGTATGGAAGTTGAATCTAAACAAAATGAGTCTACCTGTGAATTGGAACAAGAAGAAGAAAAACACATGAATAATTCTGCTGAAGAACTGTCTCTTCCCCATGAAAATGTGGAAGAAGAAACCGAAATTGATGGAGATGATGGTGTCTTGAGCAGTGATGAATCTTTAATGGAAGTGAAAGACGAACAAGATGAATATGATTACGAATCAGATCCCACAATCGGAGATGAAGCATCAGATGCTGACATTGAAGGAGACAAGAAGGAAACAGAAATGGAGAAAAGTTCGGTTCAAGCTGAAGAAGATGATGCAATAATAATCAAAGTCTGTGGAGGAGCTCCCTGA
mRNA sequence
ATGGCTTTGAATACTCCGTCATTGCCGGGTAGCCAGAGAAGGACCGCGGCGGCTTCTTCAGTCGATTTTCAGATTACCGTTGATGATCAGAAGGAGAGGATTGCTGGAGAAGAACATGGAGAGCTTGAGTTTGGGGGGGATGAGAAAATGGGACCAATTACTGTCCATATGTCGTTCGAGGATATGCCTAGCAGTTCAGATGAAGAACTAAATGAAGCTTCGAAAGATGATGACTCTCTGGCGATTTCTGCTGAAGAAATCAATGGATCTGACAAGTCTTCTCTGCCTACTGAAGACTTGGATGTAACTGAAGTTGTTCACAAATCGAGCATTGCAGAAGAACCTGGTATGGAAGTTGAATCTAAACAAAATGAGTCTACCTGTGAATTGGAACAAGAAGAAGAAAAACACATGAATAATTCTGCTGAAGAACTGTCTCTTCCCCATGAAAATGTGGAAGAAGAAACCGAAATTGATGGAGATGATGGTGTCTTGAGCAGTGATGAATCTTTAATGGAAGTGAAAGACGAACAAGATGAATATGATTACGAATCAGATCCCACAATCGGAGATGAAGCATCAGATGCTGACATTGAAGGAGACAAGAAGGAAACAGAAATGGAGAAAAGTTCGGTTCAAGCTGAAGAAGATGATGCAATAATAATCAAAGTCTGTGGAGGAGCTCCCTGA
Coding sequence (CDS)
ATGGCTTTGAATACTCCGTCATTGCCGGGTAGCCAGAGAAGGACCGCGGCGGCTTCTTCAGTCGATTTTCAGATTACCGTTGATGATCAGAAGGAGAGGATTGCTGGAGAAGAACATGGAGAGCTTGAGTTTGGGGGGGATGAGAAAATGGGACCAATTACTGTCCATATGTCGTTCGAGGATATGCCTAGCAGTTCAGATGAAGAACTAAATGAAGCTTCGAAAGATGATGACTCTCTGGCGATTTCTGCTGAAGAAATCAATGGATCTGACAAGTCTTCTCTGCCTACTGAAGACTTGGATGTAACTGAAGTTGTTCACAAATCGAGCATTGCAGAAGAACCTGGTATGGAAGTTGAATCTAAACAAAATGAGTCTACCTGTGAATTGGAACAAGAAGAAGAAAAACACATGAATAATTCTGCTGAAGAACTGTCTCTTCCCCATGAAAATGTGGAAGAAGAAACCGAAATTGATGGAGATGATGGTGTCTTGAGCAGTGATGAATCTTTAATGGAAGTGAAAGACGAACAAGATGAATATGATTACGAATCAGATCCCACAATCGGAGATGAAGCATCAGATGCTGACATTGAAGGAGACAAGAAGGAAACAGAAATGGAGAAAAGTTCGGTTCAAGCTGAAGAAGATGATGCAATAATAATCAAAGTCTGTGGAGGAGCTCCCTGA
Protein sequence
MALNTPSLPGSQRRTAAASSVDFQITVDDQKERIAGEEHGELEFGGDEKMGPITVHMSFEDMPSSSDEELNEASKDDDSLAISAEEINGSDKSSLPTEDLDVTEVVHKSSIAEEPGMEVESKQNESTCELEQEEEKHMNNSAEELSLPHENVEEETEIDGDDGVLSSDESLMEVKDEQDEYDYESDPTIGDEASDADIEGDKKETEMEKSSVQAEEDDAIIIKVCGGAP
Homology
BLAST of PI0021382 vs. ExPASy TrEMBL
Match:
A0A1S3CT90 (probable beta-tubulin polyglutamylase OS=Cucumis melo OX=3656 GN=LOC103504683 PE=4 SV=1)
HSP 1 Score: 238.4 bits (607), Expect = 2.9e-59
Identity = 181/375 (48.27%), Postives = 199/375 (53.07%), Query Frame = 0
Query: 1 MALNTPSLPGSQRRTAAASS----VDFQITVDDQKE------------------------ 60
MAL TPSLPGS+RRTAAASS VDFQ+TVDDQKE
Sbjct: 109 MALTTPSLPGSRRRTAAASSACKKVDFQMTVDDQKEDNDLDQEKKEIEKTPAVPKSQKRV 168
Query: 61 ----------------------------RIAGEEHGELEFGGDEKMGPITVHMSFEDMPS 120
R+ + L GGDE+M PI+VHMSFEDMP+
Sbjct: 169 VGASTRKRTETRNNGAAEQRVYSTRRSVRLLEKNMESLSLGGDEEMEPISVHMSFEDMPN 228
Query: 121 S----------------------------------------------------------- 180
S
Sbjct: 229 SSVPVKENTELEIESKIIDESESKLDEDLRVEVDDGEKSEIGSEVKLSEEEPEIVLDDLL 288
Query: 181 ------------------------------SDEELNEASKDDDSLAISAEEINGSDKSSL 224
S++++NEASK ++ ISAEEIN SDKSSL
Sbjct: 289 KSSDENVVTAKSVDDSETEALHANLDVKCFSEDKVNEASK---AVEISAEEINESDKSSL 348
BLAST of PI0021382 vs. ExPASy TrEMBL
Match:
A0A5A7UN97 (Putative beta-tubulin polyglutamylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00410 PE=4 SV=1)
HSP 1 Score: 229.9 bits (585), Expect = 1.0e-56
Identity = 176/375 (46.93%), Postives = 196/375 (52.27%), Query Frame = 0
Query: 1 MALNTPSLPGSQRRTAAASS----VDFQITVDDQKE------------------------ 60
MAL TPSLPGS+RRTAAASS VDFQ+T+DDQKE
Sbjct: 109 MALTTPSLPGSRRRTAAASSACKKVDFQMTIDDQKEDNDLDQEKKEIEKTPAVPKSQKRV 168
Query: 61 ----------------------------RIAGEEHGELEFGGDEKMGPITVHMSFEDMPS 120
R+ + L GGDE+M PI+VHMSFEDMP+
Sbjct: 169 VGASTRKRTETKNNGAAEQRVYSTRRSVRLLEKNMESLSLGGDEEMEPISVHMSFEDMPN 228
Query: 121 S----------------------------------------------------------- 180
S
Sbjct: 229 SSVPVKENTKLEIESKIIDESESKLDEDLRVEVDDGEKSEIGSEVKLSEEEPEIVLDDLL 288
Query: 181 ------------------------------SDEELNEASKDDDSLAISAEEINGSDKSSL 224
S++++NEASK ++ ISAEEIN SDKSSL
Sbjct: 289 KSSDENVVTAKSVDDSETEALHANLDVKCFSEDKVNEASK---AVEISAEEINESDKSSL 348
BLAST of PI0021382 vs. ExPASy TrEMBL
Match:
A0A6J1ELB4 (uncharacterized protein LOC111435613 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435613 PE=4 SV=1)
HSP 1 Score: 111.3 bits (277), Expect = 5.4e-21
Identity = 109/269 (40.52%), Postives = 145/269 (53.90%), Query Frame = 0
Query: 4 NTPSLPGSQRRTAAAS-----------SVDFQITVDDQKERIAGEEHGELEFGGDEKMGP 63
NTP++P SQ+R A AS +++ ++ + R+ + L D+KM P
Sbjct: 156 NTPAVPKSQKRVAGASTSKRTQTRNNGAMEPRVYSTRRSVRLLEQTMESLSLAEDKKMEP 215
Query: 64 ITVHMSFEDMPSSS-----------------------DEEL----NEASKDD-------- 123
TVHMSF++MP+SS DE+L NE K++
Sbjct: 216 NTVHMSFDEMPNSSGPVKEETKLEVESKNTDKSESKLDEDLGLKTNEQEKNEMEEPEMDP 275
Query: 124 --------DSLAISAEEINGSDKSSLPTEDLDVTEVVHKSSIAEEPGMEVESKQNESTCE 183
DS+ ISAEEIN DK SL +ED+D+TE VH SSI EE GMEV+SKQNES E
Sbjct: 276 DDSMKRSADSVEISAEEINDFDKLSLHSEDVDLTE-VHHSSIEEESGMEVQSKQNESIFE 335
Query: 184 LEQEEEKHMNNSAEELSLPHENVEEETEIDGDDGVLSS-DESLMEVKDEQDEYDYESDPT 211
LE HMN SAEE SLP ENVEEET++ D VLSS ++S+MEV D++DE +PT
Sbjct: 336 LE-----HMNISAEESSLPIENVEEETQV---DEVLSSVEKSIMEVIDDEDEL----EPT 395
BLAST of PI0021382 vs. ExPASy TrEMBL
Match:
A0A6J1ESK4 (uncharacterized protein LOC111435613 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435613 PE=4 SV=1)
HSP 1 Score: 109.8 bits (273), Expect = 1.6e-20
Identity = 109/273 (39.93%), Postives = 145/273 (53.11%), Query Frame = 0
Query: 4 NTPSLPGSQRRTAAAS-----------SVDFQITVDDQKERIAGEEHGELEFGGDEKMGP 63
NTP++P SQ+R A AS +++ ++ + R+ + L D+KM P
Sbjct: 156 NTPAVPKSQKRVAGASTSKRTQTRNNGAMEPRVYSTRRSVRLLEQTMESLSLAEDKKMEP 215
Query: 64 ITVHMSFEDMPSSS---------------------------DEEL----NEASKDD---- 123
TVHMSF++MP+SS DE+L NE K++
Sbjct: 216 NTVHMSFDEMPNSSAIGAGPVKEETKLEVESKNTDKSESKLDEDLGLKTNEQEKNEMEEP 275
Query: 124 ------------DSLAISAEEINGSDKSSLPTEDLDVTEVVHKSSIAEEPGMEVESKQNE 183
DS+ ISAEEIN DK SL +ED+D+TE VH SSI EE GMEV+SKQNE
Sbjct: 276 EMDPDDSMKRSADSVEISAEEINDFDKLSLHSEDVDLTE-VHHSSIEEESGMEVQSKQNE 335
Query: 184 STCELEQEEEKHMNNSAEELSLPHENVEEETEIDGDDGVLSS-DESLMEVKDEQDEYDYE 211
S ELE HMN SAEE SLP ENVEEET++ D VLSS ++S+MEV D++DE
Sbjct: 336 SIFELE-----HMNISAEESSLPIENVEEETQV---DEVLSSVEKSIMEVIDDEDEL--- 395
BLAST of PI0021382 vs. ExPASy TrEMBL
Match:
A0A6J1HZT2 (uncharacterized protein LOC111469129 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469129 PE=4 SV=1)
HSP 1 Score: 104.4 bits (259), Expect = 6.6e-19
Identity = 117/317 (36.91%), Postives = 148/317 (46.69%), Query Frame = 0
Query: 1 MALNTPSLPGSQRRTAAASS----VDFQITVDDQKE------------------------ 60
+AL TPSL +RRTA ASS VDFQ+ VDD++E
Sbjct: 109 VALTTPSLRSGRRRTAGASSACKKVDFQMAVDDEEEENDLDHEKPVIENTPAAPKSQRSV 168
Query: 61 ----------------------------RIAGEEHGELEFGGDEKMGPITVHMSFEDMPS 120
R+ + L D KM PITVHMSF+++P+
Sbjct: 169 AGPSTSKRTQTRNNGVVEQRVYSTRRSVRLLEQTMESLSLAEDRKMKPITVHMSFDEIPN 228
Query: 121 SS-----------------------DEEL----NEASKDD----------------DSLA 180
SS DE+L NE K++ DS+
Sbjct: 229 SSGPVKEETKLEVESKKTDESESKLDEDLGLETNEQEKNEMEEPQMDPDDSMKCSADSVE 288
Query: 181 ISAEEINGSDKSSLPTEDLDVTEVVHKSSIAEEPGMEVESKQNESTCELEQ--EEEKHMN 217
ISAEEIN SDK SLP+ED+D+TE VH SSI EE GMEV+SK NES LE EE K MN
Sbjct: 289 ISAEEINDSDKLSLPSEDVDLTE-VHHSSIEEESGMEVQSKYNESIFALEHIIEEVKPMN 348
BLAST of PI0021382 vs. NCBI nr
Match:
XP_008467303.1 (PREDICTED: probable beta-tubulin polyglutamylase [Cucumis melo])
HSP 1 Score: 238.4 bits (607), Expect = 6.0e-59
Identity = 181/375 (48.27%), Postives = 199/375 (53.07%), Query Frame = 0
Query: 1 MALNTPSLPGSQRRTAAASS----VDFQITVDDQKE------------------------ 60
MAL TPSLPGS+RRTAAASS VDFQ+TVDDQKE
Sbjct: 109 MALTTPSLPGSRRRTAAASSACKKVDFQMTVDDQKEDNDLDQEKKEIEKTPAVPKSQKRV 168
Query: 61 ----------------------------RIAGEEHGELEFGGDEKMGPITVHMSFEDMPS 120
R+ + L GGDE+M PI+VHMSFEDMP+
Sbjct: 169 VGASTRKRTETRNNGAAEQRVYSTRRSVRLLEKNMESLSLGGDEEMEPISVHMSFEDMPN 228
Query: 121 S----------------------------------------------------------- 180
S
Sbjct: 229 SSVPVKENTELEIESKIIDESESKLDEDLRVEVDDGEKSEIGSEVKLSEEEPEIVLDDLL 288
Query: 181 ------------------------------SDEELNEASKDDDSLAISAEEINGSDKSSL 224
S++++NEASK ++ ISAEEIN SDKSSL
Sbjct: 289 KSSDENVVTAKSVDDSETEALHANLDVKCFSEDKVNEASK---AVEISAEEINESDKSSL 348
BLAST of PI0021382 vs. NCBI nr
Match:
KAA0055115.1 (putative beta-tubulin polyglutamylase [Cucumis melo var. makuwa])
HSP 1 Score: 229.9 bits (585), Expect = 2.1e-56
Identity = 176/375 (46.93%), Postives = 196/375 (52.27%), Query Frame = 0
Query: 1 MALNTPSLPGSQRRTAAASS----VDFQITVDDQKE------------------------ 60
MAL TPSLPGS+RRTAAASS VDFQ+T+DDQKE
Sbjct: 109 MALTTPSLPGSRRRTAAASSACKKVDFQMTIDDQKEDNDLDQEKKEIEKTPAVPKSQKRV 168
Query: 61 ----------------------------RIAGEEHGELEFGGDEKMGPITVHMSFEDMPS 120
R+ + L GGDE+M PI+VHMSFEDMP+
Sbjct: 169 VGASTRKRTETKNNGAAEQRVYSTRRSVRLLEKNMESLSLGGDEEMEPISVHMSFEDMPN 228
Query: 121 S----------------------------------------------------------- 180
S
Sbjct: 229 SSVPVKENTKLEIESKIIDESESKLDEDLRVEVDDGEKSEIGSEVKLSEEEPEIVLDDLL 288
Query: 181 ------------------------------SDEELNEASKDDDSLAISAEEINGSDKSSL 224
S++++NEASK ++ ISAEEIN SDKSSL
Sbjct: 289 KSSDENVVTAKSVDDSETEALHANLDVKCFSEDKVNEASK---AVEISAEEINESDKSSL 348
BLAST of PI0021382 vs. NCBI nr
Match:
XP_011654865.2 (probable serine/threonine-protein kinase kinX isoform X2 [Cucumis sativus] >KAE8647937.1 hypothetical protein Csa_000497 [Cucumis sativus])
HSP 1 Score: 228.4 bits (581), Expect = 6.2e-56
Identity = 179/373 (47.99%), Postives = 199/373 (53.35%), Query Frame = 0
Query: 1 MALNTPSLPGSQRRTAAASS----VDFQITVDDQKE----------------------RI 60
MAL TPSLPGS+RRTAAASS VDFQ+TVDDQKE R+
Sbjct: 109 MALTTPSLPGSRRRTAAASSACKKVDFQMTVDDQKEDKDLDQEKKEIENTPAVPKSQKRV 168
Query: 61 AG-----------------------------EEHGE-LEFGGDEKMGPITVHMSFEDMPS 120
AG E++ E + GGDEKM PITVHMSF+DMP+
Sbjct: 169 AGASTRKRTETKDSGAAEQRVYSTRRSVRLLEKNMESMSLGGDEKMEPITVHMSFDDMPN 228
Query: 121 ------------------------------------------------------------ 180
Sbjct: 229 ISEPVKENMELETESKKTDESVSKLDEDLSVEVDDGEKNEMGTEVKLSEEEPEIVLDDLL 288
Query: 181 ------------------------------SSDEELNEASKDDDSLAISAEEINGSDKSS 222
S DE++NE SKDDDS+ SAEEIN SDKSS
Sbjct: 289 KSFDENVISAKSVDDSITEAPHANSDVKCFSEDEKVNEVSKDDDSVESSAEEINESDKSS 348
BLAST of PI0021382 vs. NCBI nr
Match:
XP_031742149.1 (probable serine/threonine-protein kinase kinX isoform X1 [Cucumis sativus])
HSP 1 Score: 226.9 bits (577), Expect = 1.8e-55
Identity = 179/377 (47.48%), Postives = 199/377 (52.79%), Query Frame = 0
Query: 1 MALNTPSLPGSQRRTAAASS----VDFQITVDDQKE----------------------RI 60
MAL TPSLPGS+RRTAAASS VDFQ+TVDDQKE R+
Sbjct: 109 MALTTPSLPGSRRRTAAASSACKKVDFQMTVDDQKEDKDLDQEKKEIENTPAVPKSQKRV 168
Query: 61 AG-----------------------------EEHGE-LEFGGDEKMGPITVHMSFEDMPS 120
AG E++ E + GGDEKM PITVHMSF+DMP+
Sbjct: 169 AGASTRKRTETKDSGAAEQRVYSTRRSVRLLEKNMESMSLGGDEKMEPITVHMSFDDMPN 228
Query: 121 ------------------------------------------------------------ 180
Sbjct: 229 ISAIGAEPVKENMELETESKKTDESVSKLDEDLSVEVDDGEKNEMGTEVKLSEEEPEIVL 288
Query: 181 ----------------------------------SSDEELNEASKDDDSLAISAEEINGS 222
S DE++NE SKDDDS+ SAEEIN S
Sbjct: 289 DDLLKSFDENVISAKSVDDSITEAPHANSDVKCFSEDEKVNEVSKDDDSVESSAEEINES 348
BLAST of PI0021382 vs. NCBI nr
Match:
XP_031740824.1 (midasin-like [Cucumis sativus])
HSP 1 Score: 204.9 bits (520), Expect = 7.4e-49
Identity = 161/357 (45.10%), Postives = 178/357 (49.86%), Query Frame = 0
Query: 1 MALNTPSLPGSQRRTAAASSV----DFQITVDDQKE------------------------ 60
MAL TPSLPGS+RRTAAASS DFQ+TVDDQKE
Sbjct: 109 MALTTPSLPGSRRRTAAASSACKKFDFQMTVDDQKEDKDMDQKKKEIENTPAVPKSQKRV 168
Query: 61 ----------------------------RIAGEEHGELEFGGDEKMGPITVHMSFEDMPS 120
R+ + L GDEKM PITVHM F+DMP
Sbjct: 169 VGASTRKRTETKNNGAAEQRVYSTRRSVRLLEKNMESLSLEGDEKMEPITVHMPFDDMPK 228
Query: 121 ------------------------------------------------------------ 180
Sbjct: 229 ISEPMKENMELETESKKTDESKSKLDENLSVEVDDGEKNEMGSEVKLSEEEPEMVLDDLL 288
Query: 181 ------------------------------SSDEELNEASKDDDSLAISAEEINGSDKSS 206
S DE++NE SKDDDS+ ISAEEIN SDKSS
Sbjct: 289 KSFDENVISAKSVDDSKIEAPHANSDVKCFSEDEKVNEVSKDDDSVEISAEEINESDKSS 348
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3CT90 | 2.9e-59 | 48.27 | probable beta-tubulin polyglutamylase OS=Cucumis melo OX=3656 GN=LOC103504683 PE... | [more] |
A0A5A7UN97 | 1.0e-56 | 46.93 | Putative beta-tubulin polyglutamylase OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
A0A6J1ELB4 | 5.4e-21 | 40.52 | uncharacterized protein LOC111435613 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1ESK4 | 1.6e-20 | 39.93 | uncharacterized protein LOC111435613 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1HZT2 | 6.6e-19 | 36.91 | uncharacterized protein LOC111469129 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
Match Name | E-value | Identity | Description | |
XP_008467303.1 | 6.0e-59 | 48.27 | PREDICTED: probable beta-tubulin polyglutamylase [Cucumis melo] | [more] |
KAA0055115.1 | 2.1e-56 | 46.93 | putative beta-tubulin polyglutamylase [Cucumis melo var. makuwa] | [more] |
XP_011654865.2 | 6.2e-56 | 47.99 | probable serine/threonine-protein kinase kinX isoform X2 [Cucumis sativus] >KAE8... | [more] |
XP_031742149.1 | 1.8e-55 | 47.48 | probable serine/threonine-protein kinase kinX isoform X1 [Cucumis sativus] | [more] |
XP_031740824.1 | 7.4e-49 | 45.10 | midasin-like [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |