PI0021268 (gene) Melon (PI 482460) v1

Overview


Name	PI0021268
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	F-box domain-containing protein
Location	chr01: 5828602 .. 5828961 (+)
RNA-Seq Expression	PI0021268
Synteny	PI0021268

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGAACTACCGGCGGATTGTGTTGGTCAGATTTTGGCCTTTACGTCGTTGAAAGATGTTTGTAGATTGGCTGGAGTTTCGTCAGTGTTCAGATCAGCGTCTGATTCAAATTTTGTGTGGAAGAATTTTGTGCCGGTGAATTACAAAGAGATTATTATTGCATCATCTGCTTCCTCCTTCTGTTCGTTTCTAAATTCACTGTTGAAGAAGCCTCTCTATATAGGCACAGGAAACAACTCGGTAGTCTTCTTCTTCTTCTTCTTCTTATTATTATTATTGAGTTGGTTAGCTAATTTAATTGAATTTTTGAGGAAAAAAAACAGGGTCTTATTTTGGATAAACAAAGTGAGAGATTAA

mRNA sequence

ATGAATGAACTACCGGCGGATTGTGTTGGTCAGATTTTGGCCTTTACGTCGTTGAAAGATGTTTGTAGATTGGCTGGAGTTTCGTCAGTGTTCAGATCAGCGTCTGATTCAAATTTTGTGTGGAAGAATTTTGTGCCGGTGAATTACAAAGAGATTATTATTGCATCATCTGCTTCCTCCTTCTGTTCGTTTCTAAATTCACTGTTGAAGAAGCCTCTCTATATAGGCACAGGAAACAACTCGGTAGTCTTCTTCTTCTTCTTCTTCTTATTATTATTATTGAGTTGGTTAGCTAATTTAATTGAATTTTTGAGGAAAAAAAACAGGGTCTTATTTTGGATAAACAAAGTGAGAGATTAA

Coding sequence (CDS)

ATGAATGAACTACCGGCGGATTGTGTTGGTCAGATTTTGGCCTTTACGTCGTTGAAAGATGTTTGTAGATTGGCTGGAGTTTCGTCAGTGTTCAGATCAGCGTCTGATTCAAATTTTGTGTGGAAGAATTTTGTGCCGGTGAATTACAAAGAGATTATTATTGCATCATCTGCTTCCTCCTTCTGTTCGTTTCTAAATTCACTGTTGAAGAAGCCTCTCTATATAGGCACAGGAAACAACTCGGTAGTCTTCTTCTTCTTCTTCTTCTTATTATTATTATTGAGTTGGTTAGCTAATTTAATTGAATTTTTGAGGAAAAAAAACAGGGTCTTATTTTGGATAAACAAAGTGAGAGATTAA

Protein sequence

MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLYIGTGNNSVVFFFFFFLLLLLSWLANLIEFLRKKNRVLFWINKVRD

Homology

[Close]

BLAST of PI0021268 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.2e-10
Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 0


Query: 1   MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASS 60
           +++LP +CV  I++FTS +D C LA VS  F SA  S+ VW+ F+P  Y+ +I  S A  
Sbjct: 36  LDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRAFK 95

Query: 61  FCSFLNSLLKKPLYIGTGNNSVV 84
           F S      KK LY    + SV+
Sbjct: 96  FLS------KKELYFALCDKSVL 112

[Close]

BLAST of PI0021268 vs. ExPASy Swiss-Prot
Match: Q949S5 (F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.0e-09
Identity = 26/49 (53.06%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 1  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNY 50
          MN LP DC+ +IL+ T+  DVCRL+ VSS+FRSA+ S+ VW +F+P ++
Sbjct: 1  MNNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADF 49

[Close]

BLAST of PI0021268 vs. ExPASy Swiss-Prot
Match: Q9FV02 (F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 9.0e-09
Identity = 32/83 (38.55%), Postives = 46/83 (55.42%), Query Frame = 0


Query: 1   MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSA-S 60
           ++ LP  C+  I++FTS +D C  A VS +F SA  S+ VW+ F+P +Y+ +I  S   S
Sbjct: 24  LDSLPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFLPTDYESLITPSRVFS 83

Query: 61  SFCSFLNSLLKKPLYIGTGNNSV 83
           S      SL   PL I  G  S+
Sbjct: 84  SKKELYFSLCNDPLLIEDGKMSL 106

[Close]

BLAST of PI0021268 vs. ExPASy Swiss-Prot
Match: Q6NPT8 (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-08
Identity = 27/80 (33.75%), Postives = 48/80 (60.00%), Query Frame = 0


Query: 4   LPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCS 63
           LP DC+ ++++ TS +D C +A VS   +SA+ S+ VW+ F+P  Y  +++ S+      
Sbjct: 35  LPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQSA------ 94

Query: 64  FLNSLLKKPLYIGTGNNSVV 84
             N L KK +++   +NSV+
Sbjct: 95  --NHLSKKEIFLSLADNSVL 106

[Close]

BLAST of PI0021268 vs. ExPASy Swiss-Prot
Match: Q9FLU7 (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.4e-08
Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 3  ELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFC 62
          +LP +C+  +++FTS  D CR++ VS + RSA+DSN  W+ F+P +Y+ + I +S S F 
Sbjct: 5  DLPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYR-MYIDNSLSRFS 64

Query: 63 S---FLNSLLKKPLYIGTGNNS 82
          +   FL    + PL I  G  S
Sbjct: 65 NKQLFLR-FCESPLLIEDGRTS 84

[Close]

BLAST of PI0021268 vs. ExPASy TrEMBL
Match: A0A5A7ST40 (Putative F-box protein PP2-B12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold142G00330 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.5e-38
Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 0


Query: 1  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASS 60
          MNELPA+CVG+ILAFTSLKDVCRLAGVSSVFRSA+DS+FVWKNFVPVNYKEIII SSASS
Sbjct: 1  MNELPAECVGRILAFTSLKDVCRLAGVSSVFRSAADSDFVWKNFVPVNYKEIIITSSASS 60

Query: 61 FCSFLNSLLKKPLYIGTGNNSVVFFFFFFLLL 93
          FCSFLN LLKKPLYIGTGN SV+FFFFFF LL
Sbjct: 61 FCSFLNFLLKKPLYIGTGNTSVIFFFFFFFLL 92

[Close]

BLAST of PI0021268 vs. ExPASy TrEMBL
Match: A0A0A0K2B9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004170 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.0e-31
Identity = 79/97 (81.44%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWK-NFVPVNYKEIIIA-SSA 60
          MNELPADCVG ILAFTSLKDVCRLAGVSSVFRSA+DS+F+ K NFVPVNYKEIII+ SSA
Sbjct: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60

Query: 61 SSFCSFLNSLLKKPLYIGTGNNSVVFFFFFFLLLLLS 96
          SSFCSFLNSLLKKPLY GT NNSV+FF    LL++ S
Sbjct: 61 SSFCSFLNSLLKKPLYTGTENNSVIFFLLLLLLIISS 97

[Close]

BLAST of PI0021268 vs. ExPASy TrEMBL
Match: A0A0A0L9G5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132530 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.9e-15
Identity = 48/92 (52.17%), Postives = 63/92 (68.48%), Query Frame = 0


Query: 1  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASS 60
          +N+LPA+C+  ILAFTS KD CR A VS  FRSA+DS+ +W  F+P +Y++II  +S+SS
Sbjct: 3  INQLPAECLSCILAFTSPKDACRSAVVSPAFRSAADSDALWTTFLPSDYRQIISQASSSS 62

Query: 61 FCSFLNSLLKKPLY---------IGTGNNSVV 84
            SFLNSL KK LY         IG+GN+  V
Sbjct: 63 TSSFLNSLSKKALYLRLSDHLLFIGSGNSGFV 94

[Close]

BLAST of PI0021268 vs. ExPASy TrEMBL
Match: A0A0A0L445 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132520 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.9e-15
Identity = 47/92 (51.09%), Postives = 62/92 (67.39%), Query Frame = 0


Query: 1  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASS 60
          +N+LPA+C+  ILAFTS KD CR A  S  FRSA+DS+ +W  F+P +Y++II  +S+SS
Sbjct: 3  INQLPAECISSILAFTSPKDACRSAVASPAFRSAADSDAIWTTFLPSDYRQIISQASSSS 62

Query: 61 FCSFLNSLLKKPLY---------IGTGNNSVV 84
            S LNSL KK LY         IG+GN+S V
Sbjct: 63 TSSVLNSLSKKALYFRLSDHLLFIGSGNSSFV 94

[Close]

BLAST of PI0021268 vs. ExPASy TrEMBL
Match: A0A6J1BT05 (putative F-box protein PP2-B12 OS=Momordica charantia OX=3673 GN=LOC111005495 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 5.1e-15
Identity = 42/74 (56.76%), Postives = 56/74 (75.68%), Query Frame = 0


Query: 1  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASS 60
          M+ LPADC+ +I+AFTS KD+C  A VSS FRSA++SN +WK F+P +Y+EII  + +SS
Sbjct: 1  MDRLPADCISRIMAFTSPKDICSSAAVSSAFRSAAESNTLWKTFLPADYREIIAQAPSSS 60

Query: 61 FCSFLNSLLKKPLY 75
            S LNSL +K LY
Sbjct: 61 SSSLLNSLSEKALY 74

[Close]

BLAST of PI0021268 vs. NCBI nr
Match: KAA0033778.1 (putative F-box protein PP2-B12 [Cucumis melo var. makuwa])

HSP 1 Score: 168.7 bits (426), Expect = 3.0e-38
Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 0


Query: 1  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASS 60
          MNELPA+CVG+ILAFTSLKDVCRLAGVSSVFRSA+DS+FVWKNFVPVNYKEIII SSASS
Sbjct: 1  MNELPAECVGRILAFTSLKDVCRLAGVSSVFRSAADSDFVWKNFVPVNYKEIIITSSASS 60

Query: 61 FCSFLNSLLKKPLYIGTGNNSVVFFFFFFLLL 93
          FCSFLN LLKKPLYIGTGN SV+FFFFFF LL
Sbjct: 61 FCSFLNFLLKKPLYIGTGNTSVIFFFFFFFLL 92

[Close]

BLAST of PI0021268 vs. NCBI nr
Match: KGN43164.1 (hypothetical protein Csa_020481 [Cucumis sativus])

HSP 1 Score: 146.0 bits (367), Expect = 2.1e-31
Identity = 79/97 (81.44%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 1  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWK-NFVPVNYKEIIIA-SSA 60
          MNELPADCVG ILAFTSLKDVCRLAGVSSVFRSA+DS+F+ K NFVPVNYKEIII+ SSA
Sbjct: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60

Query: 61 SSFCSFLNSLLKKPLYIGTGNNSVVFFFFFFLLLLLS 96
          SSFCSFLNSLLKKPLY GT NNSV+FF    LL++ S
Sbjct: 61 SSFCSFLNSLLKKPLYTGTENNSVIFFLLLLLLIISS 97

[Close]

BLAST of PI0021268 vs. NCBI nr
Match: XP_004134378.3 (putative F-box protein PP2-B12 [Cucumis sativus] >KAE8650310.1 hypothetical protein Csa_010742 [Cucumis sativus])

HSP 1 Score: 93.6 bits (231), Expect = 1.2e-15
Identity = 48/92 (52.17%), Postives = 63/92 (68.48%), Query Frame = 0


Query: 1  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASS 60
          +N+LPA+C+  ILAFTS KD CR A  S  FRSA+DS+ +W  F+P +Y++II  +S+SS
Sbjct: 3  INQLPAECISSILAFTSPKDACRSAVASPAFRSAADSDAIWTTFLPSDYRQIISQASSSS 62

Query: 61 FCSFLNSLLKKPLY---------IGTGNNSVV 84
            SFLNSL KK LY         IG+GN+S V
Sbjct: 63 TSSFLNSLSKKALYFRLSDHLLFIGSGNSSFV 94

[Close]

BLAST of PI0021268 vs. NCBI nr
Match: XP_004134006.3 (putative F-box protein PP2-B12 [Cucumis sativus] >KAE8650309.1 hypothetical protein Csa_010159 [Cucumis sativus])

HSP 1 Score: 91.3 bits (225), Expect = 6.2e-15
Identity = 48/92 (52.17%), Postives = 63/92 (68.48%), Query Frame = 0


Query: 1  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASS 60
          +N+LPA+C+  ILAFTS KD CR A  S  FRSA+DS+ +W  F+P +Y++II  +S+SS
Sbjct: 3  INQLPAECLSSILAFTSPKDACRSAVASPAFRSAADSDALWITFLPSDYRQIISQASSSS 62

Query: 61 FCSFLNSLLKKPLY---------IGTGNNSVV 84
            SFLNSL KK LY         IG+GN+S V
Sbjct: 63 TSSFLNSLSKKALYFRLSDHLLFIGSGNSSFV 94

[Close]

BLAST of PI0021268 vs. NCBI nr
Match: XP_038905036.1 (LOW QUALITY PROTEIN: putative F-box protein PP2-B12 [Benincasa hispida])

HSP 1 Score: 91.3 bits (225), Expect = 6.2e-15
Identity = 47/90 (52.22%), Postives = 61/90 (67.78%), Query Frame = 0


Query: 1  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASS 60
          +N+LP +C+  ILAFTS KD CR A VS  FRSA DS+ +W NF+P +Y++II  +S+SS
Sbjct: 3  INQLPVECISSILAFTSPKDACRSAAVSPAFRSAVDSDALWTNFLPSDYQQIISQASSSS 62

Query: 61 FCSFLNSLLKKPLY---------IGTGNNS 82
             FLNSL KK LY         IG+GN+S
Sbjct: 63 SSLFLNSLSKKALYFHLCDHLLFIGSGNSS 92

[Close]

BLAST of PI0021268 vs. TAIR 10
Match: AT2G02340.1 (phloem protein 2-B8 )

HSP 1 Score: 65.1 bits (157), Expect = 4.4e-11
Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 0


Query: 1   MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASS 60
           +++LP +CV  I++FTS +D C LA VS  F SA  S+ VW+ F+P  Y+ +I  S A  
Sbjct: 36  LDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRAFK 95

Query: 61  FCSFLNSLLKKPLYIGTGNNSVV 84
           F S      KK LY    + SV+
Sbjct: 96  FLS------KKELYFALCDKSVL 112

[Close]

BLAST of PI0021268 vs. TAIR 10
Match: AT1G80110.1 (phloem protein 2-B11 )

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-10
Identity = 26/49 (53.06%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 1  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNY 50
          MN LP DC+ +IL+ T+  DVCRL+ VSS+FRSA+ S+ VW +F+P ++
Sbjct: 1  MNNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADF 49

[Close]

BLAST of PI0021268 vs. TAIR 10
Match: AT2G02230.1 (phloem protein 2-B1 )

HSP 1 Score: 60.8 bits (146), Expect = 8.3e-10
Identity = 27/80 (33.75%), Postives = 48/80 (60.00%), Query Frame = 0


Query: 4   LPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCS 63
           LP DC+ ++++ TS +D C +A VS   +SA+ S+ VW+ F+P  Y  +++ S+      
Sbjct: 35  LPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQSA------ 94

Query: 64  FLNSLLKKPLYIGTGNNSVV 84
             N L KK +++   +NSV+
Sbjct: 95  --NHLSKKEIFLSLADNSVL 106

[Close]

BLAST of PI0021268 vs. TAIR 10
Match: AT1G56240.1 (phloem protein 2-B13 )

HSP 1 Score: 59.3 bits (142), Expect = 2.4e-09
Identity = 30/57 (52.63%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 1  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASS 58
          M  LP  CV  ILAFTS  D    + VSSVFR A DS+FVW+ F+P +YK +I  S+
Sbjct: 1  MMMLPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKSLISQST 57

[Close]

BLAST of PI0021268 vs. TAIR 10
Match: AT5G24560.1 (phloem protein 2-B12 )

HSP 1 Score: 59.3 bits (142), Expect = 2.4e-09
Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 3  ELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFC 62
          +LP +C+  +++FTS  D CR++ VS + RSA+DSN  W+ F+P +Y+ + I +S S F 
Sbjct: 5  DLPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYR-MYIDNSLSRFS 64

Query: 63 S---FLNSLLKKPLYIGTGNNS 82
          +   FL    + PL I  G  S
Sbjct: 65 NKQLFLR-FCESPLLIEDGRTS 84

The following BLAST results are available for this feature:

BLAST of PI0021268 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVQ8	6.2e-10	40.96	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]
Q949S5	4.0e-09	53.06	F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1	[more]
Q9FV02	9.0e-09	38.55	F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2	[more]
Q6NPT8	1.2e-08	33.75	F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1	[more]
Q9FLU7	3.4e-08	39.02	Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV...	[more]

BLAST of PI0021268 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7ST40	1.5e-38	90.22	Putative F-box protein PP2-B12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A0A0K2B9	1.0e-31	81.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004170 PE=4 SV=1	[more]
A0A0A0L9G5	3.9e-15	52.17	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132530 PE=4 ...	[more]
A0A0A0L445	3.9e-15	51.09	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132520 PE=4 ...	[more]
A0A6J1BT05	5.1e-15	56.76	putative F-box protein PP2-B12 OS=Momordica charantia OX=3673 GN=LOC111005495 PE...	[more]

BLAST of PI0021268 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033778.1	3.0e-38	90.22	putative F-box protein PP2-B12 [Cucumis melo var. makuwa]	[more]
KGN43164.1	2.1e-31	81.44	hypothetical protein Csa_020481 [Cucumis sativus]	[more]
XP_004134378.3	1.2e-15	52.17	putative F-box protein PP2-B12 [Cucumis sativus] >KAE8650310.1 hypothetical prot...	[more]
XP_004134006.3	6.2e-15	52.17	putative F-box protein PP2-B12 [Cucumis sativus] >KAE8650309.1 hypothetical prot...	[more]
XP_038905036.1	6.2e-15	52.22	LOW QUALITY PROTEIN: putative F-box protein PP2-B12 [Benincasa hispida]	[more]

BLAST of PI0021268 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02340.1	4.4e-11	40.96	phloem protein 2-B8	[more]
AT1G80110.1	2.9e-10	53.06	phloem protein 2-B11	[more]
AT2G02230.1	8.3e-10	33.75	phloem protein 2-B1	[more]
AT1G56240.1	2.4e-09	52.63	phloem protein 2-B13	[more]
AT5G24560.1	2.4e-09	39.02	phloem protein 2-B12	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 4..44 e-value: 1.3E-4 score: 31.4
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 3..44 e-value: 1.2E-5 score: 25.0
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 1..44 score: 10.080346
None	No IPR available	GENE3D	1.20.1280.50		coord: 1..75 e-value: 1.6E-6 score: 29.8
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 2..75
None	No IPR available	PANTHER	PTHR32278:SF71	SUBFAMILY NOT NAMED	coord: 2..75
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 2..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021268.1	PI0021268.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding